RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 G3V318 75 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 LGALS1P09382 135 aaKnown RBP6.55□□□□□ -1.36
GPC6-202ENST00000617456 SCTP09683 121 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 SEC11BP0C7V7 166 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 EGR2P11161 476 aaPredicted RBP6.55□□□□□ -1.36
GPC6-202ENST00000617456 CNTFRP26992 372 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 SRIP30626 198 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 FCGR2BP31994 310 aaPredicted RBP6.55□□□□□ -1.36
GPC6-202ENST00000617456 TCL1AP56279 114 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 PLGLAQ15195 96 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 RPL39P5Q59GN2 51 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 ZNF343Q6P1L6 599 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 PPP1R27Q86WC6 154 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 Q8N976 141 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 OR13C6PQ8NH95 151 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 OCC1Q8TAD7 63 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 FCAMRQ8WWV6 532 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 ABHD14BQ96IU4 210 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 NMES1Q9C002 83 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 TPSG1Q9NRR2 321 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 PLA2G2EQ9NZK7 142 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 THYN1Q9P016 225 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 PAM16Q9Y3D7 125 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 ALMS1Q8TCU4 4167 aa6.55□□□□□ -1.36
GPC6-202ENST00000617456 IGKV1-6A0A0C4DH72 117 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 SHISA3A0PJX4 238 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 IGKV1-16P04430 117 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 LINC00869P0C866 280 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 AADACP22760 399 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 CNN1P51911 297 aaKnown RBP6.54□□□□□ -1.36
GPC6-202ENST00000617456 SEC11AP67812 179 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 PMCHL1Q16048 86 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 SPATA45Q537H7 98 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 SFXN4Q6P4A7 337 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 SGPP2Q8IWX5 399 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 TEX45Q8NA69 505 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 OR4C12Q96R67 309 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 SPAG8Q99932 426 aaPredicted RBP6.54□□□□□ -1.36
GPC6-202ENST00000617456 FBXL15Q9H469 300 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 OR1A1Q9P1Q5 309 aa6.54□□□□□ -1.36
GPC6-202ENST00000617456 IGHV4OR15-8A0A075B7B6 117 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 A0A087WW49 117 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 LOC102724200A0A096LPH7 203 aaPredicted RBP6.53□□□□□ -1.36
GPC6-202ENST00000617456 ZNF727A8MUV8 499 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 ZNF561-AS1K7EIQ3 104 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 FCN1O00602 326 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 SFT2D2O95562 160 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 CRYGDP07320 174 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 SRP19P09132 144 aaKnown RBP6.53□□□□□ -1.36
GPC6-202ENST00000617456 HINT1P49773 126 aaPredicted RBP6.53□□□□□ -1.36
GPC6-202ENST00000617456 NDPQ00604 133 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 MSMO1Q15800 293 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 RTL8BQ17RB0 113 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 C6orf226Q5I0X4 101 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 UBE2NLQ5JXB2 153 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 SPSB3Q6PJ21 355 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 ZNF66Q6ZN08 573 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 Q6ZRG5 221 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 Q6ZWC4 215 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 Q8N1Y9 231 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 OSR1Q8TAX0 266 aaPredicted RBP6.53□□□□□ -1.36
GPC6-202ENST00000617456 PPP1R1CQ8WVI7 109 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 USMG5Q96IX5 58 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 RAB40CQ96S21 281 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 SPIN2AQ99865 258 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 SPIN2BQ9BPZ2 258 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 ANAPC13Q9BS18 74 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 NIPSNAP3BQ9BS92 247 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 HDHD3Q9BSH5 251 aaPredicted RBP6.53□□□□□ -1.36
GPC6-202ENST00000617456 PARP12Q9H0J9 701 aaKnown RBP6.53□□□□□ -1.36
GPC6-202ENST00000617456 KCNK15Q9H427 330 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 RETNQ9HD89 108 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 C19orf73Q9NVV2 129 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 SIGLEC8Q9NYZ4 499 aa6.53□□□□□ -1.36
GPC6-202ENST00000617456 PLECQ15149 4684 aaKnown RBP6.52□□□□□ -1.37
GPC6-202ENST00000617456 OR2T8A6NH00 312 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 H3BRM9 83 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 M0R1X1 148 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 CA2P00918 260 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 IGLV2-23P01705 113 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 IGHV3-11P01762 117 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 AKAIN1P0CW23 69 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 CT45A10P0DMU9 189 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 P2RY1P47900 373 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 FXYD3Q14802 87 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 ECSCRQ19T08 205 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 BVES-AS1Q5T3Y7 98 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 Q6Q795 121 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 ZNF709Q8N972 641 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 OR2G3Q8NGZ4 309 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 DDB2Q92466 427 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 SLC25A38Q96DW6 304 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 RTBDNQ9BSG5 229 aaPredicted RBP6.52□□□□□ -1.37
GPC6-202ENST00000617456 ST20Q9HBF5 79 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 EHFQ9NZC4 300 aa6.52□□□□□ -1.37
GPC6-202ENST00000617456 TRAV8-6A0A0B4J262 113 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 RBMY1BA6NDE4 496 aaKnown RBP6.51□□□□□ -1.37
GPC6-202ENST00000617456 RBMY1EA6NEQ0 496 aaKnown RBP6.51□□□□□ -1.37
GPC6-202ENST00000617456 C9orf118A6NHY6 69 aa6.51□□□□□ -1.37
GPC6-202ENST00000617456 HMGB3O15347 200 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms