RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 NGBQ9NPG2 151 aa11.34□□□□□ -0.59
SYN2-205ENST00000620175 RAXQ9Y2V3 346 aa11.34□□□□□ -0.59
SYN2-205ENST00000620175 PTPRSQ13332 1948 aa11.33□□□□□ -0.59
SYN2-205ENST00000620175 ARHGAP32A7KAX9 2087 aa11.33□□□□□ -0.6
SYN2-205ENST00000620175 VWC2LB2RUY7 222 aa11.33□□□□□ -0.6
SYN2-205ENST00000620175 NPYP01303 97 aa11.33□□□□□ -0.6
SYN2-205ENST00000620175 Q86TA4 180 aa11.33□□□□□ -0.6
SYN2-205ENST00000620175 Q8N7P7 452 aa11.33□□□□□ -0.6
SYN2-205ENST00000620175 A0A1W2PPI3 338 aa11.33□□□□□ -0.6
SYN2-205ENST00000620175 HOXA3O43365 443 aaPredicted RBP11.33□□□□□ -0.6
SYN2-205ENST00000620175 OTORQ9NRC9 128 aa11.33□□□□□ -0.6
SYN2-205ENST00000620175 IGHV1-18A0A0C4DH31 117 aa11.33□□□□□ -0.6
SYN2-205ENST00000620175 C1orf229Q6ZS94 237 aaPredicted RBP11.33□□□□□ -0.6
SYN2-205ENST00000620175 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 F2RL2O00254 374 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 DKK1O94907 266 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 SMIM17P0DL12 118 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 C11orf53Q8IXP5 236 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 SCGB3A1Q96QR1 104 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 AGRNO00468 2067 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 CRYBA4P53673 196 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 TEX29Q8N6K0 151 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 FAM167A-AS1Q96KT0 104 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 MSRB1Q9NZV6 116 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 PTPRQQ9UMZ3 2332 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 B5MCH6 92 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 FOXE3Q13461 319 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 KLF5Q13887 457 aaPredicted RBP11.32□□□□□ -0.6
SYN2-205ENST00000620175 TMEM249Q2WGJ8 235 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 FAM231DQ6ZW35 169 aa11.32□□□□□ -0.6
SYN2-205ENST00000620175 TRAV26-2A0A0B4J265 109 aa11.31□□□□□ -0.6
SYN2-205ENST00000620175 FAM90A9PA6NNJ1 464 aa11.31□□□□□ -0.6
SYN2-205ENST00000620175 TRBV20-1A0A075B6N2 111 aa11.31□□□□□ -0.6
SYN2-205ENST00000620175 TRAV17A0A0B4J275 112 aa11.31□□□□□ -0.6
SYN2-205ENST00000620175 C8orf46Q8TAG6 207 aa11.31□□□□□ -0.6
SYN2-205ENST00000620175 RAX2Q96IS3 184 aa11.31□□□□□ -0.6
SYN2-205ENST00000620175 ZNF815PA8K554 130 aa11.31□□□□□ -0.6
SYN2-205ENST00000620175 EFNA4P52798 201 aa11.31□□□□□ -0.6
SYN2-205ENST00000620175 FDCSPQ8NFU4 85 aa11.31□□□□□ -0.6
SYN2-205ENST00000620175 PTH2Q96A98 100 aa11.31□□□□□ -0.6
SYN2-205ENST00000620175 ZFYVE26Q68DK2 2539 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 PSMB11A5LHX3 300 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 SNCGO76070 127 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 P0C879 139 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 MRPL51Q4U2R6 128 aaKnown RBP11.3□□□□□ -0.6
SYN2-205ENST00000620175 WISP2O76076 250 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 IGHV4-39P01824 125 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 TMPRSS3P57727 454 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 TMEM238LA0A1B0GVL6 79 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 A6NJY4 79 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 MC5RP33032 325 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 FAM74A4Q5TZK3 123 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 LINC01545Q5VT33 79 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 C3orf56Q8N813 242 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 RNF125Q96EQ8 232 aa11.3□□□□□ -0.6
SYN2-205ENST00000620175 MRPL35Q9NZE8 188 aaKnown RBP11.3□□□□□ -0.6
SYN2-205ENST00000620175 SH2D1AO60880 128 aa11.29□□□□□ -0.6
SYN2-205ENST00000620175 NDUFS7O75251 213 aa11.29□□□□□ -0.6
SYN2-205ENST00000620175 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
SYN2-205ENST00000620175 CD59P13987 128 aa11.29□□□□□ -0.6
SYN2-205ENST00000620175 C17orf58Q2M2W7 97 aa11.29□□□□□ -0.6
SYN2-205ENST00000620175 RNF138Q8WVD3 245 aa11.29□□□□□ -0.6
SYN2-205ENST00000620175 C9orf172C9J069 976 aa11.29□□□□□ -0.6
SYN2-205ENST00000620175 IGKV3-15P01624 115 aa11.29□□□□□ -0.6
SYN2-205ENST00000620175 PRR7Q8TB68 274 aa11.29□□□□□ -0.6
SYN2-205ENST00000620175 MBD6Q96DN6 1003 aa11.29□□□□□ -0.6
SYN2-205ENST00000620175 PPP1R27Q86WC6 154 aa11.28□□□□□ -0.6
SYN2-205ENST00000620175 PRR33A8MZF0 331 aa11.28□□□□□ -0.6
SYN2-205ENST00000620175 TMEM78Q5T7P6 136 aa11.28□□□□□ -0.6
SYN2-205ENST00000620175 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.28□□□□□ -0.6
SYN2-205ENST00000620175 GLMPQ8WWB7 406 aa11.28□□□□□ -0.6
SYN2-205ENST00000620175 TRBV25-1A0A075B6N4 114 aa11.28□□□□□ -0.6
SYN2-205ENST00000620175 DLX6P56179 175 aa11.28□□□□□ -0.6
SYN2-205ENST00000620175 LYRM7Q5U5X0 104 aa11.28□□□□□ -0.6
SYN2-205ENST00000620175 FAM104BQ5XKR9 115 aa11.27□□□□□ -0.6
SYN2-205ENST00000620175 Q71RC1 249 aaPredicted RBP11.27□□□□□ -0.6
SYN2-205ENST00000620175 WIPF2Q8TF74 440 aaPredicted RBP11.27□□□□□ -0.6
SYN2-205ENST00000620175 WDFY3Q8IZQ1 3526 aa11.27□□□□□ -0.61
SYN2-205ENST00000620175 GLRXP35754 106 aa11.27□□□□□ -0.61
SYN2-205ENST00000620175 ERCC8Q13216 396 aa11.27□□□□□ -0.61
SYN2-205ENST00000620175 NDUFA4L2Q9NRX3 87 aa11.27□□□□□ -0.61
SYN2-205ENST00000620175 CDX4O14627 284 aaPredicted RBP11.27□□□□□ -0.61
SYN2-205ENST00000620175 INSL3P51460 131 aa11.27□□□□□ -0.61
SYN2-205ENST00000620175 SRSF6Q13247 344 aaKnown RBP11.27□□□□□ -0.61
SYN2-205ENST00000620175 C1orf159Q96HA4 380 aa11.27□□□□□ -0.61
SYN2-205ENST00000620175 URB1-AS1Q96HZ7 61 aa11.27□□□□□ -0.61
SYN2-205ENST00000620175 ATG2AQ2TAZ0 1938 aa11.26□□□□□ -0.61
SYN2-205ENST00000620175 HLA-DMBP28068 263 aa11.26□□□□□ -0.61
SYN2-205ENST00000620175 KRTAP27-1Q3LI81 207 aa11.26□□□□□ -0.61
SYN2-205ENST00000620175 C22orf46C9J442 243 aa11.26□□□□□ -0.61
SYN2-205ENST00000620175 ATP5LO75964 103 aa11.26□□□□□ -0.61
SYN2-205ENST00000620175 IGKV3-20P01619 116 aa11.26□□□□□ -0.61
SYN2-205ENST00000620175 LGALS7P47929 136 aa11.26□□□□□ -0.61
SYN2-205ENST00000620175 ATP5IP56385 69 aaPredicted RBP11.26□□□□□ -0.61
SYN2-205ENST00000620175 NPC2P61916 151 aa11.26□□□□□ -0.61
SYN2-205ENST00000620175 TMEM200BQ69YZ2 307 aa11.26□□□□□ -0.61
SYN2-205ENST00000620175 C16orf54Q6UWD8 224 aa11.26□□□□□ -0.61
SYN2-205ENST00000620175 PHLDA3Q9Y5J5 127 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms