RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 NPFFO15130 113 aa9.3□□□□□ -0.92
TP53-227ENST00000622645 Q8TAT8 98 aa9.3□□□□□ -0.92
TP53-227ENST00000622645 ZNF502Q8TBZ5 544 aa9.3□□□□□ -0.92
TP53-227ENST00000622645 NDFIP1Q9BT67 221 aa9.3□□□□□ -0.92
TP53-227ENST00000622645 CENPVL3A0A0U1RRI6 287 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 IGHV4-39P01824 125 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 IGHG4P01861 327 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 BTF3P20290 206 aaKnown RBP9.29□□□□□ -0.92
TP53-227ENST00000622645 LINC00173Q6ZV60 143 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 SPATA12Q7Z6I5 190 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 TMEM190Q8WZ59 177 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 TXN2Q99757 166 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 VGLL1Q99990 258 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 TMEM208Q9BTX3 173 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 PKD1L2Q7Z442 2459 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 IGHV1-24A0A0C4DH33 117 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 IGHV3-66A0A0C4DH42 116 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 SCGB2A1O75556 95 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 CSN3P07498 182 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 LINC00614P0C842 121 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 TFPI2P48307 235 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 RELQ04864 619 aaPredicted RBP9.29□□□□□ -0.92
TP53-227ENST00000622645 TMEM219Q86XT9 240 aa9.29□□□□□ -0.92
TP53-227ENST00000622645 IGHV3OR16-13A0A075B7E8 117 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 IGHV3-74A0A0B4J1X5 117 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 MUC21A0A0G2JKD1 596 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 MUC21A0A140T8X8 626 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 IGLC3P0DOY3 106 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 RIGQ13278 110 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 MUC21Q5SSG8 566 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 CLEC19AQ6UXS0 136 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 SH2D1AO60880 128 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 CYB5R2Q6BCY4 276 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 CCDC140Q96MF4 163 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 PRR25Q96S07 402 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 UQCR10Q9UDW1 63 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 Q6ZN92 141 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 CHCHD1Q96BP2 118 aaKnown RBP9.28□□□□□ -0.92
TP53-227ENST00000622645 ZFAND3Q9H8U3 227 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 LINC00527Q9UJ94 153 aa9.28□□□□□ -0.92
TP53-227ENST00000622645 TMEM189A5PLL7 270 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 DLEU1O43261 78 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 ZNF80P51504 273 aaPredicted RBP9.27□□□□□ -0.93
TP53-227ENST00000622645 FAM162BQ5T6X4 162 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 LYZL1Q6UWQ5 148 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 BRD3OSQ6XYD6 125 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 SPG11Q96JI7 2443 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 IGHV3-49A0A0A0MS15 119 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 SERTM2A0A1B0GWG4 89 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 TMEM213A2RRL7 107 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 BUB3O43684 328 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 NPSP0C0P6 89 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 C5orf56Q8N8D9 126 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 TMEM70Q9BUB7 260 aa9.27□□□□□ -0.93
TP53-227ENST00000622645 PRAC2D3DTV9 90 aa9.26□□□□□ -0.93
TP53-227ENST00000622645 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
TP53-227ENST00000622645 HNRNPA3P51991 378 aaKnown RBP9.26□□□□□ -0.93
TP53-227ENST00000622645 SAPCD1Q5SSQ6 148 aa9.26□□□□□ -0.93
TP53-227ENST00000622645 RNF182Q8N6D2 247 aa9.26□□□□□ -0.93
TP53-227ENST00000622645 TIMM8BQ9Y5J9 83 aaPredicted RBP9.26□□□□□ -0.93
TP53-227ENST00000622645 ABCA2Q9BZC7 2435 aa9.26□□□□□ -0.93
TP53-227ENST00000622645 CLPSL1A2RUU4 121 aa9.26□□□□□ -0.93
TP53-227ENST00000622645 ZNF207O43670 478 aaKnown RBP9.26□□□□□ -0.93
TP53-227ENST00000622645 Q6AWC8 147 aa9.26□□□□□ -0.93
TP53-227ENST00000622645 MAP1AP78559 2803 aaPredicted RBP9.25□□□□□ -0.93
TP53-227ENST00000622645 IGHV4-61A0A0C4DH41 118 aa9.25□□□□□ -0.93
TP53-227ENST00000622645 FOSL1P15407 271 aa9.25□□□□□ -0.93
TP53-227ENST00000622645 ERCC8Q13216 396 aa9.25□□□□□ -0.93
TP53-227ENST00000622645 COL5A1-AS1Q5SY13 56 aa9.25□□□□□ -0.93
TP53-227ENST00000622645 GOLT1BQ9Y3E0 138 aa9.25□□□□□ -0.93
TP53-227ENST00000622645 TRAV9-2A0A087WT02 112 aa9.25□□□□□ -0.93
TP53-227ENST00000622645 GOSR1O95249 250 aa9.25□□□□□ -0.93
TP53-227ENST00000622645 PAX8Q06710 450 aa9.25□□□□□ -0.93
TP53-227ENST00000622645 MCRIP2Q9BUT9 160 aaKnown RBP9.25□□□□□ -0.93
TP53-227ENST00000622645 CFAP46Q8IYW2 2715 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 PIEZO1Q92508 2521 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 SYS1-DBNDD2H3BUS1 97 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 IGLL1P15814 213 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 KLK9Q2XQG4 91 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 COX8CQ7Z4L0 72 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 AMN1Q8IY45 258 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 KLHDC1Q8N7A1 406 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 STPG4Q8N801 248 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 GATD1Q8NB37 220 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 KLK9Q9UKQ9 250 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 TRAV40A0A0B4J280 105 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 A0A1B0GW15 77 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 ZNF575Q86XF7 245 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 PIFOQ8TCI5 191 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 EEF1AKMT3Q96AZ1 226 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 LAMTOR2Q9Y2Q5 125 aa9.24□□□□□ -0.93
TP53-227ENST00000622645 H0Y8G0 127 aa9.23□□□□□ -0.93
TP53-227ENST00000622645 CRXO43186 299 aaPredicted RBP9.23□□□□□ -0.93
TP53-227ENST00000622645 ZNF493Q6ZR52 646 aa9.23□□□□□ -0.93
TP53-227ENST00000622645 ARL6IP6Q8N6S5 226 aa9.23□□□□□ -0.93
TP53-227ENST00000622645 IGHV1-69DA0A0B4J2H0 117 aa9.23□□□□□ -0.93
TP53-227ENST00000622645 OR4C46A6NHA9 309 aa9.23□□□□□ -0.93
TP53-227ENST00000622645 D6R8Y8 96 aa9.23□□□□□ -0.93
TP53-227ENST00000622645 IGHV1-69P01742 117 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms