RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 ZNF492Q9P255 531 aa8.75□□□□□ -1.01
CDH4-202ENST00000611855 SMPXQ9UHP9 88 aa8.75□□□□□ -1.01
CDH4-202ENST00000611855 ZNF785A8K8V0 405 aa8.75□□□□□ -1.01
CDH4-202ENST00000611855 HBDP02042 147 aa8.75□□□□□ -1.01
CDH4-202ENST00000611855 C20orf78Q9BR46 151 aa8.75□□□□□ -1.01
CDH4-202ENST00000611855 GFRA4Q9GZZ7 299 aa8.75□□□□□ -1.01
CDH4-202ENST00000611855 IGLV2-23P01705 113 aa8.74□□□□□ -1.01
CDH4-202ENST00000611855 IGHG3P01860 377 aa8.74□□□□□ -1.01
CDH4-202ENST00000611855 SCGB1A1P11684 91 aa8.74□□□□□ -1.01
CDH4-202ENST00000611855 THAP8Q8NA92 274 aa8.74□□□□□ -1.01
CDH4-202ENST00000611855 FAM222BQ8WU58 562 aa8.74□□□□□ -1.01
CDH4-202ENST00000611855 CKS2P33552 79 aa8.74□□□□□ -1.01
CDH4-202ENST00000611855 NDUFS7O75251 213 aa8.74□□□□□ -1.01
CDH4-202ENST00000611855 CD59P13987 128 aa8.74□□□□□ -1.01
CDH4-202ENST00000611855 LYZL1Q6UWQ5 148 aa8.74□□□□□ -1.01
CDH4-202ENST00000611855 C8orf49Q96NF6 230 aa8.74□□□□□ -1.01
CDH4-202ENST00000611855 ANKRD11Q6UB99 2663 aaPredicted RBP8.73□□□□□ -1.01
CDH4-202ENST00000611855 IGLV2-11P01706 119 aa8.73□□□□□ -1.01
CDH4-202ENST00000611855 ASH1LQ9NR48 2969 aaKnown RBP8.73□□□□□ -1.01
CDH4-202ENST00000611855 HIGD1AQ9Y241 93 aa8.73□□□□□ -1.01
CDH4-202ENST00000611855 LINC00312Q9Y6C7 94 aa8.73□□□□□ -1.01
CDH4-202ENST00000611855 SPTBN1Q01082 2364 aaKnown RBP8.73□□□□□ -1.01
CDH4-202ENST00000611855 DCHS2Q6V1P9 2916 aa8.73□□□□□ -1.01
CDH4-202ENST00000611855 SPTBN4Q9H254 2564 aa8.73□□□□□ -1.01
CDH4-202ENST00000611855 MC5RP33032 325 aa8.73□□□□□ -1.01
CDH4-202ENST00000611855 ATP5IP56385 69 aaPredicted RBP8.73□□□□□ -1.01
CDH4-202ENST00000611855 ORMDL3Q8N138 153 aa8.73□□□□□ -1.01
CDH4-202ENST00000611855 TMEM160Q9NX00 188 aa8.73□□□□□ -1.01
CDH4-202ENST00000611855 VMA21Q3ZAQ7 101 aa8.72□□□□□ -1.01
CDH4-202ENST00000611855 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
CDH4-202ENST00000611855 TRBV25-1A0A075B6N4 114 aa8.72□□□□□ -1.01
CDH4-202ENST00000611855 SIVA1O15304 175 aa8.72□□□□□ -1.01
CDH4-202ENST00000611855 NPYP01303 97 aa8.72□□□□□ -1.01
CDH4-202ENST00000611855 SLC25A39Q9BZJ4 359 aaPredicted RBP8.72□□□□□ -1.01
CDH4-202ENST00000611855 IGLL5B9A064 214 aa8.72□□□□□ -1.01
CDH4-202ENST00000611855 EVI2AP22794 236 aa8.72□□□□□ -1.01
CDH4-202ENST00000611855 RPL27AP46776 148 aaKnown RBP8.72□□□□□ -1.01
CDH4-202ENST00000611855 CRIP1P50238 77 aa8.72□□□□□ -1.01
CDH4-202ENST00000611855 ZC2HC1BQ5TFG8 222 aa8.72□□□□□ -1.01
CDH4-202ENST00000611855 FOXC2Q99958 501 aa8.72□□□□□ -1.01
CDH4-202ENST00000611855 SPTA1P02549 2419 aa8.72□□□□□ -1.01
CDH4-202ENST00000611855 TMEM189A5PLL7 270 aa8.71□□□□□ -1.01
CDH4-202ENST00000611855 TM4SF5O14894 197 aa8.71□□□□□ -1.01
CDH4-202ENST00000611855 CT45A10P0DMU9 189 aa8.71□□□□□ -1.01
CDH4-202ENST00000611855 MRGPRG-AS1Q2M3A8 158 aa8.71□□□□□ -1.01
CDH4-202ENST00000611855 DEFB109BQ30KR1 87 aa8.71□□□□□ -1.01
CDH4-202ENST00000611855 C8orf46Q8TAG6 207 aa8.71□□□□□ -1.01
CDH4-202ENST00000611855 TMEM133Q9H2Q1 129 aa8.71□□□□□ -1.01
CDH4-202ENST00000611855 RELNP78509 3460 aa8.71□□□□□ -1.01
CDH4-202ENST00000611855 IGLV3-9A0A075B6K5 115 aa8.71□□□□□ -1.02
CDH4-202ENST00000611855 OVOL3O00110 214 aa8.71□□□□□ -1.02
CDH4-202ENST00000611855 CDX4O14627 284 aaPredicted RBP8.71□□□□□ -1.02
CDH4-202ENST00000611855 TWIST1Q15672 202 aa8.71□□□□□ -1.02
CDH4-202ENST00000611855 MRPL51Q4U2R6 128 aaKnown RBP8.71□□□□□ -1.02
CDH4-202ENST00000611855 FOXI2Q6ZQN5 318 aa8.71□□□□□ -1.02
CDH4-202ENST00000611855 SYT8Q8NBV8 401 aa8.71□□□□□ -1.02
CDH4-202ENST00000611855 DPF1Q92782 380 aa8.71□□□□□ -1.02
CDH4-202ENST00000611855 MRAP2Q96G30 205 aa8.71□□□□□ -1.02
CDH4-202ENST00000611855 SRSF8Q9BRL6 282 aaKnown RBP8.71□□□□□ -1.02
CDH4-202ENST00000611855 FBXL15Q9H469 300 aa8.71□□□□□ -1.02
CDH4-202ENST00000611855 IGHV3OR16-8A0A075B7F1 116 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 F8W1H4 67 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 APOMO95445 188 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 SPINK8P0C7L1 97 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 GATA3P23771 443 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 KLF17Q5JT82 389 aaPredicted RBP8.7□□□□□ -1.02
CDH4-202ENST00000611855 IGFL4Q6B9Z1 124 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 HIST1H4GQ99525 98 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 SS18L2Q9UHA2 77 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 C16orf97H3BN30 126 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 LEPP41159 167 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 GATA4P43694 442 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 ZNF48Q96MX3 618 aaPredicted RBP8.7□□□□□ -1.02
CDH4-202ENST00000611855 TRGV9Q99603 122 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 OTORQ9NRC9 128 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 PSG8Q9UQ74 426 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 AKAP13Q12802 2813 aa8.7□□□□□ -1.02
CDH4-202ENST00000611855 TRAV17A0A0B4J275 112 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 PRRG2O14669 202 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 COX7A1P24310 79 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 PLGLAQ15195 96 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 FAM104BQ5XKR9 115 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 CEND1Q8N111 149 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 SPATA25Q9BR10 227 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 GAS8-AS1O95177 125 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 CD40P25942 277 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 GLMPQ8WWB7 406 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 RASL11BQ9BPW5 248 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 CTSZQ9UBR2 303 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 PRSS33Q8NF86 280 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 Q8TAT8 98 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 ZNF418Q8TF45 676 aaPredicted RBP8.69□□□□□ -1.02
CDH4-202ENST00000611855 LINC00574Q9H8X3 128 aa8.69□□□□□ -1.02
CDH4-202ENST00000611855 AKAP6Q13023 2319 aa8.68□□□□□ -1.02
CDH4-202ENST00000611855 TRAV40A0A0B4J280 105 aa8.68□□□□□ -1.02
CDH4-202ENST00000611855 TGFAP01135 160 aa8.68□□□□□ -1.02
CDH4-202ENST00000611855 MT-ATP8P03928 68 aa8.68□□□□□ -1.02
CDH4-202ENST00000611855 CRYGCP07315 174 aa8.68□□□□□ -1.02
CDH4-202ENST00000611855 C12orf74Q32Q52 190 aa8.68□□□□□ -1.02
CDH4-202ENST00000611855 PHLDA1Q8WV24 401 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms