RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 CITED4Q96RK1 184 aa9.6□□□□□ -0.87
SRGAP2C-204ENST00000613462 SAV1Q9H4B6 383 aaPredicted RBP9.6□□□□□ -0.87
SRGAP2C-204ENST00000613462 AAMDCQ9H7C9 122 aa9.6□□□□□ -0.87
SRGAP2C-204ENST00000613462 SLC17A3O00476 420 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 OR10J4P0C629 311 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 HLA-DRB4P13762 266 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 GCHFRP30047 84 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 PSG3Q16557 428 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 ACTL10Q5JWF8 245 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 EBLN2Q6P2I7 272 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 LYPD1Q8N2G4 141 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 ZNF738Q8NE65 137 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 BLNKQ8WV28 456 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 MRPL53Q96EL3 112 aaKnown RBP9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 TMEM167BQ9NRX6 74 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 PRELID1Q9Y255 219 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 HLA-DRB4X5D2U9 266 aa9.59□□□□□ -0.87
SRGAP2C-204ENST00000613462 TRAV1-1A0A0B4J248 108 aa9.58□□□□□ -0.88
SRGAP2C-204ENST00000613462 UBE2CO00762 179 aa9.58□□□□□ -0.88
SRGAP2C-204ENST00000613462 NHLRC4P0CG21 123 aaPredicted RBP9.58□□□□□ -0.88
SRGAP2C-204ENST00000613462 ZNF124Q15973 351 aa9.58□□□□□ -0.88
SRGAP2C-204ENST00000613462 MORN3Q6PF18 240 aaPredicted RBP9.58□□□□□ -0.88
SRGAP2C-204ENST00000613462 TRPT1Q86TN4 253 aaKnown RBP9.58□□□□□ -0.88
SRGAP2C-204ENST00000613462 RNF182Q8N6D2 247 aa9.58□□□□□ -0.88
SRGAP2C-204ENST00000613462 ZNF503Q96F45 646 aa9.58□□□□□ -0.88
SRGAP2C-204ENST00000613462 C20orf173Q96LM9 149 aa9.58□□□□□ -0.88
SRGAP2C-204ENST00000613462 CLUHP3Q96NS8 147 aa9.58□□□□□ -0.88
SRGAP2C-204ENST00000613462 GNG13Q9P2W3 67 aa9.58□□□□□ -0.88
SRGAP2C-204ENST00000613462 DNAH9Q9NYC9 4486 aa9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 KNCNA6PVL3 124 aa9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 H3BMM0 161 aa9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 H3BTX0 84 aa9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 DUSP14O95147 198 aaKnown RBP9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 NDUFB4O95168 129 aa9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 SNRPCP09234 159 aaKnown RBP9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 RPL35AP18077 110 aaKnown RBP9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 NUTF2P61970 127 aaKnown RBP9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 HAGHQ16775 308 aa9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 RPUSD4Q96CM3 377 aaKnown RBP9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 MANBALQ9NQG1 85 aa9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 TENM3Q9P273 2699 aa9.57□□□□□ -0.88
SRGAP2C-204ENST00000613462 A0A0J9YX75 114 aa9.56□□□□□ -0.88
SRGAP2C-204ENST00000613462 TAGLN2P37802 199 aaKnown RBP9.56□□□□□ -0.88
SRGAP2C-204ENST00000613462 IGFL4Q6B9Z1 124 aa9.56□□□□□ -0.88
SRGAP2C-204ENST00000613462 SUN5Q8TC36 379 aa9.56□□□□□ -0.88
SRGAP2C-204ENST00000613462 CSTL1Q9H114 145 aa9.56□□□□□ -0.88
SRGAP2C-204ENST00000613462 ZMAT4Q9H898 229 aa9.56□□□□□ -0.88
SRGAP2C-204ENST00000613462 UBE2G2P60604 165 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 GDF5OSQ5U4N7 250 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 Q6ZWC4 215 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 COMMD7Q86VX2 200 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 SBSPONQ8IVN8 264 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 OR8A1Q8NGG7 326 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 OR10J6PQ8NGY7 276 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 SPATA25Q9BR10 227 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 TM2D3Q9BRN9 247 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 C1QTNF4Q9BXJ3 329 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 EIF5A2Q9GZV4 153 aaKnown RBP9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 TMPRSS5Q9H3S3 457 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 OTORQ9NRC9 128 aa9.55□□□□□ -0.88
SRGAP2C-204ENST00000613462 A8MTW9 85 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 HLA-DMBP28068 263 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 CSN1S1P47710 185 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 RANP62826 216 aaKnown RBP9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 CCL20P78556 96 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 ICAM4Q14773 271 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 NDUFA5Q16718 116 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 TOR2AQ5JU69 321 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 CST9LP1Q5W188 147 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 ARL6IP6Q8N6S5 226 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 OR4B1Q8NGF8 309 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 LYPD6BQ8NI32 183 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 RXFP4Q8TDU9 374 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 Q9H3A6 140 aa9.54□□□□□ -0.88
SRGAP2C-204ENST00000613462 RBFOX3A6NFN3 312 aa9.53□□□□□ -0.88
SRGAP2C-204ENST00000613462 F6UB75 175 aa9.53□□□□□ -0.88
SRGAP2C-204ENST00000613462 PAGE4O60829 102 aa9.53□□□□□ -0.88
SRGAP2C-204ENST00000613462 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
SRGAP2C-204ENST00000613462 BCL2P10415 239 aa9.53□□□□□ -0.88
SRGAP2C-204ENST00000613462 CNN1P51911 297 aaKnown RBP9.53□□□□□ -0.88
SRGAP2C-204ENST00000613462 HIST1H1AQ02539 215 aaPredicted RBP9.53□□□□□ -0.88
SRGAP2C-204ENST00000613462 EXOC3-AS1Q8N2X6 119 aa9.53□□□□□ -0.88
SRGAP2C-204ENST00000613462 NKX6-2Q9C056 277 aaPredicted RBP9.53□□□□□ -0.88
SRGAP2C-204ENST00000613462 TP53TG1Q9Y2A0 90 aa9.53□□□□□ -0.88
SRGAP2C-204ENST00000613462 ARL2-SNX15V9GYD0 113 aa9.53□□□□□ -0.88
SRGAP2C-204ENST00000613462 A0A1W2PRE2 83 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 RAB19A4D1S5 217 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 LINC00862A6NCI5 91 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 ZNF705FA8MVS1 300 aaPredicted RBP9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 AMBPP02760 352 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 DEFB1P60022 68 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 PEA15Q15121 130 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 CMTM2Q8TAZ6 248 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 FAM210AQ96ND0 272 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 ODF3Q96PU9 254 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 ASCL2Q99929 193 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 TREM1Q9NP99 234 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 MED9Q9NWA0 146 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 VAX2Q9UIW0 290 aa9.52□□□□□ -0.89
SRGAP2C-204ENST00000613462 LOC102723971A0A1B0GUV8 181 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms