RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SHANK2-AS3Q9BTD1 123 aa13.05□□□□□ -0.32
TRAPPC3-209ENST00000616395 SLC25A2Q9BXI2 301 aa13.05□□□□□ -0.32
TRAPPC3-209ENST00000616395 LOC102724200A0A096LPH7 203 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC3-209ENST00000616395 ZNF727A8MUV8 499 aa13.04□□□□□ -0.32
TRAPPC3-209ENST00000616395 M0R036 132 aa13.04□□□□□ -0.32
TRAPPC3-209ENST00000616395 ARL3P36405 182 aa13.04□□□□□ -0.32
TRAPPC3-209ENST00000616395 TVP23CQ96ET8 276 aa13.04□□□□□ -0.32
TRAPPC3-209ENST00000616395 CCDC140Q96MF4 163 aa13.04□□□□□ -0.32
TRAPPC3-209ENST00000616395 PUS1Q9Y606 427 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRAPPC3-209ENST00000616395 A0A1B0GVY2 172 aa13.03□□□□□ -0.32
TRAPPC3-209ENST00000616395 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
TRAPPC3-209ENST00000616395 B4DEV8 164 aa13.03□□□□□ -0.32
TRAPPC3-209ENST00000616395 H3BRN7 92 aa13.03□□□□□ -0.32
TRAPPC3-209ENST00000616395 EIF3GO75821 320 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRAPPC3-209ENST00000616395 RPL7P18124 248 aaKnown RBP13.03□□□□□ -0.32
TRAPPC3-209ENST00000616395 ATF4P18848 351 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC3-209ENST00000616395 EDN2P20800 178 aa13.03□□□□□ -0.32
TRAPPC3-209ENST00000616395 RHEBQ15382 184 aa13.03□□□□□ -0.32
TRAPPC3-209ENST00000616395 METTL26Q96S19 204 aa13.03□□□□□ -0.32
TRAPPC3-209ENST00000616395 SMIM7Q9BQ49 75 aa13.03□□□□□ -0.32
TRAPPC3-209ENST00000616395 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.02□□□□□ -0.33
TRAPPC3-209ENST00000616395 C9JQL5 133 aa13.02□□□□□ -0.33
TRAPPC3-209ENST00000616395 OR10J4P0C629 311 aa13.02□□□□□ -0.33
TRAPPC3-209ENST00000616395 NBEAP1P0C6P0 100 aa13.02□□□□□ -0.33
TRAPPC3-209ENST00000616395 HIST1H1EP10412 219 aaKnown RBP13.02□□□□□ -0.33
TRAPPC3-209ENST00000616395 BMI1P35226 326 aa13.02□□□□□ -0.33
TRAPPC3-209ENST00000616395 CLRN3Q8NCR9 226 aa13.02□□□□□ -0.33
TRAPPC3-209ENST00000616395 FAM167A-AS1Q96KT0 104 aa13.02□□□□□ -0.33
TRAPPC3-209ENST00000616395 SELENOKQ9Y6D0 94 aa13.02□□□□□ -0.33
TRAPPC3-209ENST00000616395 TRAV5A0A0B4J249 113 aa13.01□□□□□ -0.33
TRAPPC3-209ENST00000616395 F8W735 103 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC3-209ENST00000616395 SPRY2O43597 315 aa13.01□□□□□ -0.33
TRAPPC3-209ENST00000616395 GGCTO75223 188 aaKnown RBP13.01□□□□□ -0.33
TRAPPC3-209ENST00000616395 ADCYAP1P18509 176 aa13.01□□□□□ -0.33
TRAPPC3-209ENST00000616395 NPPCP23582 126 aa13.01□□□□□ -0.33
TRAPPC3-209ENST00000616395 TMEM241Q24JQ0 296 aa13.01□□□□□ -0.33
TRAPPC3-209ENST00000616395 ZNF674Q2M3X9 581 aa13.01□□□□□ -0.33
TRAPPC3-209ENST00000616395 GRAMD2BQ96HH9 432 aa13.01□□□□□ -0.33
TRAPPC3-209ENST00000616395 NAT8Q9UHE5 227 aa13.01□□□□□ -0.33
TRAPPC3-209ENST00000616395 TP53TG1Q9Y2A0 90 aa13.01□□□□□ -0.33
TRAPPC3-209ENST00000616395 ZNF98A6NK75 572 aa13□□□□□ -0.33
TRAPPC3-209ENST00000616395 H3BQ15 152 aa13□□□□□ -0.33
TRAPPC3-209ENST00000616395 NDUFA4O00483 81 aa13□□□□□ -0.33
TRAPPC3-209ENST00000616395 FOLR2P14207 255 aa13□□□□□ -0.33
TRAPPC3-209ENST00000616395 MEOX2P50222 304 aa13□□□□□ -0.33
TRAPPC3-209ENST00000616395 FAM106AQ4KMX7 169 aa13□□□□□ -0.33
TRAPPC3-209ENST00000616395 LINC00336Q6ZUF6 198 aa13□□□□□ -0.33
TRAPPC3-209ENST00000616395 LYPD1Q8N2G4 141 aa13□□□□□ -0.33
TRAPPC3-209ENST00000616395 CHRDL1Q9BU40 450 aa13□□□□□ -0.33
TRAPPC3-209ENST00000616395 MUC4Q99102 2169 aa13□□□□□ -0.33
TRAPPC3-209ENST00000616395 FAT2Q9NYQ8 4349 aa13□□□□□ -0.33
TRAPPC3-209ENST00000616395 A0A1W2PS18 150 aa12.99□□□□□ -0.33
TRAPPC3-209ENST00000616395 S100A9P06702 114 aaKnown RBP12.99□□□□□ -0.33
TRAPPC3-209ENST00000616395 ADMP35318 185 aa12.99□□□□□ -0.33
TRAPPC3-209ENST00000616395 ATP5G3P48201 142 aa12.99□□□□□ -0.33
TRAPPC3-209ENST00000616395 DEFB135Q30KP9 77 aa12.99□□□□□ -0.33
TRAPPC3-209ENST00000616395 C1orf194Q5T5A4 169 aa12.99□□□□□ -0.33
TRAPPC3-209ENST00000616395 TOMM20LQ6UXN7 152 aa12.99□□□□□ -0.33
TRAPPC3-209ENST00000616395 OR8I2Q8N0Y5 310 aa12.99□□□□□ -0.33
TRAPPC3-209ENST00000616395 CMTM2Q8TAZ6 248 aa12.99□□□□□ -0.33
TRAPPC3-209ENST00000616395 PARLQ9H300 379 aa12.99□□□□□ -0.33
TRAPPC3-209ENST00000616395 AAMDCQ9H7C9 122 aa12.99□□□□□ -0.33
TRAPPC3-209ENST00000616395 C2orf70A6NJV1 201 aa12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 K7EQM0 130 aa12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 PYYP10082 97 aa12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 GALR1P47211 349 aa12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 CNN1P51911 297 aaKnown RBP12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 SUMO1P63165 101 aaKnown RBP12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 PSG9Q00887 426 aa12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 PDE6HQ13956 83 aa12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 USF2Q15853 346 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 Q6ZWC4 215 aa12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 BLNKQ8WV28 456 aa12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 HIST1H2BAQ96A08 127 aa12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 C11orf52Q96A22 123 aa12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 FXYD5Q96DB9 178 aa12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 YTHDF2Q9Y5A9 579 aaKnown RBP12.98□□□□□ -0.33
TRAPPC3-209ENST00000616395 DNAH2Q9P225 4427 aa12.97□□□□□ -0.33
TRAPPC3-209ENST00000616395 DYNC1H1Q14204 4646 aaKnown RBP12.97□□□□□ -0.33
TRAPPC3-209ENST00000616395 IGHV3-35A0A0C4DH35 117 aa12.97□□□□□ -0.33
TRAPPC3-209ENST00000616395 AKR1C3P42330 323 aa12.97□□□□□ -0.33
TRAPPC3-209ENST00000616395 FAM90A2PQ658T7 463 aa12.97□□□□□ -0.33
TRAPPC3-209ENST00000616395 ZNF503Q96F45 646 aa12.97□□□□□ -0.33
TRAPPC3-209ENST00000616395 RPS10P5Q9NQ39 176 aa12.97□□□□□ -0.33
TRAPPC3-209ENST00000616395 DNAH6Q9C0G6 4158 aa12.97□□□□□ -0.33
TRAPPC3-209ENST00000616395 NDUFB4O95168 129 aa12.96□□□□□ -0.33
TRAPPC3-209ENST00000616395 SLC25A5P05141 298 aaKnown RBP12.96□□□□□ -0.33
TRAPPC3-209ENST00000616395 RANP62826 216 aaKnown RBP12.96□□□□□ -0.33
TRAPPC3-209ENST00000616395 MORN5Q5VZ52 161 aa12.96□□□□□ -0.33
TRAPPC3-209ENST00000616395 TMEM61Q8N0U2 210 aa12.96□□□□□ -0.33
TRAPPC3-209ENST00000616395 C20orf24Q9BUV8 137 aa12.96□□□□□ -0.33
TRAPPC3-209ENST00000616395 OTORQ9NRC9 128 aa12.96□□□□□ -0.33
TRAPPC3-209ENST00000616395 HELTA6NFD8 242 aa12.95□□□□□ -0.34
TRAPPC3-209ENST00000616395 MT-ND4LP03901 98 aa12.95□□□□□ -0.34
TRAPPC3-209ENST00000616395 CSN1S1P47710 185 aa12.95□□□□□ -0.34
TRAPPC3-209ENST00000616395 UBE2G1P62253 170 aa12.95□□□□□ -0.34
TRAPPC3-209ENST00000616395 C5orf17Q8NAS9 161 aa12.95□□□□□ -0.34
TRAPPC3-209ENST00000616395 SMCO4Q9NRQ5 59 aa12.95□□□□□ -0.34
TRAPPC3-209ENST00000616395 CLEC5AQ9NY25 188 aa12.95□□□□□ -0.34
TRAPPC3-209ENST00000616395 UFC1Q9Y3C8 167 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 346.8 ms