RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	RHOB	P62745	196 aa		11.97	□□□□□ -0.49
CCND3-222	ENST00000612455	C12orf74	Q32Q52	190 aa		11.97	□□□□□ -0.49
CCND3-222	ENST00000612455		Q5BKY6	102 aa		11.97	□□□□□ -0.49
CCND3-222	ENST00000612455	SCGB1C1	Q8TD33	95 aa		11.97	□□□□□ -0.49
CCND3-222	ENST00000612455	INS	P01308	110 aa		11.96	□□□□□ -0.49
CCND3-222	ENST00000612455	HBE1	P02100	147 aa		11.96	□□□□□ -0.49
CCND3-222	ENST00000612455	PRB4	P10163	310 aa	Predicted RBP	11.96	□□□□□ -0.49
CCND3-222	ENST00000612455		Q6ZTC4	211 aa		11.96	□□□□□ -0.49
CCND3-222	ENST00000612455	LINC00476	Q8WZB0	136 aa		11.96	□□□□□ -0.49
CCND3-222	ENST00000612455	AQP10	Q96PS8	301 aa		11.96	□□□□□ -0.49
CCND3-222	ENST00000612455	OR51M1	Q9H341	326 aa		11.96	□□□□□ -0.49
CCND3-222	ENST00000612455	PRELID1	Q9Y255	219 aa		11.96	□□□□□ -0.49
CCND3-222	ENST00000612455	TRAV12-2	A0A075B6T6	113 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	NBEAP1	P0C6P0	100 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	TCTA	P57738	103 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	RRN3P1	Q2M238	152 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	FFAR4	Q5NUL3	377 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	BAP18	Q8IXM2	172 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	OR10J6P	Q8NGY7	276 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	C2CD4C	Q8TF44	421 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	FXYD5	Q96DB9	178 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	ZNF503	Q96F45	646 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	PPP1R14D	Q9NXH3	145 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	DKK2	Q9UBU2	259 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	TIMM9	Q9Y5J7	89 aa		11.95	□□□□□ -0.5
CCND3-222	ENST00000612455	TRAV10	A0A0B4J240	114 aa		11.94	□□□□□ -0.5
CCND3-222	ENST00000612455	NPIPB6	E9PJ23	425 aa		11.94	□□□□□ -0.5
CCND3-222	ENST00000612455	SPART-AS1	P0CW21	52 aa		11.94	□□□□□ -0.5
CCND3-222	ENST00000612455	CDKN1B	P46527	198 aa		11.94	□□□□□ -0.5
CCND3-222	ENST00000612455	TMEM256	Q8N2U0	113 aa		11.94	□□□□□ -0.5
CCND3-222	ENST00000612455	ODF3	Q96PU9	254 aa		11.94	□□□□□ -0.5
CCND3-222	ENST00000612455	PAXX	Q9BUH6	204 aa		11.94	□□□□□ -0.5
CCND3-222	ENST00000612455	LOC102723971	A0A1B0GUV8	181 aa		11.93	□□□□□ -0.5
CCND3-222	ENST00000612455		M0R3E3	92 aa		11.93	□□□□□ -0.5
CCND3-222	ENST00000612455	CT45A10	P0DMU9	189 aa		11.93	□□□□□ -0.5
CCND3-222	ENST00000612455	TSPO	P30536	169 aa		11.93	□□□□□ -0.5
CCND3-222	ENST00000612455	RPP25L	Q8N5L8	163 aa	Known RBP	11.93	□□□□□ -0.5
CCND3-222	ENST00000612455	BLNK	Q8WV28	456 aa		11.93	□□□□□ -0.5
CCND3-222	ENST00000612455	RNF141	Q8WVD5	230 aa		11.93	□□□□□ -0.5
CCND3-222	ENST00000612455	C20orf144	Q9BQM9	153 aa		11.93	□□□□□ -0.5
CCND3-222	ENST00000612455	TMEM208	Q9BTX3	173 aa		11.93	□□□□□ -0.5
CCND3-222	ENST00000612455	TEX48	A0A1B0GUV7	120 aa		11.92	□□□□□ -0.5
CCND3-222	ENST00000612455	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.92	□□□□□ -0.5
CCND3-222	ENST00000612455	PRM2	P04554	102 aa		11.92	□□□□□ -0.5
CCND3-222	ENST00000612455	EMP1	P54849	157 aa		11.92	□□□□□ -0.5
CCND3-222	ENST00000612455	KIR3DS1	Q14943	382 aa		11.92	□□□□□ -0.5
CCND3-222	ENST00000612455	FAM222A	Q5U5X8	452 aa		11.92	□□□□□ -0.5
CCND3-222	ENST00000612455	EXOC3-AS1	Q8N2X6	119 aa		11.92	□□□□□ -0.5
CCND3-222	ENST00000612455	APLN	Q9ULZ1	77 aa		11.92	□□□□□ -0.5
CCND3-222	ENST00000612455	AZU1	P20160	251 aa		11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	M6PR	P20645	277 aa		11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	TAS2R60	P59551	318 aa		11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	ICAM4	Q14773	271 aa		11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	LGALS9C	Q6DKI2	356 aa		11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	ZNF767P	Q75MW2	155 aa		11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	LYPD1	Q8N2G4	141 aa		11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	FAM19A4	Q96LR4	140 aa		11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	LINC00477	Q96M19	166 aa		11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	LINC01587	Q99440	93 aa		11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.91	□□□□□ -0.5
CCND3-222	ENST00000612455	PLAC8L1	A1L4L8	177 aa		11.9	□□□□□ -0.5
CCND3-222	ENST00000612455	RNF222	A6NCQ9	220 aa		11.9	□□□□□ -0.5
CCND3-222	ENST00000612455		G3V3Q6	166 aa		11.9	□□□□□ -0.5
CCND3-222	ENST00000612455	OR10J4	P0C629	311 aa		11.9	□□□□□ -0.5
CCND3-222	ENST00000612455	ZNF266	Q14584	549 aa		11.9	□□□□□ -0.5
CCND3-222	ENST00000612455	C9orf47	Q6ZRZ4	202 aa		11.9	□□□□□ -0.5
CCND3-222	ENST00000612455	OR2G3	Q8NGZ4	309 aa		11.9	□□□□□ -0.5
CCND3-222	ENST00000612455	NIPSNAP3B	Q9BS92	247 aa		11.9	□□□□□ -0.5
CCND3-222	ENST00000612455	AGPAT4-IT1	Q9H0P7	198 aa		11.9	□□□□□ -0.5
CCND3-222	ENST00000612455	AAMDC	Q9H7C9	122 aa		11.9	□□□□□ -0.5
CCND3-222	ENST00000612455	TNFSF18	Q9UNG2	199 aa		11.9	□□□□□ -0.5
CCND3-222	ENST00000612455	DEFB131B	A0A096LNP1	70 aa		11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	IGLL5	B9A064	214 aa		11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	OR7C2	O60412	319 aa		11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	LY6G6C	O95867	125 aa		11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	TAS2R45	P59539	299 aa		11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	ERCC8	Q13216	396 aa		11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	KHDC3L	Q587J8	217 aa		11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	GFI1B	Q5VTD9	330 aa		11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	OR2T35	Q8NGX2	323 aa		11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	PHYHIPL	Q96FC7	376 aa		11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	PSMG3	Q9BT73	122 aa	Predicted RBP	11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	PLA2G2E	Q9NZK7	142 aa		11.89	□□□□□ -0.51
CCND3-222	ENST00000612455	VPS13D	Q5THJ4	4388 aa		11.88	□□□□□ -0.51
CCND3-222	ENST00000612455		H7BYZ3	331 aa		11.88	□□□□□ -0.51
CCND3-222	ENST00000612455	LEP	P41159	167 aa		11.88	□□□□□ -0.51
CCND3-222	ENST00000612455	RAB2A	P61019	212 aa		11.88	□□□□□ -0.51
CCND3-222	ENST00000612455	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.88	□□□□□ -0.51
CCND3-222	ENST00000612455	IGHV4-4	A0A075B6R2	117 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	LYRM9	A8MSI8	78 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	NMB	P08949	121 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	CRISP2	P16562	243 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	ATP6V0C	P27449	155 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	RAN	P62826	216 aa	Known RBP	11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	SERF2	P84101	59 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	FAM122C	Q6P4D5	195 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	PQLC2	Q6ZP29	291 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	ZNF493	Q6ZR52	646 aa		11.87	□□□□□ -0.51
CCND3-222	ENST00000612455	HSD17B11	Q8NBQ5	300 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 74 ms