RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 TNFSF13O75888 250 aa8.92□□□□□ -0.98
CNTNAP3B-211ENST00000612828 DEFB131AP59861 70 aa8.92□□□□□ -0.98
CNTNAP3B-211ENST00000612828 ZCCHC24Q8N2G6 241 aaKnown RBP8.92□□□□□ -0.98
CNTNAP3B-211ENST00000612828 TRAV13-2A0A0B4J235 113 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 SMKR1H3BMG3 65 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 M0R2N4 97 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 H0YL77 283 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 HIGD2BQ4VC39 106 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 DUX4L9Q6RFH8 374 aaPredicted RBP8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 C9orf40Q8IXQ3 194 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 B9D2Q9BPU9 175 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 MCRIP2Q9BUT9 160 aaKnown RBP8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 A0A1B0GTI1 187 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 PRCDQ00LT1 54 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 H1FOOQ8IZA3 346 aaPredicted RBP8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 CELA2AP08217 269 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 BCL6BQ8N143 479 aaPredicted RBP8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 CSPG4Q6UVK1 2322 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 ATRAIDQ6UW56 229 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 BMPERQ8N8U9 685 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 ABCA3Q99758 1704 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 SRSF2Q01130 221 aaKnown RBP8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 SPINK13Q1W4C9 94 aa8.91□□□□□ -0.98
CNTNAP3B-211ENST00000612828 PCNX1Q96RV3 2341 aa8.9□□□□□ -0.98
CNTNAP3B-211ENST00000612828 TRAV26-2A0A0B4J265 109 aa8.9□□□□□ -0.98
CNTNAP3B-211ENST00000612828 SPINK1P00995 79 aa8.9□□□□□ -0.98
CNTNAP3B-211ENST00000612828 C8orf49Q96NF6 230 aa8.9□□□□□ -0.98
CNTNAP3B-211ENST00000612828 SPTAN1Q13813 2472 aaKnown RBP8.9□□□□□ -0.98
CNTNAP3B-211ENST00000612828 GCHFRP30047 84 aa8.9□□□□□ -0.98
CNTNAP3B-211ENST00000612828 UBE2D2P62837 147 aa8.9□□□□□ -0.98
CNTNAP3B-211ENST00000612828 SLC25A45Q8N413 288 aa8.9□□□□□ -0.98
CNTNAP3B-211ENST00000612828 C2orf16Q68DN1 1984 aa8.9□□□□□ -0.99
CNTNAP3B-211ENST00000612828 IGHMP01871 453 aa8.9□□□□□ -0.99
CNTNAP3B-211ENST00000612828 ADAMTSL5Q6ZMM2 481 aa8.9□□□□□ -0.99
CNTNAP3B-211ENST00000612828 TRBV5-7A0A0A0MS05 114 aa8.9□□□□□ -0.99
CNTNAP3B-211ENST00000612828 FOXF2Q12947 444 aa8.9□□□□□ -0.99
CNTNAP3B-211ENST00000612828 ODF1Q14990 250 aa8.9□□□□□ -0.99
CNTNAP3B-211ENST00000612828 AMTNQ6UX39 209 aa8.9□□□□□ -0.99
CNTNAP3B-211ENST00000612828 LTBP4Q8N2S1 1624 aa8.89□□□□□ -0.99
CNTNAP3B-211ENST00000612828 ARFGEF1Q9Y6D6 1849 aa8.89□□□□□ -0.99
CNTNAP3B-211ENST00000612828 ARTNQ5T4W7 220 aa8.89□□□□□ -0.99
CNTNAP3B-211ENST00000612828 LINC01590Q5TEZ4 76 aa8.89□□□□□ -0.99
CNTNAP3B-211ENST00000612828 CAMK2N2Q96S95 79 aa8.89□□□□□ -0.99
CNTNAP3B-211ENST00000612828 SMIM9A6NGZ8 99 aa8.89□□□□□ -0.99
CNTNAP3B-211ENST00000612828 HIST1H2BLQ99880 126 aa8.89□□□□□ -0.99
CNTNAP3B-211ENST00000612828 A0A087WZ39 114 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 FGF12P61328 243 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 MRPL32Q9BYC8 188 aaKnown RBP8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 SH2D1AO60880 128 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 ANKRD36A6QL64 1941 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 DOCK1Q14185 1865 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 H3BUX3 64 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 DEFB125Q8N687 156 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 IGKV1D-13A0A0B4J2D9 117 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 IGKV1-13P0DP09 117 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 HOXD4P09016 255 aaPredicted RBP8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 LINC00479Q96M42 142 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 IGKV1-27A0A075B6S5 117 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 IGHV7-4-1A0A0J9YVY3 117 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 PSMB8P28062 276 aa8.88□□□□□ -0.99
CNTNAP3B-211ENST00000612828 C9orf85Q96MD7 179 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 LAMB2P55268 1798 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 BTCP35070 178 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 COL24A1Q17RW2 1714 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 Q8N9W7 124 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 PILRBQ9UKJ0 227 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 PTPRFP10586 1907 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 LOC101059948A0A1B0GTJ6 334 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 KLF14Q8TD94 323 aaPredicted RBP8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 TRPM7Q96QT4 1865 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 IGHV1OR15-9A0A0B4J2B8 117 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 FGF6P10767 208 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 VMO1Q7Z5L0 202 aa8.87□□□□□ -0.99
CNTNAP3B-211ENST00000612828 IGKV1-6A0A0C4DH72 117 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 LOC105371267A0A1B0GV96 52 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 NDUFS7O75251 213 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 TFF3Q07654 80 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 IFNL4K9M1U5 179 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 ZNF721Q8TF20 911 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 SCN10AQ9Y5Y9 1956 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 PLXND1Q9Y4D7 1925 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 MIR17HGQ75NE6 70 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 ZC2HC1AQ96GY0 325 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 SHANK3Q9BYB0 1731 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 USF3Q68DE3 2245 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 IGLV1-36A0A0B4J1U3 117 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 AJUBAQ96IF1 538 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 EXOC3-AS1Q8N2X6 119 aa8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 NOP10Q9NPE3 64 aaKnown RBP8.86□□□□□ -0.99
CNTNAP3B-211ENST00000612828 PYYP10082 97 aa8.85□□□□□ -0.99
CNTNAP3B-211ENST00000612828 PRSS46E5RG02 174 aa8.85□□□□□ -0.99
CNTNAP3B-211ENST00000612828 SRP19P09132 144 aaKnown RBP8.85□□□□□ -0.99
CNTNAP3B-211ENST00000612828 TAX1BP3O14907 124 aa8.85□□□□□ -0.99
CNTNAP3B-211ENST00000612828 HLA-DRB4P13762 266 aa8.85□□□□□ -0.99
CNTNAP3B-211ENST00000612828 TMEM242Q9NWH2 141 aa8.85□□□□□ -0.99
CNTNAP3B-211ENST00000612828 HLA-DRB4X5D2U9 266 aa8.85□□□□□ -0.99
CNTNAP3B-211ENST00000612828 TRAV3A0A0B4J244 114 aa8.85□□□□□ -0.99
CNTNAP3B-211ENST00000612828 IGHV2-70DA0A0C4DH43 119 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms