RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 PRR15Q8IV56 129 aa0.48□□□□□ -2.33
SCARNA4-202ENST00000625402 IFT20Q8IY31 132 aa0.48□□□□□ -2.33
SCARNA4-202ENST00000625402 LINC00269Q8N2A0 174 aa0.48□□□□□ -2.33
SCARNA4-202ENST00000625402 PLPP5Q8NEB5 264 aa0.48□□□□□ -2.33
SCARNA4-202ENST00000625402 OR10AG1Q8NH19 301 aa0.48□□□□□ -2.33
SCARNA4-202ENST00000625402 OR2H1Q9GZK4 316 aa0.48□□□□□ -2.33
SCARNA4-202ENST00000625402 MAP1LC3BQ9GZQ8 125 aa0.48□□□□□ -2.33
SCARNA4-202ENST00000625402 NIT2Q9NQR4 276 aa0.48□□□□□ -2.33
SCARNA4-202ENST00000625402 NUBP2Q9Y5Y2 271 aa0.48□□□□□ -2.33
SCARNA4-202ENST00000625402 PHRF1Q9P1Y6 1649 aaKnown RBP0.48□□□□□ -2.33
SCARNA4-202ENST00000625402 MYLKQ15746 1914 aa0.48□□□□□ -2.33
SCARNA4-202ENST00000625402 PEAK1Q9H792 1746 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 IGLV3-32A0A0A0MS00 114 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 A0A1W2PRE2 83 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 JMJD7-PLA2G4BH0Y9G9 81 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 H3BQV1 296 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 PPYP01298 95 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 IFNA4P05014 189 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 RPL35P42766 123 aaKnown RBP0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 FOXI2Q6ZQN5 318 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 ZCCHC23Q6ZST2 131 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 ZNF431Q8TF32 576 aaPredicted RBP0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 DIRC1Q969H9 104 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 PCBD2Q9H0N5 130 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 FRMPD1Q5SYB0 1578 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 TENM3Q9P273 2699 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 TECPR2O15040 1411 aa0.47□□□□□ -2.33
SCARNA4-202ENST00000625402 TRPM1Q7Z4N2 1603 aa0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 TRAV23DV6A0A075B6W5 121 aa0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 TRDV1A0A1B0GX56 115 aa0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 GABARAPH6UMI1 98 aa0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 FABP1P07148 127 aa0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 CD14P08571 375 aa0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 PRB4P10163 310 aaPredicted RBP0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 FXYD4P59646 89 aa0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 VBP1P61758 197 aa0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 DIAPH2-AS1Q14236 149 aa0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 HRCT1Q6UXD1 115 aa0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 CCL4L1Q8NHW4 92 aa0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 RMND5BQ96G75 393 aaPredicted RBP0.46□□□□□ -2.34
SCARNA4-202ENST00000625402 RTL9Q8NET4 1388 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 PTPRDP23468 1912 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 KPNA4O00629 521 aaPredicted RBP0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 LYRM1O43325 122 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 IGLV3-1P01715 115 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 IGHV3-33P01772 117 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 MT-ND6P03923 174 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 S100A11P31949 105 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 CIRBPQ14011 172 aaKnown RBP0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 STX12Q86Y82 276 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 OR10AC1Q8NH08 325 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 LIMD2Q9BT23 127 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 LAMTOR3Q9UHA4 124 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 SMPXQ9UHP9 88 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 NUP210Q8TEM1 1887 aaPredicted RBP0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 SYNMO15061 1565 aa0.45□□□□□ -2.34
SCARNA4-202ENST00000625402 NISCHQ9Y2I1 1504 aa0.44□□□□□ -2.34
SCARNA4-202ENST00000625402 A0A1W2PPM0 123 aa0.44□□□□□ -2.34
SCARNA4-202ENST00000625402 FABP2P12104 132 aa0.44□□□□□ -2.34
SCARNA4-202ENST00000625402 VMA21Q3ZAQ7 101 aa0.44□□□□□ -2.34
SCARNA4-202ENST00000625402 SPATA45Q537H7 98 aa0.44□□□□□ -2.34
SCARNA4-202ENST00000625402 ISOC1Q96CN7 298 aa0.44□□□□□ -2.34
SCARNA4-202ENST00000625402 OR4C12Q96R67 309 aa0.44□□□□□ -2.34
SCARNA4-202ENST00000625402 CST11Q9H112 138 aa0.44□□□□□ -2.34
SCARNA4-202ENST00000625402 YTHDC2Q9H6S0 1430 aaKnown RBP0.44□□□□□ -2.34
SCARNA4-202ENST00000625402 ASH1LQ9NR48 2969 aaKnown RBP0.44□□□□□ -2.34
SCARNA4-202ENST00000625402 CAMSAP2Q08AD1 1489 aa0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 A0A096LPI6 279 aa0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 BCL2P10415 239 aa0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 FABP4P15090 132 aa0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 RPL7P18124 248 aaKnown RBP0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 MRPS36P82909 103 aaKnown RBP0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 OCIAD2Q56VL3 154 aa0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 NABP2Q9BQ15 211 aa0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 FKBP11Q9NYL4 201 aa0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 TPRKBQ9Y3C4 175 aa0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 HMCN1Q96RW7 5635 aa0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 ROCK1Q13464 1354 aa0.43□□□□□ -2.34
SCARNA4-202ENST00000625402 BCL9O00512 1426 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 A0A0J9YY99 117 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 SDC2P34741 201 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 FOXA3P55318 350 aaPredicted RBP0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 LINC00575Q6W349 94 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 CROCCP2Q86T23 111 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 TEX29Q8N6K0 151 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 OR5H6Q8NGV6 325 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 THEM6Q8WUY1 208 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 EFCAB11Q9BUY7 163 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 CCDC32Q9BV29 185 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 TCEAL2Q9H3H9 227 aaPredicted RBP0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 ATPIF1Q9UII2 106 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 TRAPPC2LQ9UL33 140 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 APCP25054 2843 aa0.42□□□□□ -2.34
SCARNA4-202ENST00000625402 ERBINQ96RT1 1412 aa0.41□□□□□ -2.34
SCARNA4-202ENST00000625402 TRAPPC8Q9Y2L5 1435 aa0.41□□□□□ -2.34
SCARNA4-202ENST00000625402 A0A0D9SG42 100 aa0.41□□□□□ -2.34
SCARNA4-202ENST00000625402 K7EIL1 84 aa0.41□□□□□ -2.34
SCARNA4-202ENST00000625402 PGRMC1O00264 195 aaKnown RBP0.41□□□□□ -2.34
SCARNA4-202ENST00000625402 POLR2HP52434 150 aaKnown RBP0.41□□□□□ -2.34
SCARNA4-202ENST00000625402 LINC00305Q7Z4B0 112 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms