RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 MED12Q93074 2177 aa9.38□□□□□ -0.91
CHD2-205ENST00000625662 CUL9Q8IWT3 2517 aa9.38□□□□□ -0.91
CHD2-205ENST00000625662 FSTL3O95633 263 aa9.38□□□□□ -0.91
CHD2-205ENST00000625662 TMEM258P61165 79 aa9.38□□□□□ -0.91
CHD2-205ENST00000625662 RASL11AQ6T310 242 aa9.38□□□□□ -0.91
CHD2-205ENST00000625662 TMEM256Q8N2U0 113 aa9.38□□□□□ -0.91
CHD2-205ENST00000625662 ZNRD1Q9P1U0 126 aa9.38□□□□□ -0.91
CHD2-205ENST00000625662 ACACBO00763 2458 aa9.38□□□□□ -0.91
CHD2-205ENST00000625662 TNFRSF13BO14836 293 aaPredicted RBP9.38□□□□□ -0.91
CHD2-205ENST00000625662 NDUFA11Q86Y39 141 aa9.38□□□□□ -0.91
CHD2-205ENST00000625662 C14orf144Q96I85 54 aa9.38□□□□□ -0.91
CHD2-205ENST00000625662 CACNA1DQ01668 2161 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 SCO2A0A1W2PP80 73 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 IGLV3-1P01715 115 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 SRIP30626 198 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 GAGE1Q13065 139 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 KLK15Q9H2R5 256 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 HOXD3P31249 432 aaPredicted RBP9.37□□□□□ -0.91
CHD2-205ENST00000625662 GAGE13Q4V321 117 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 ZNF114Q8NC26 417 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 NPBQ8NG41 125 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 CST9LQ9H4G1 147 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 OSTCQ9NRP0 149 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 IZUMO1RA6ND01 250 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 C19orf84I3L1E1 186 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 IGHV4-31P0DP07 118 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 GAGE2AQ6NT46 116 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 XCL2Q9UBD3 114 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 SMAD5-AS1Q9Y6J3 95 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 SCN8AQ9UQD0 1980 aa9.37□□□□□ -0.91
CHD2-205ENST00000625662 A8MWV9 139 aa9.36□□□□□ -0.91
CHD2-205ENST00000625662 NXT2Q9NPJ8 142 aaKnown RBP9.36□□□□□ -0.91
CHD2-205ENST00000625662 TOMM7Q9P0U1 55 aa9.36□□□□□ -0.91
CHD2-205ENST00000625662 TRACP01848 142 aa9.36□□□□□ -0.91
CHD2-205ENST00000625662 DUX4L9Q6RFH8 374 aaPredicted RBP9.36□□□□□ -0.91
CHD2-205ENST00000625662 GNG5P63218 68 aa9.36□□□□□ -0.91
CHD2-205ENST00000625662 KRTAP27-1Q3LI81 207 aa9.36□□□□□ -0.91
CHD2-205ENST00000625662 SRSF1Q07955 248 aaKnown RBP eCLIP9.36□□□□□ -0.914e-6■■■■□ 21.3
CHD2-205ENST00000625662 FOXI2Q6ZQN5 318 aa9.36□□□□□ -0.91
CHD2-205ENST00000625662 IGKV2-40A0A087WW87 121 aaPredicted RBP9.35□□□□□ -0.91
CHD2-205ENST00000625662 DNAJC9-AS1A6NH13 148 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 IGKV2D-40P01614 121 aaPredicted RBP9.35□□□□□ -0.91
CHD2-205ENST00000625662 TMEM131Q92545 1883 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 RBMY1BA6NDE4 496 aaKnown RBP9.35□□□□□ -0.91
CHD2-205ENST00000625662 RBMY1EA6NEQ0 496 aaKnown RBP9.35□□□□□ -0.91
CHD2-205ENST00000625662 C15orf62A8K5M9 175 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 TCRAP04437 139 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 RBMY1DP0C7P1 496 aaKnown RBP9.35□□□□□ -0.91
CHD2-205ENST00000625662 RBMY1A1P0DJD3 496 aaKnown RBP9.35□□□□□ -0.91
CHD2-205ENST00000625662 RBMY1CP0DJD4 496 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 LINC01559Q495D7 138 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 GAGE12BA1L429 117 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.35□□□□□ -0.91
CHD2-205ENST00000625662 ATP5G3P48201 142 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 TMEM170BQ5T4T1 132 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 RNF152Q8N8N0 203 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 J3KT08 172 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 DNAL4O96015 105 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 FXYD7P58549 80 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 C8orf86Q6ZUL3 223 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 WFDC11Q8NEX6 87 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 POLEQ07864 2286 aa9.35□□□□□ -0.91
CHD2-205ENST00000625662 B5MCH6 92 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.34□□□□□ -0.91
CHD2-205ENST00000625662 TCF23Q7RTU1 214 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 C4orf3Q8WVX3 66 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 MBD6Q96DN6 1003 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 TRAV5A0A0B4J249 113 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 SH2D6Q7Z4S9 175 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 SMPXQ9UHP9 88 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 GTF3C1Q12789 2109 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 SS18Q15532 418 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 RSPO1Q2MKA7 263 aaPredicted RBP9.34□□□□□ -0.91
CHD2-205ENST00000625662 OR11H2Q8NH07 326 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 WFDC12Q8WWY7 111 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 HERV-K104P63124 156 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 HSD52Q0P140 79 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 GUSBP1Q15486 140 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 C11orf53Q8IXP5 236 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 PGPEP1Q9NXJ5 209 aa9.34□□□□□ -0.91
CHD2-205ENST00000625662 INAFM1C9JVW0 142 aa9.33□□□□□ -0.92
CHD2-205ENST00000625662 CD28P10747 220 aa9.33□□□□□ -0.92
CHD2-205ENST00000625662 DENND4CQ5VZ89 1909 aa9.33□□□□□ -0.92
CHD2-205ENST00000625662 PGPEP1LA6NFU8 196 aa9.33□□□□□ -0.92
CHD2-205ENST00000625662 PPIFP30405 207 aaKnown RBP9.33□□□□□ -0.92
CHD2-205ENST00000625662 SIRPDQ9H106 197 aa9.33□□□□□ -0.92
CHD2-205ENST00000625662 ATP5L2Q7Z4Y8 100 aa9.33□□□□□ -0.92
CHD2-205ENST00000625662 HIVEP2P31629 2446 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 IGHV1OR15-1A0A075B7D0 117 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 TRAV8-1A0A0A6YYK1 113 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 GZMBP10144 247 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 IFITM1P13164 125 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 PCNX1Q96RV3 2341 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 MPDZO75970 2070 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 IGHV3-53P01767 116 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 DOCK7Q96N67 2140 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 SLC25A20O43772 301 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 LY6G6DO95868 133 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 TMEM126AQ9H061 195 aa9.32□□□□□ -0.92
CHD2-205ENST00000625662 SNRNP200O75643 2136 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms