RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 SIGLEC15Q6ZMC9 328 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 IGFBPL1Q8WX77 278 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 C17orf77Q96MU5 243 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 TFPI2P48307 235 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 NMUP48645 174 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 TM4SF20Q53R12 229 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 WFDC3Q8IUB2 231 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 MBD6Q96DN6 1003 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 ST20Q9HBF5 79 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 FN1P02751 2386 aaKnown RBP5.03□□□□□ -1.6
SNX13-213ENST00000611725 D6R8Y8 96 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 HBDP02042 147 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 CTSGP08311 255 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 PAX8Q06710 450 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 C18orf15Q96N68 181 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 SYS1-DBNDD2H3BUS1 97 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 M0R381 172 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 FSTL3O95633 263 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 IGLV11-55A0A075B6I3 123 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 IGHV2-70DA0A0C4DH43 119 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 NDUFA3O95167 84 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 LINC00310P59036 64 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 DTX2Q86UW9 622 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 AMN1Q8IY45 258 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 OR4C5Q8NGB2 326 aa5.03□□□□□ -1.6
SNX13-213ENST00000611725 H3BUX3 64 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 NDPQ00604 133 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 PAX2Q02962 417 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 C9orf139Q6ZV77 190 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 ZC2HC1AQ96GY0 325 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 PHLDA3Q9Y5J5 127 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 SNAI2O43623 268 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 SH2D1AO60880 128 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 NCR2O95944 276 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 TGFAP01135 160 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 TDRG1Q3Y452 100 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 TMEM75Q8N9X5 138 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 TNFRSF13BO14836 293 aaPredicted RBP5.02□□□□□ -1.61
SNX13-213ENST00000611725 TCF21O43680 179 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 ID1P41134 155 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 FANCD2OSQ96PS1 177 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 MLST8Q9BVC4 326 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 SZT2Q5T011 3432 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 IGHV7-81A0A0B4J1V7 117 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 DPF1Q92782 380 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 CCL19Q99731 98 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 PSMB11A5LHX3 300 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 TSPOP30536 169 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 CACNG7P62955 275 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 LY6G5BQ8NDX9 201 aa5.02□□□□□ -1.61
SNX13-213ENST00000611725 MAP1AP78559 2803 aaPredicted RBP5.01□□□□□ -1.61
SNX13-213ENST00000611725 TMEM213A2RRL7 107 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 A6NDN8 102 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 A6NNC1 897 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 FAM104BQ5XKR9 115 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 TTC9CQ8N5M4 171 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 NPBQ8NG41 125 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 NPFFR1Q9GZQ6 430 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 NXT2Q9NPJ8 142 aaKnown RBP5.01□□□□□ -1.61
SNX13-213ENST00000611725 TP53TG3Q9ULZ0 132 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 MYCNOSP40205 109 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 FBLN7Q53RD9 439 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 MYOZ3Q8TDC0 251 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 TNRC6AQ8NDV7 1962 aaKnown RBP5.01□□□□□ -1.61
SNX13-213ENST00000611725 ZFP36P26651 326 aaKnown RBP5.01□□□□□ -1.61
SNX13-213ENST00000611725 UQCRFS1P47985 274 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 GAGE1Q13065 139 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 IFI27L1Q96BM0 104 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 HECTD1Q9ULT8 2610 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 B4DSR2 109 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 MGPP08493 103 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 MPV17L2Q567V2 206 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 CFHR4Q92496 578 aa5.01□□□□□ -1.61
SNX13-213ENST00000611725 DSPP15924 2871 aaKnown RBP5.01□□□□□ -1.61
SNX13-213ENST00000611725 IGLL1P15814 213 aa5□□□□□ -1.61
SNX13-213ENST00000611725 PSMG4Q5JS54 123 aa5□□□□□ -1.61
SNX13-213ENST00000611725 MCRIP2Q9BUT9 160 aaKnown RBP5□□□□□ -1.61
SNX13-213ENST00000611725 PRSS22Q9GZN4 317 aa5□□□□□ -1.61
SNX13-213ENST00000611725 CFAP54Q96N23 3096 aa5□□□□□ -1.61
SNX13-213ENST00000611725 EBLN2Q6P2I7 272 aa5□□□□□ -1.61
SNX13-213ENST00000611725 GTSF1Q8WW33 167 aa5□□□□□ -1.61
SNX13-213ENST00000611725 EML6Q6ZMW3 1958 aa5□□□□□ -1.61
SNX13-213ENST00000611725 SORL1Q92673 2214 aa5□□□□□ -1.61
SNX13-213ENST00000611725 VPS13AQ96RL7 3174 aa5□□□□□ -1.61
SNX13-213ENST00000611725 C19orf71A6NCJ1 209 aa5□□□□□ -1.61
SNX13-213ENST00000611725 CBY3A6NI87 242 aa5□□□□□ -1.61
SNX13-213ENST00000611725 CRYGBP07316 175 aa5□□□□□ -1.61
SNX13-213ENST00000611725 ASIPP42127 132 aa5□□□□□ -1.61
SNX13-213ENST00000611725 LINC00322Q6ZN03 302 aaPredicted RBP5□□□□□ -1.61
SNX13-213ENST00000611725 KLK15Q9H2R5 256 aa5□□□□□ -1.61
SNX13-213ENST00000611725 OVOL3O00110 214 aa5□□□□□ -1.61
SNX13-213ENST00000611725 CENPVL3A0A0U1RRI6 287 aa5□□□□□ -1.61
SNX13-213ENST00000611725 DMRTA1Q5VZB9 504 aa5□□□□□ -1.61
SNX13-213ENST00000611725 COL5A1P20908 1838 aaPredicted RBP5□□□□□ -1.61
SNX13-213ENST00000611725 HAX1O00165 279 aa5□□□□□ -1.61
SNX13-213ENST00000611725 ZNF502Q8TBZ5 544 aa5□□□□□ -1.61
SNX13-213ENST00000611725 CBY1Q9Y3M2 126 aa5□□□□□ -1.61
SNX13-213ENST00000611725 IGHV1-69DA0A0B4J2H0 117 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 hDV102S1A0JD36 115 aa4.99□□□□□ -1.61
SNX13-213ENST00000611725 OR11H12B2RN74 326 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms