RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 ZGRF1Q86YA3 2104 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 CD28P10747 220 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 FXYD5Q96DB9 178 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 SPRY4Q9C004 299 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 DKK4Q9UBT3 224 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 MALRD1Q5VYJ5 2156 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 IGHV2-70DA0A0C4DH43 119 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 H3BRN7 92 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 CD300EQ496F6 205 aaPredicted RBP11.01□□□□□ -0.65
GGA3-220ENST00000613421 C8orf31Q8N9H6 132 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 DENND4AQ7Z401 1863 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 TRAV12-3A0A0B4J271 114 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 TMEM158Q8WZ71 300 aa11.01□□□□□ -0.65
GGA3-220ENST00000613421 IGLC1P0CG04 106 aa11□□□□□ -0.65
GGA3-220ENST00000613421 DAZ1Q9NQZ3 744 aaKnown RBP11□□□□□ -0.65
GGA3-220ENST00000613421 ALPK3Q96L96 1907 aa11□□□□□ -0.65
GGA3-220ENST00000613421 TMEM213A2RRL7 107 aa11□□□□□ -0.65
GGA3-220ENST00000613421 NDUFS8O00217 210 aa11□□□□□ -0.65
GGA3-220ENST00000613421 RNF182Q8N6D2 247 aa11□□□□□ -0.65
GGA3-220ENST00000613421 C14orf178Q8N769 122 aaPredicted RBP11□□□□□ -0.65
GGA3-220ENST00000613421 C20orf144Q9BQM9 153 aa11□□□□□ -0.65
GGA3-220ENST00000613421 CTSZQ9UBR2 303 aa11□□□□□ -0.65
GGA3-220ENST00000613421 OVOL3O00110 214 aa11□□□□□ -0.65
GGA3-220ENST00000613421 EMP1P54849 157 aa11□□□□□ -0.65
GGA3-220ENST00000613421 SLAQ13239 276 aa11□□□□□ -0.65
GGA3-220ENST00000613421 MPV17L2Q567V2 206 aa11□□□□□ -0.65
GGA3-220ENST00000613421 C11orf44Q8N8P7 122 aa11□□□□□ -0.65
GGA3-220ENST00000613421 LSM4Q9Y4Z0 139 aaKnown RBP11□□□□□ -0.65
GGA3-220ENST00000613421 A0A1W2PNU3 283 aaPredicted RBP11□□□□□ -0.65
GGA3-220ENST00000613421 OR2K2Q8NGT1 345 aa11□□□□□ -0.65
GGA3-220ENST00000613421 MCRIP2Q9BUT9 160 aaKnown RBP11□□□□□ -0.65
GGA3-220ENST00000613421 K7EM74 188 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 DNAL4O96015 105 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 SLC25A16P16260 332 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 OR5A1Q8NGJ0 315 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 OR13C6PQ8NH95 151 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 NCOA6Q14686 2063 aaPredicted RBP10.99□□□□□ -0.65
GGA3-220ENST00000613421 A0A087X0K7 114 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 TMEM8BA6NDV4 472 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 SHISA9B4DS77 424 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 G3V318 75 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 EREGO14944 169 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 SSBP2P81877 361 aaPredicted RBP10.99□□□□□ -0.65
GGA3-220ENST00000613421 PIP4P2Q8N4L2 257 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 TOMM7Q9P0U1 55 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 PRSS46E5RG02 174 aa10.99□□□□□ -0.65
GGA3-220ENST00000613421 HOXA3O43365 443 aaPredicted RBP10.99□□□□□ -0.65
GGA3-220ENST00000613421 ABCA1O95477 2261 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 NBL1P41271 181 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 PLNP26678 52 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 Q6ZWC4 215 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 IGHV1-69DA0A0B4J2H0 117 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 K7EN84 100 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 IGHV1-69P01742 117 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 MSMBP08118 114 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 IGF2-ASQ6U949 168 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 SFTA2Q6UW10 78 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 IL17RELQ6ZVW7 336 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 IGKV3D-20A0A0C4DH25 116 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 TNFRSF6BO95407 300 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 FAM104BQ5XKR9 115 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 LINC01356Q8N9X3 169 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 ZNF479Q96JC4 524 aa10.98□□□□□ -0.65
GGA3-220ENST00000613421 IGLC7A0M8Q6 106 aa10.97□□□□□ -0.65
GGA3-220ENST00000613421 TDGF1P3P51864 188 aa10.97□□□□□ -0.65
GGA3-220ENST00000613421 PRSS33Q8NF86 280 aa10.97□□□□□ -0.65
GGA3-220ENST00000613421 RCHY1Q96PM5 261 aa10.97□□□□□ -0.65
GGA3-220ENST00000613421 PCDH15Q96QU1 1955 aa10.97□□□□□ -0.65
GGA3-220ENST00000613421 BCL6BQ8N143 479 aaPredicted RBP10.97□□□□□ -0.65
GGA3-220ENST00000613421 FREM1Q5H8C1 2179 aa10.97□□□□□ -0.65
GGA3-220ENST00000613421 VCYO14598 125 aa10.97□□□□□ -0.65
GGA3-220ENST00000613421 SAMD5Q5TGI4 173 aa10.97□□□□□ -0.65
GGA3-220ENST00000613421 MED13Q9UHV7 2174 aa10.97□□□□□ -0.65
GGA3-220ENST00000613421 CSTL1Q9H114 145 aa10.97□□□□□ -0.65
GGA3-220ENST00000613421 TRAV2A0A0B4J234 112 aa10.96□□□□□ -0.65
GGA3-220ENST00000613421 ZFHX2Q9C0A1 2572 aaPredicted RBP10.96□□□□□ -0.65
GGA3-220ENST00000613421 C22orf46C9J442 243 aa10.96□□□□□ -0.65
GGA3-220ENST00000613421 ZNF876PQ49A33 203 aa10.96□□□□□ -0.65
GGA3-220ENST00000613421 ZC2HC1BQ5TFG8 222 aa10.96□□□□□ -0.65
GGA3-220ENST00000613421 PRR25Q96S07 402 aa10.96□□□□□ -0.65
GGA3-220ENST00000613421 MED13LQ71F56 2210 aa10.96□□□□□ -0.66
GGA3-220ENST00000613421 RNASE1P07998 156 aaKnown RBP10.95□□□□□ -0.66
GGA3-220ENST00000613421 DEFB104AQ8WTQ1 72 aa10.95□□□□□ -0.66
GGA3-220ENST00000613421 KLF2Q9Y5W3 355 aaPredicted RBP10.95□□□□□ -0.66
GGA3-220ENST00000613421 A0A1B0GV72 72 aa10.95□□□□□ -0.66
GGA3-220ENST00000613421 TECTAO75443 2155 aa10.95□□□□□ -0.66
GGA3-220ENST00000613421 IGHV3-64A0A075B6Q5 118 aa10.95□□□□□ -0.66
GGA3-220ENST00000613421 IGHV3-73A0A0B4J1V6 119 aa10.95□□□□□ -0.66
GGA3-220ENST00000613421 ASPHD1Q5U4P2 390 aa10.95□□□□□ -0.66
GGA3-220ENST00000613421 ZC2HC1AQ96GY0 325 aa10.95□□□□□ -0.66
GGA3-220ENST00000613421 NAA38Q9BRA0 125 aaKnown RBP10.95□□□□□ -0.66
GGA3-220ENST00000613421 ADAMTS9Q9P2N4 1935 aa10.94□□□□□ -0.66
GGA3-220ENST00000613421 CREBBPQ92793 2442 aa10.94□□□□□ -0.66
GGA3-220ENST00000613421 GATA3P23771 443 aa10.94□□□□□ -0.66
GGA3-220ENST00000613421 MUC22E2RYF6 1773 aaPredicted RBP10.94□□□□□ -0.66
GGA3-220ENST00000613421 TRGV4A0A0C4DH28 118 aa10.94□□□□□ -0.66
GGA3-220ENST00000613421 IGLV2-14P01704 120 aa10.94□□□□□ -0.66
GGA3-220ENST00000613421 ZNF415Q09FC8 603 aa10.94□□□□□ -0.66
GGA3-220ENST00000613421 TTC32Q5I0X7 151 aa10.94□□□□□ -0.66
GGA3-220ENST00000613421 C8orf86Q6ZUL3 223 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms