RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 P01737 135 aa13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 CYB5R2Q6BCY4 276 aa13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 C9orf139Q6ZV77 190 aa13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 OR5R1Q8NH85 324 aa13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 TSKUQ8WUA8 353 aa13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 NEU1Q99519 415 aa13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 IGHG4P01861 327 aa13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 NUP35Q8NFH5 326 aa13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 DAZAP1Q96EP5 407 aaKnown RBP13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 ZC2HC1AQ96GY0 325 aa13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 ZNF331Q9NQX6 463 aaPredicted RBP13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 CREBBPQ92793 2442 aa13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 ZNF253O75346 499 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 RPL19P84098 196 aaKnown RBP13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 UNQ9165/PRO28630Q6UXU0 137 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 Q6YL49 198 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 GBGT1Q8N5D6 347 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 WFDC11Q8NEX6 87 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 GNB1LQ9BYB4 327 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 ZFP30Q9Y2G7 519 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 U3KQE9 123 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 TEX15Q9BXT5 2789 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 A0A087X0K7 114 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 HIGD1CA8MV81 97 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 CHEK1O14757 476 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 COA6Q5JTJ3 125 aaKnown RBP13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 C1orf194Q5T5A4 169 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 TMEM136Q6ZRR5 245 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 OR4X2Q8NGF9 303 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 VPREB3Q9UKI3 123 aa13.33□□□□□ -0.28
PCDHGC3-205ENST00000617641 ZNF705FA8MVS1 300 aaPredicted RBP13.32□□□□□ -0.28
PCDHGC3-205ENST00000617641 DEFA6Q01524 100 aa13.32□□□□□ -0.28
PCDHGC3-205ENST00000617641 TCF24Q7RTU0 167 aa13.32□□□□□ -0.28
PCDHGC3-205ENST00000617641 NAT8BQ9UHF3 227 aa13.32□□□□□ -0.28
PCDHGC3-205ENST00000617641 ZNF469Q96JG9 3925 aaPredicted RBP13.32□□□□□ -0.28
PCDHGC3-205ENST00000617641 FABP4P15090 132 aa13.31□□□□□ -0.28
PCDHGC3-205ENST00000617641 S100A2P29034 98 aa13.31□□□□□ -0.28
PCDHGC3-205ENST00000617641 RAB4BP61018 213 aa13.31□□□□□ -0.28
PCDHGC3-205ENST00000617641 C8orf49Q96NF6 230 aa13.31□□□□□ -0.28
PCDHGC3-205ENST00000617641 MXRA5Q9NR99 2828 aa13.31□□□□□ -0.28
PCDHGC3-205ENST00000617641 A0A1B0GUS0 222 aa13.31□□□□□ -0.28
PCDHGC3-205ENST00000617641 WDR73Q6P4I2 378 aa13.31□□□□□ -0.28
PCDHGC3-205ENST00000617641 C10orf99Q6UWK7 81 aa13.31□□□□□ -0.28
PCDHGC3-205ENST00000617641 ZNF580Q9UK33 172 aa13.31□□□□□ -0.28
PCDHGC3-205ENST00000617641 A0A0G2JLM5 398 aa13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 SERTM2A0A1B0GWG4 89 aa13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 A8MWL6 223 aa13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 NPIPB6E9PJ23 425 aa13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 NDUFA4O00483 81 aa13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 HOXA3O43365 443 aaPredicted RBP13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 RNF182Q8N6D2 247 aa13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 OR10D4PQ8NGN7 298 aa13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 GRIFINA4D1Z8 144 aa13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 CT83Q5H943 113 aa13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 LCN12Q6JVE5 192 aa13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 GTSF1Q8WW33 167 aa13.3□□□□□ -0.28
PCDHGC3-205ENST00000617641 SMAD7O15105 426 aaKnown RBP13.29□□□□□ -0.28
PCDHGC3-205ENST00000617641 HIST1H2BLQ99880 126 aa13.29□□□□□ -0.28
PCDHGC3-205ENST00000617641 VGLL1Q99990 258 aa13.29□□□□□ -0.28
PCDHGC3-205ENST00000617641 MT-ND6P03923 174 aa13.29□□□□□ -0.28
PCDHGC3-205ENST00000617641 GZMBP10144 247 aa13.29□□□□□ -0.28
PCDHGC3-205ENST00000617641 PSMB8P28062 276 aa13.29□□□□□ -0.28
PCDHGC3-205ENST00000617641 CRIP1P50238 77 aa13.29□□□□□ -0.28
PCDHGC3-205ENST00000617641 OR2D3Q8NGH3 330 aa13.29□□□□□ -0.28
PCDHGC3-205ENST00000617641 Q8TAT8 98 aa13.29□□□□□ -0.28
PCDHGC3-205ENST00000617641 COX19Q49B96 90 aa13.28□□□□□ -0.28
PCDHGC3-205ENST00000617641 C16orf54Q6UWD8 224 aa13.28□□□□□ -0.28
PCDHGC3-205ENST00000617641 IL17RELQ6ZVW7 336 aa13.28□□□□□ -0.28
PCDHGC3-205ENST00000617641 ITPR3Q14573 2671 aa13.28□□□□□ -0.28
PCDHGC3-205ENST00000617641 PRAC2D3DTV9 90 aa13.28□□□□□ -0.28
PCDHGC3-205ENST00000617641 KIAA1644Q3SXP7 199 aa13.28□□□□□ -0.28
PCDHGC3-205ENST00000617641 GDF5OSQ5U4N7 250 aa13.28□□□□□ -0.28
PCDHGC3-205ENST00000617641 OR4B1Q8NGF8 309 aa13.28□□□□□ -0.28
PCDHGC3-205ENST00000617641 GLMPQ8WWB7 406 aa13.28□□□□□ -0.28
PCDHGC3-205ENST00000617641 SLC50A1Q9BRV3 221 aa13.28□□□□□ -0.28
PCDHGC3-205ENST00000617641 PRSS47A8MTI9 375 aa13.27□□□□□ -0.28
PCDHGC3-205ENST00000617641 HLA-DQA1P01909 254 aa13.27□□□□□ -0.28
PCDHGC3-205ENST00000617641 C8orf86Q6ZUL3 223 aa13.27□□□□□ -0.28
PCDHGC3-205ENST00000617641 TMEM256Q8N2U0 113 aa13.27□□□□□ -0.28
PCDHGC3-205ENST00000617641 WIPF2Q8TF74 440 aaPredicted RBP13.27□□□□□ -0.28
PCDHGC3-205ENST00000617641 PGLYRP4Q96LB8 373 aa13.27□□□□□ -0.28
PCDHGC3-205ENST00000617641 DUX5Q96PT3 197 aa13.27□□□□□ -0.28
PCDHGC3-205ENST00000617641 TRAV8-2A0A0B4J237 113 aa13.27□□□□□ -0.29
PCDHGC3-205ENST00000617641 AMBPP02760 352 aa13.27□□□□□ -0.29
PCDHGC3-205ENST00000617641 NPFFR1Q9GZQ6 430 aa13.27□□□□□ -0.29
PCDHGC3-205ENST00000617641 ZNF702PQ9H963 129 aa13.27□□□□□ -0.29
PCDHGC3-205ENST00000617641 HELZ2Q9BYK8 2649 aaKnown RBP13.26□□□□□ -0.29
PCDHGC3-205ENST00000617641 CRISP2P16562 243 aa13.26□□□□□ -0.29
PCDHGC3-205ENST00000617641 ERCC8Q13216 396 aa13.26□□□□□ -0.29
PCDHGC3-205ENST00000617641 RASL11AQ6T310 242 aa13.26□□□□□ -0.29
PCDHGC3-205ENST00000617641 PACRGQ96M98 296 aaPredicted RBP13.26□□□□□ -0.29
PCDHGC3-205ENST00000617641 PRR25Q96S07 402 aa13.26□□□□□ -0.29
PCDHGC3-205ENST00000617641 GFRA4Q9GZZ7 299 aa13.26□□□□□ -0.29
PCDHGC3-205ENST00000617641 PRDM13Q9H4Q3 707 aa13.26□□□□□ -0.29
PCDHGC3-205ENST00000617641 CT45A10P0DMU9 189 aa13.25□□□□□ -0.29
PCDHGC3-205ENST00000617641 CAMPP49913 170 aa13.25□□□□□ -0.29
PCDHGC3-205ENST00000617641 A0A1B0GXF2 115 aa13.25□□□□□ -0.29
PCDHGC3-205ENST00000617641 NUPR1O60356 82 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms