RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 TNFRSF1AP19438 455 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 EVI2AP22794 236 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 SRSF9Q13242 221 aaKnown RBP eCLIP8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 FAM201AQ5SY85 155 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 HIGD1BQ9P298 99 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 LINC00312Q9Y6C7 94 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 SPTBN4Q9H254 2564 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 IGKV3D-15A0A087WSY6 115 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 TMEM95Q3KNT9 176 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 MRPL51Q4U2R6 128 aaKnown RBP8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 DLX4Q92988 240 aaPredicted RBP8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 PRTN3P24158 256 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 PLA2G2CQ5R387 149 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 FAM104BQ5XKR9 115 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 C11orf53Q8IXP5 236 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 MAP1LC3AQ9H492 121 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 MRPL36Q9P0J6 103 aaKnown RBP8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 COL6A6A6NMZ7 2263 aa8.27□□□□□ -1.09
TNFAIP3-208ENST00000615468 LOXL3P58215 753 aa8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 GAGE2BQ13066 116 aa8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 GAGE2EQ4V326 116 aa8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 SCGB1D4Q6XE38 83 aa8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 TM2D2Q9BX73 214 aa8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 GAGE2DQ9UEU5 116 aa8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 IQCF6A8MYZ5 107 aa8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 C16orf97H3BN30 126 aa8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 ENSAO43768 121 aaKnown RBP8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 ZNF883P0CG24 379 aa8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 ZNF562Q6V9R5 426 aa8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 PRR7Q8TB68 274 aa8.26□□□□□ -1.09
TNFAIP3-208ENST00000615468 SNCGO76070 127 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 HIGD1AQ9Y241 93 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 GAGE12JA6NER3 117 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 E7EUB6 86 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 GAGE7O76087 117 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 GAGE12FP0CL80 117 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 GAGE12GP0CL81 117 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 GAGE12IP0CL82 117 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 MYCNOSP40205 109 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 ATP5IP56385 69 aaPredicted RBP8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 GAGE4Q13068 117 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 NFE4Q86UQ8 179 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 MAPKAPK5-AS1Q8N8E1 139 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 FDCSPQ8NFU4 85 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 RBP4P02753 201 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 PPDPFLQ8WWR9 84 aa8.25□□□□□ -1.09
TNFAIP3-208ENST00000615468 IGKV1D-17A0A075B6S4 117 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 RPL32P62910 135 aaKnown RBP8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 ODF1Q14990 250 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 FAM90A1Q86YD7 464 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 MRPL35Q9NZE8 188 aaKnown RBP8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 ATRXP46100 2492 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 TRAV8-2A0A0B4J237 113 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 WT1P19544 449 aaPredicted RBP8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 WT1-ASQ06250 92 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 Q6AWC8 147 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 MOGAT3Q86VF5 341 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 MYOZ3Q8TDC0 251 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 TMEM158Q8WZ71 300 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 KIR2DL4Q99706 377 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 RAB9BQ9NP90 201 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 OTORQ9NRC9 128 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 CHD8Q9HCK8 2581 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 NCOR2Q9Y618 2525 aa8.24□□□□□ -1.09
TNFAIP3-208ENST00000615468 M0R3E3 92 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 KLK15Q9H2R5 256 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 HIF1ANQ9NWT6 349 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 PRO0461Q9UI25 63 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 PKDREJQ9NTG1 2253 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 TRGV5A0A0B4J1U4 118 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 ANKRD11Q6UB99 2663 aaPredicted RBP8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 A8MWV9 139 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 ZFP2Q6ZN57 461 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 C3orf56Q8N813 242 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 C8orf49Q96NF6 230 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 MRPL20Q9BYC9 149 aaKnown RBP8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 HHLA3Q9XRX5 114 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 ZNF292O60281 2723 aa8.23□□□□□ -1.09
TNFAIP3-208ENST00000615468 IGKV1D-37A0A075B6S9 117 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 CCDC179H3BU77 68 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 SPRY3O43610 288 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 ORM1P02763 201 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 RPUSD1Q9UJJ7 312 aaKnown RBP8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 AKAP13Q12802 2813 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 FHL3Q13643 280 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 PSMG4Q5JS54 123 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 C17orf77Q96MU5 243 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 NDUFA4L2Q9NRX3 87 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 PTPRBP23467 1997 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 WI2-2373I1.2A0A1W2PRP0 233 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 ZNF688P0C7X2 276 aa8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 TLN1Q9Y490 2541 aaKnown RBP8.22□□□□□ -1.09
TNFAIP3-208ENST00000615468 FOXC1Q12948 553 aa8.21□□□□□ -1.09
TNFAIP3-208ENST00000615468 C1orf122Q6ZSJ8 110 aa8.21□□□□□ -1.09
TNFAIP3-208ENST00000615468 CITED1Q99966 193 aa8.21□□□□□ -1.09
TNFAIP3-208ENST00000615468 IGHV3-72A0A0B4J1Y9 119 aa8.21□□□□□ -1.1
TNFAIP3-208ENST00000615468 GP9P14770 177 aa8.21□□□□□ -1.1
TNFAIP3-208ENST00000615468 CFAP126Q5VTH2 177 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms