RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 DAPL1A0PJW8 107 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 OR5H14A6NHG9 310 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 G3V2T6 193 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 H3BUA1 57 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 OR2A4O95047 310 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 OR5AC1P0C628 307 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 TPPP2P59282 170 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 RPS11P62280 158 aaKnown RBP eCLIP3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 FLI1Q01543 452 aaPredicted RBP3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 LINC00322Q6ZN03 302 aaPredicted RBP3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 Q8N402 240 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 ACBD7Q8N6N7 88 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 OR2K2Q8NGT1 345 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 OR5AK2Q8NH90 309 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 LRRC20Q8TCA0 184 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 LGALS14Q8TCE9 139 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 OR2A7Q96R45 310 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 GPER1Q99527 375 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 ZNF251Q9BRH9 671 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 METTL9Q9H1A3 318 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 SPACA1Q9HBV2 294 aa3.28□□□□□ -1.88
LPCAT3-213ENST00000620843 KIAA1109Q2LD37 5005 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 IZUMO1RA6ND01 250 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 J3QLW9 94 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 ATP8B1O43520 1251 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 YPEL1O60688 119 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 BRI3O95415 125 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 CXorf1O96002 111 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 CA2P00918 260 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 IFNA6P05013 189 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 CD2P06729 351 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 GTF2F2P13984 249 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 ZNF93P35789 620 aaPredicted RBP3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 PPP1CCP36873 323 aaKnown RBP3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 SNRPGP62308 76 aaKnown RBP3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 PPP3R1P63098 170 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 HMGN3Q15651 99 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 MORN2Q502X0 79 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 ACTL10Q5JWF8 245 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 ZNF660Q6AZW8 331 aaPredicted RBP3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 STX19Q8N4C7 294 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 OR4K15Q8NH41 348 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 MRPL30Q8TCC3 161 aaKnown RBP3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 NEK7Q8TDX7 302 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 CASTOR1Q8WTX7 329 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 SMIM19Q96E16 107 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 MRPS24Q96EL2 167 aaKnown RBP3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 YPEL2Q96QA6 119 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 OR4C12Q96R67 309 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 TMEM138Q9NPI0 162 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 TRAPPC2LQ9UL33 140 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 NUBP2Q9Y5Y2 271 aa3.27□□□□□ -1.89
LPCAT3-213ENST00000620843 VPS13DQ5THJ4 4388 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 FAT2Q9NYQ8 4349 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 RYR1P21817 5038 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 RAB19A4D1S5 217 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 C9JQL5 133 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 H0Y980 276 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 ITGB1BP1O14713 200 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 SLC22A1O15245 554 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 GYG2O15488 501 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 PDCD6O75340 191 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 RLN2P04090 185 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 CDK1P06493 297 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 PFN1P07737 140 aaKnown RBP3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 HLA-DMAP28067 261 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 RANBP1P43487 201 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 GPR176Q14439 515 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 TNXAQ16473 311 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 CCDC58Q4VC31 144 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 AKIRIN2Q53H80 203 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 ACTBL2Q562R1 376 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 TMEM69Q5SWH9 247 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 XAF1Q6GPH4 301 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 UNQ5815/PRO19632Q6UWF5 114 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 LINC00304Q8N9R0 145 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 ZNF555Q8NEP9 628 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 OR5H2Q8NGV7 314 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 PGLYRP3Q96LB9 341 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 SHANK2-AS3Q9BTD1 123 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 FAM103A1Q9BTL3 118 aaKnown RBP3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 FBXL15Q9H469 300 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 TAF9BQ9HBM6 251 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 OR2S2Q9NQN1 319 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 WASHC3Q9Y3C0 194 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 ABCA13Q86UQ4 5058 aa3.26□□□□□ -1.89
LPCAT3-213ENST00000620843 NUPR2A6NF83 97 aa3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 MCRIP1C9JLW8 97 aa3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 FADS2O95864 444 aaKnown RBP3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 TRGV3P03979 118 aa3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 LIMS3P0CW19 117 aa3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 LIMS4P0CW20 117 aa3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 GTF2A1P52655 376 aaPredicted RBP3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 HLA-DRB3P79483 266 aa3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 DEFA5Q01523 94 aa3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 TMEM267Q0VDI3 215 aaPredicted RBP3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 PLGLAQ15195 96 aa3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 RPL39P5Q59GN2 51 aa3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 RPL22L1Q6P5R6 122 aaKnown RBP3.25□□□□□ -1.89
LPCAT3-213ENST00000620843 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms