RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 FAM90A2PQ658T7 463 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 UQCC3Q6UW78 93 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 BLNKQ8WV28 456 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 FAM210AQ96ND0 272 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 TCEAL7Q9BRU2 100 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 SLC50A1Q9BRV3 221 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 EIF5A2Q9GZV4 153 aaKnown RBP6.91□□□□□ -1.3
SYN3-213ENST00000619146 NRN1Q9NPD7 142 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 ZNF586Q9NXT0 402 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 MUC4Q99102 2169 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 TRAV2A0A0B4J234 112 aa6.9□□□□□ -1.3
SYN3-213ENST00000619146 LOC102723971A0A1B0GUV8 181 aa6.9□□□□□ -1.3
SYN3-213ENST00000619146 FAM74A7A6NL05 159 aa6.9□□□□□ -1.3
SYN3-213ENST00000619146 RANP62826 216 aaKnown RBP6.9□□□□□ -1.3
SYN3-213ENST00000619146 HAGHQ16775 308 aa6.9□□□□□ -1.3
SYN3-213ENST00000619146 ZNF506Q5JVG8 444 aa6.9□□□□□ -1.3
SYN3-213ENST00000619146 RBPMS2Q6ZRY4 209 aaKnown RBP6.9□□□□□ -1.3
SYN3-213ENST00000619146 COMMD7Q86VX2 200 aa6.9□□□□□ -1.3
SYN3-213ENST00000619146 OR2K2Q8NGT1 345 aa6.9□□□□□ -1.3
SYN3-213ENST00000619146 AAMDCQ9H7C9 122 aa6.9□□□□□ -1.3
SYN3-213ENST00000619146 OTORQ9NRC9 128 aa6.9□□□□□ -1.3
SYN3-213ENST00000619146 MLXQ9UH92 298 aa6.9□□□□□ -1.3
SYN3-213ENST00000619146 PRELID1Q9Y255 219 aa6.9□□□□□ -1.3
SYN3-213ENST00000619146 YTHDF2Q9Y5A9 579 aaKnown RBP6.9□□□□□ -1.3
SYN3-213ENST00000619146 C11orf94C9JXX5 98 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 F6UZH7 168 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 DNASE2O00115 360 aaPredicted RBP6.89□□□□□ -1.31
SYN3-213ENST00000619146 ISLRO14498 428 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 TSPAN4O14817 238 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 PDE6DO43924 150 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 NDUFB4O95168 129 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 ID1P41134 155 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 CSN1S1P47710 185 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 UBE2G2P60604 165 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 MEF2BQ02080 365 aaPredicted RBP6.89□□□□□ -1.31
SYN3-213ENST00000619146 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 EIF4E3Q8N5X7 224 aaKnown RBP6.89□□□□□ -1.31
SYN3-213ENST00000619146 ARL6IP6Q8N6S5 226 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 CMTM2Q8TAZ6 248 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 RXFP4Q8TDU9 374 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 C16orf92Q96LL3 132 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 SPAG8Q99932 426 aaPredicted RBP6.89□□□□□ -1.31
SYN3-213ENST00000619146 Q9H3A6 140 aa6.89□□□□□ -1.31
SYN3-213ENST00000619146 ZNF331Q9NQX6 463 aaPredicted RBP6.89□□□□□ -1.31
SYN3-213ENST00000619146 PGPA6NDG6 321 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 OR4C46A6NHA9 309 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 GGTLC3B5MD39 225 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 H3BTX0 84 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 SNRPCP09234 159 aaKnown RBP6.88□□□□□ -1.31
SYN3-213ENST00000619146 EDN2P20800 178 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 SNRPD3P62318 126 aaKnown RBP6.88□□□□□ -1.31
SYN3-213ENST00000619146 SUMO1P63165 101 aaKnown RBP6.88□□□□□ -1.31
SYN3-213ENST00000619146 ICAM4Q14773 271 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 CD300EQ496F6 205 aaPredicted RBP6.88□□□□□ -1.31
SYN3-213ENST00000619146 TOR2AQ5JU69 321 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 LCN12Q6JVE5 192 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 TMEM61Q8N0U2 210 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 Q8N1Y9 231 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 C5orf17Q8NAS9 161 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 RPUSD4Q96CM3 377 aaKnown RBP6.88□□□□□ -1.31
SYN3-213ENST00000619146 MRPL53Q96EL3 112 aaKnown RBP6.88□□□□□ -1.31
SYN3-213ENST00000619146 C17orf77Q96MU5 243 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 RARRES2Q99969 163 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 MS4A6AQ9H2W1 248 aa6.88□□□□□ -1.31
SYN3-213ENST00000619146 IGKV3-7A0A075B6H7 116 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 SERTM2A0A1B0GWG4 89 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 TMEM250H0YL14 139 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 K7EQG2 157 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 SLC17A3O00476 420 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 SOCS3O14543 225 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 LY6G6CO95867 125 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 IGLV1-51P01701 117 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 SLC25A5P05141 298 aaKnown RBP6.87□□□□□ -1.31
SYN3-213ENST00000619146 CMC4P56277 68 aaPredicted RBP6.87□□□□□ -1.31
SYN3-213ENST00000619146 CCDC28AQ8IWP9 274 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 EXOC3-AS1Q8N2X6 119 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 GBGT1Q8N5D6 347 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 DCANP1Q8TF63 244 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 HIST1H2BAQ96A08 127 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 SPATA25Q9BR10 227 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 TREM1Q9NP99 234 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 EPDR1Q9UM22 224 aa6.87□□□□□ -1.31
SYN3-213ENST00000619146 TRAV8-2A0A0B4J237 113 aa6.86□□□□□ -1.31
SYN3-213ENST00000619146 FBLL1A6NHQ2 334 aaKnown RBP6.86□□□□□ -1.31
SYN3-213ENST00000619146 K7EQM0 130 aa6.86□□□□□ -1.31
SYN3-213ENST00000619146 S100A9P06702 114 aaKnown RBP6.86□□□□□ -1.31
SYN3-213ENST00000619146 ATP5G3P48201 142 aa6.86□□□□□ -1.31
SYN3-213ENST00000619146 CD81P60033 236 aa6.86□□□□□ -1.31
SYN3-213ENST00000619146 GUCA2BQ16661 112 aa6.86□□□□□ -1.31
SYN3-213ENST00000619146 C11orf52Q96A22 123 aa6.86□□□□□ -1.31
SYN3-213ENST00000619146 ATG101Q9BSB4 218 aa6.86□□□□□ -1.31
SYN3-213ENST00000619146 SLC35B3Q9H1N7 401 aa6.86□□□□□ -1.31
SYN3-213ENST00000619146 C19orf73Q9NVV2 129 aa6.86□□□□□ -1.31
SYN3-213ENST00000619146 HERC2O95714 4834 aa6.86□□□□□ -1.31
SYN3-213ENST00000619146 PEX7O00628 323 aa6.85□□□□□ -1.31
SYN3-213ENST00000619146 SRP19P09132 144 aaKnown RBP6.85□□□□□ -1.31
SYN3-213ENST00000619146 TFPI2P48307 235 aa6.85□□□□□ -1.31
SYN3-213ENST00000619146 SRSF3P84103 164 aaKnown RBP6.85□□□□□ -1.31
SYN3-213ENST00000619146 PSG3Q16557 428 aa6.85□□□□□ -1.31
SYN3-213ENST00000619146 WFDC3Q8IUB2 231 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms