RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 RBMY1BA6NDE4 496 aaKnown RBP11.54□□□□□ -0.56
PCDHGC3-204ENST00000617222 RBMY1EA6NEQ0 496 aaKnown RBP11.54□□□□□ -0.56
PCDHGC3-204ENST00000617222 A8MZ25 164 aa11.54□□□□□ -0.56
PCDHGC3-204ENST00000617222 PRAC2D3DTV9 90 aa11.54□□□□□ -0.56
PCDHGC3-204ENST00000617222 RBMY1DP0C7P1 496 aaKnown RBP11.54□□□□□ -0.56
PCDHGC3-204ENST00000617222 RPL35AP18077 110 aaKnown RBP11.54□□□□□ -0.56
PCDHGC3-204ENST00000617222 UBE2G2P60604 165 aa11.54□□□□□ -0.56
PCDHGC3-204ENST00000617222 STHQ8IWL8 128 aa11.54□□□□□ -0.56
PCDHGC3-204ENST00000617222 ZNF680Q8NEM1 530 aa11.54□□□□□ -0.56
PCDHGC3-204ENST00000617222 SAV1Q9H4B6 383 aaPredicted RBP11.54□□□□□ -0.56
PCDHGC3-204ENST00000617222 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
PCDHGC3-204ENST00000617222 A0A0J9YX75 114 aa11.53□□□□□ -0.56
PCDHGC3-204ENST00000617222 H3BMM0 161 aa11.53□□□□□ -0.56
PCDHGC3-204ENST00000617222 TEX46H3BTG2 121 aa11.53□□□□□ -0.56
PCDHGC3-204ENST00000617222 HBE1P02100 147 aa11.53□□□□□ -0.56
PCDHGC3-204ENST00000617222 ZNF705DP0CH99 300 aaPredicted RBP11.53□□□□□ -0.56
PCDHGC3-204ENST00000617222 ZNF705BP0CI00 300 aaPredicted RBP11.53□□□□□ -0.56
PCDHGC3-204ENST00000617222 BLOC1S1P78537 153 aa11.53□□□□□ -0.56
PCDHGC3-204ENST00000617222 CCL20P78556 96 aa11.53□□□□□ -0.56
PCDHGC3-204ENST00000617222 MRPL53Q96EL3 112 aaKnown RBP11.53□□□□□ -0.56
PCDHGC3-204ENST00000617222 YTHDF2Q9Y5A9 579 aaKnown RBP11.53□□□□□ -0.56
PCDHGC3-204ENST00000617222 LOC102724200A0A096LPH7 203 aaPredicted RBP11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 A0A1W2PRE2 83 aa11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 IFNA7P01567 189 aa11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 IGKV3-20P01619 116 aa11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 FRMD6-AS1P0C7T7 363 aa11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 HLA-DRB4P13762 266 aa11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 CSN1S1P47710 185 aa11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 SUMO1P63165 101 aaKnown RBP11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 HIST1H1AQ02539 215 aaPredicted RBP11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 OR4B1Q8NGF8 309 aa11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 OR8A1Q8NGG7 326 aa11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 HLA-DRB4X5D2U9 266 aa11.52□□□□□ -0.57
PCDHGC3-204ENST00000617222 FAM74A7A6NL05 159 aa11.51□□□□□ -0.57
PCDHGC3-204ENST00000617222 SLC25A5P05141 298 aaKnown RBP11.51□□□□□ -0.57
PCDHGC3-204ENST00000617222 LINC00322Q6ZN03 302 aaPredicted RBP11.51□□□□□ -0.57
PCDHGC3-204ENST00000617222 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
PCDHGC3-204ENST00000617222 CMTM2Q8TAZ6 248 aa11.51□□□□□ -0.57
PCDHGC3-204ENST00000617222 RXFP4Q8TDU9 374 aa11.51□□□□□ -0.57
PCDHGC3-204ENST00000617222 PAGE4O60829 102 aa11.5□□□□□ -0.57
PCDHGC3-204ENST00000617222 DUSP14O95147 198 aaKnown RBP11.5□□□□□ -0.57
PCDHGC3-204ENST00000617222 PPT1P50897 306 aa11.5□□□□□ -0.57
PCDHGC3-204ENST00000617222 CNN1P51911 297 aaKnown RBP11.5□□□□□ -0.57
PCDHGC3-204ENST00000617222 CST9LP1Q5W188 147 aa11.5□□□□□ -0.57
PCDHGC3-204ENST00000617222 OR10J6PQ8NGY7 276 aa11.5□□□□□ -0.57
PCDHGC3-204ENST00000617222 RPH3ALQ9UNE2 315 aa11.5□□□□□ -0.57
PCDHGC3-204ENST00000617222 IGKV2-40A0A087WW87 121 aaPredicted RBP11.49□□□□□ -0.57
PCDHGC3-204ENST00000617222 GGTLC3B5MD39 225 aa11.49□□□□□ -0.57
PCDHGC3-204ENST00000617222 IGKV2D-40P01614 121 aaPredicted RBP11.49□□□□□ -0.57
PCDHGC3-204ENST00000617222 GNG5P63218 68 aa11.49□□□□□ -0.57
PCDHGC3-204ENST00000617222 ERCC8Q13216 396 aa11.49□□□□□ -0.57
PCDHGC3-204ENST00000617222 PCNPQ8WW12 178 aaKnown RBP11.49□□□□□ -0.57
PCDHGC3-204ENST00000617222 GNG13Q9P2W3 67 aa11.49□□□□□ -0.57
PCDHGC3-204ENST00000617222 DIRC3C9JPN6 131 aa11.48□□□□□ -0.57
PCDHGC3-204ENST00000617222 C5orf17Q8NAS9 161 aa11.48□□□□□ -0.57
PCDHGC3-204ENST00000617222 ASCL2Q99929 193 aa11.48□□□□□ -0.57
PCDHGC3-204ENST00000617222 NKX6-2Q9C056 277 aaPredicted RBP11.48□□□□□ -0.57
PCDHGC3-204ENST00000617222 CSTL1Q9H114 145 aa11.48□□□□□ -0.57
PCDHGC3-204ENST00000617222 EPDR1Q9UM22 224 aa11.48□□□□□ -0.57
PCDHGC3-204ENST00000617222 AGRNO00468 2067 aa11.48□□□□□ -0.57
PCDHGC3-204ENST00000617222 ATP5G3P48201 142 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 FXYD7P58549 80 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 IFITM2Q01629 132 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 HAGHQ16775 308 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 GOLT1AQ6ZVE7 132 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 ARL6IP6Q8N6S5 226 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 LYPD6BQ8NI32 183 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 VGLL1Q99990 258 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 MANBALQ9NQG1 85 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 PPP1R14DQ9NXH3 145 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 ARL2-SNX15V9GYD0 113 aa11.47□□□□□ -0.57
PCDHGC3-204ENST00000617222 KIR2DL5BA0A0G2JN68 375 aa11.46□□□□□ -0.57
PCDHGC3-204ENST00000617222 KIR2DL5BA0A0G2JPC4 375 aa11.46□□□□□ -0.57
PCDHGC3-204ENST00000617222 NPIPB6E9PJ23 425 aa11.46□□□□□ -0.57
PCDHGC3-204ENST00000617222 APOC4P55056 127 aa11.46□□□□□ -0.57
PCDHGC3-204ENST00000617222 MORN3Q6PF18 240 aaPredicted RBP11.46□□□□□ -0.57
PCDHGC3-204ENST00000617222 AMTNQ6UX39 209 aa11.46□□□□□ -0.57
PCDHGC3-204ENST00000617222 SBSPONQ8IVN8 264 aa11.46□□□□□ -0.57
PCDHGC3-204ENST00000617222 CCDC28AQ8IWP9 274 aa11.46□□□□□ -0.57
PCDHGC3-204ENST00000617222 KIR2DL5AQ8N109 375 aa11.46□□□□□ -0.57
PCDHGC3-204ENST00000617222 KIR2DL5BQ8NHK3 375 aa11.46□□□□□ -0.57
PCDHGC3-204ENST00000617222 LINC00477Q96M19 166 aa11.46□□□□□ -0.57
PCDHGC3-204ENST00000617222 RBAKDNA6NC62 111 aa11.45□□□□□ -0.58
PCDHGC3-204ENST00000617222 A8MTW9 85 aa11.45□□□□□ -0.58
PCDHGC3-204ENST00000617222 IFNA1P01562 189 aa11.45□□□□□ -0.58
PCDHGC3-204ENST00000617222 TCRAP04437 139 aa11.45□□□□□ -0.58
PCDHGC3-204ENST00000617222 NMBP08949 121 aa11.45□□□□□ -0.58
PCDHGC3-204ENST00000617222 CT45A10P0DMU9 189 aa11.45□□□□□ -0.58
PCDHGC3-204ENST00000617222 NUTF2P61970 127 aaKnown RBP11.45□□□□□ -0.58
PCDHGC3-204ENST00000617222 PMS2P11Q13670 270 aa11.45□□□□□ -0.58
PCDHGC3-204ENST00000617222 C9orf47Q6ZRZ4 202 aa11.45□□□□□ -0.58
PCDHGC3-204ENST00000617222 SLC35B3Q9H1N7 401 aa11.45□□□□□ -0.58
PCDHGC3-204ENST00000617222 C11orf94C9JXX5 98 aa11.44□□□□□ -0.58
PCDHGC3-204ENST00000617222 UBE2CO00762 179 aa11.44□□□□□ -0.58
PCDHGC3-204ENST00000617222 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
PCDHGC3-204ENST00000617222 GIG44P09565 113 aaPredicted RBP11.44□□□□□ -0.58
PCDHGC3-204ENST00000617222 TMEM78Q5T7P6 136 aa11.44□□□□□ -0.58
PCDHGC3-204ENST00000617222 B9D2Q9BPU9 175 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms