RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 FHL3Q13643 280 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 ABHD12Q8N2K0 398 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 SYT8Q8NBV8 401 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 NDFIP1Q9BT67 221 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 UFC1Q9Y3C8 167 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 LSM4Q9Y4Z0 139 aaKnown RBP12.68□□□□□ -0.38
RTN1-209ENST00000611068 ZFHX3Q15911 3703 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 GCSHP23434 173 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 PPIFP30405 207 aaKnown RBP12.68□□□□□ -0.38
RTN1-209ENST00000611068 TMEM155Q4W5P6 130 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 ZNF503Q96F45 646 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 GRAMD2BQ96HH9 432 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 TNCP24821 2201 aa12.68□□□□□ -0.38
RTN1-209ENST00000611068 IGHV1-8P0DP01 117 aa12.67□□□□□ -0.38
RTN1-209ENST00000611068 XGP55808 180 aa12.67□□□□□ -0.38
RTN1-209ENST00000611068 ANAPC13Q9BS18 74 aa12.67□□□□□ -0.38
RTN1-209ENST00000611068 ZNF747Q9BV97 191 aa12.67□□□□□ -0.38
RTN1-209ENST00000611068 DLX6P56179 175 aa12.67□□□□□ -0.38
RTN1-209ENST00000611068 TTC9CQ8N5M4 171 aa12.67□□□□□ -0.38
RTN1-209ENST00000611068 OSR1Q8TAX0 266 aaPredicted RBP12.67□□□□□ -0.38
RTN1-209ENST00000611068 RAB9BQ9NP90 201 aa12.67□□□□□ -0.38
RTN1-209ENST00000611068 SRRM4A7MD48 611 aaKnown RBP12.66□□□□□ -0.38
RTN1-209ENST00000611068 TAS2R45P59539 299 aa12.66□□□□□ -0.38
RTN1-209ENST00000611068 DTX2Q86UW9 622 aa12.66□□□□□ -0.38
RTN1-209ENST00000611068 TIMD4Q96H15 378 aa12.66□□□□□ -0.38
RTN1-209ENST00000611068 LINC00574Q9H8X3 128 aa12.66□□□□□ -0.38
RTN1-209ENST00000611068 TMEM140Q9NV12 185 aa12.66□□□□□ -0.38
RTN1-209ENST00000611068 TNFRSF18Q9Y5U5 241 aa12.66□□□□□ -0.38
RTN1-209ENST00000611068 OR4X2Q8NGF9 303 aa12.66□□□□□ -0.38
RTN1-209ENST00000611068 OR9G4Q8NGQ1 327 aa12.66□□□□□ -0.38
RTN1-209ENST00000611068 PHLDA1Q8WV24 401 aaPredicted RBP12.66□□□□□ -0.38
RTN1-209ENST00000611068 TM2D2Q9BX73 214 aa12.66□□□□□ -0.38
RTN1-209ENST00000611068 CYSLTR1Q9Y271 337 aa12.66□□□□□ -0.38
RTN1-209ENST00000611068 A8MWL6 223 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 PRSS46E5RG02 174 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 CHEK1O14757 476 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 PLXNB1O43157 2135 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 FBN2P35556 2912 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 FNDC10F2Z333 226 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 ID1P41134 155 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 NMUP48645 174 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 ERVK-16P61578 105 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 HBBP68871 147 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 ANXA2RQ3ZCQ2 193 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 BCL6BQ8N143 479 aaPredicted RBP12.65□□□□□ -0.38
RTN1-209ENST00000611068 RITA1Q96K30 269 aa12.65□□□□□ -0.38
RTN1-209ENST00000611068 ENSAO43768 121 aaKnown RBP12.64□□□□□ -0.39
RTN1-209ENST00000611068 KLRD1Q13241 179 aa12.64□□□□□ -0.39
RTN1-209ENST00000611068 C1QTNF4Q9BXJ3 329 aa12.64□□□□□ -0.39
RTN1-209ENST00000611068 TET2Q6N021 2002 aaPredicted RBP12.64□□□□□ -0.39
RTN1-209ENST00000611068 J3KRW8 73 aa12.64□□□□□ -0.39
RTN1-209ENST00000611068 SSBP2P81877 361 aaPredicted RBP12.64□□□□□ -0.39
RTN1-209ENST00000611068 Q6ZUT4 128 aa12.64□□□□□ -0.39
RTN1-209ENST00000611068 HEYLQ9NQ87 328 aaPredicted RBP12.64□□□□□ -0.39
RTN1-209ENST00000611068 UBR5O95071 2799 aaPredicted RBP12.63□□□□□ -0.39
RTN1-209ENST00000611068 COL8A1P27658 744 aa12.63□□□□□ -0.39
RTN1-209ENST00000611068 OR8A1Q8NGG7 326 aa12.63□□□□□ -0.39
RTN1-209ENST00000611068 TMEM133Q9H2Q1 129 aa12.63□□□□□ -0.39
RTN1-209ENST00000611068 PLEKHA3Q9HB20 300 aa12.63□□□□□ -0.39
RTN1-209ENST00000611068 PRO0461Q9UI25 63 aa12.63□□□□□ -0.39
RTN1-209ENST00000611068 ZFP36P26651 326 aaKnown RBP12.63□□□□□ -0.39
RTN1-209ENST00000611068 GLMPQ8WWB7 406 aa12.63□□□□□ -0.39
RTN1-209ENST00000611068 NHP2Q9NX24 153 aaKnown RBP12.63□□□□□ -0.39
RTN1-209ENST00000611068 SIGLEC8Q9NYZ4 499 aa12.63□□□□□ -0.39
RTN1-209ENST00000611068 SRSF1Q07955 248 aaKnown RBP eCLIP12.62□□□□□ -0.39
RTN1-209ENST00000611068 TTTY13Q9BZ97 58 aa12.62□□□□□ -0.39
RTN1-209ENST00000611068 BPESC1Q9GZL8 116 aa12.62□□□□□ -0.39
RTN1-209ENST00000611068 FAM231DQ6ZW35 169 aa12.62□□□□□ -0.39
RTN1-209ENST00000611068 ATP5L2Q7Z4Y8 100 aa12.62□□□□□ -0.39
RTN1-209ENST00000611068 TMEM167BQ9NRX6 74 aa12.62□□□□□ -0.39
RTN1-209ENST00000611068 TEX50A0A1B0GTY4 177 aa12.61□□□□□ -0.39
RTN1-209ENST00000611068 E9PLD3 99 aa12.61□□□□□ -0.39
RTN1-209ENST00000611068 GAGE13Q4V321 117 aa12.61□□□□□ -0.39
RTN1-209ENST00000611068 DPF1Q92782 380 aa12.61□□□□□ -0.39
RTN1-209ENST00000611068 PGLYRP4Q96LB8 373 aa12.61□□□□□ -0.39
RTN1-209ENST00000611068 SGK494Q96LW2 274 aa12.61□□□□□ -0.39
RTN1-209ENST00000611068 ABCA12Q86UK0 2595 aa12.61□□□□□ -0.39
RTN1-209ENST00000611068 FAM106CPP0CH98 169 aa12.61□□□□□ -0.39
RTN1-209ENST00000611068 FAM106AQ4KMX7 169 aa12.61□□□□□ -0.39
RTN1-209ENST00000611068 ZNF833PQ6ZTB9 187 aa12.61□□□□□ -0.39
RTN1-209ENST00000611068 OR9G1Q8NH87 305 aa12.61□□□□□ -0.39
RTN1-209ENST00000611068 A0A1B0GWB2 263 aa12.6□□□□□ -0.39
RTN1-209ENST00000611068 APOMO95445 188 aa12.6□□□□□ -0.39
RTN1-209ENST00000611068 LTAP01374 205 aa12.6□□□□□ -0.39
RTN1-209ENST00000611068 NHLRC4P0CG21 123 aaPredicted RBP12.6□□□□□ -0.39
RTN1-209ENST00000611068 HARBI1Q96MB7 349 aa12.6□□□□□ -0.39
RTN1-209ENST00000611068 APOHP02749 345 aaPredicted RBP12.6□□□□□ -0.39
RTN1-209ENST00000611068 APELAP0DMC3 54 aa12.6□□□□□ -0.39
RTN1-209ENST00000611068 EFNA4P52798 201 aa12.6□□□□□ -0.39
RTN1-209ENST00000611068 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.6□□□□□ -0.39
RTN1-209ENST00000611068 IGLL5B9A064 214 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 IGHV4-39P01824 125 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 SAA1P0DJI8 122 aaPredicted RBP12.59□□□□□ -0.39
RTN1-209ENST00000611068 CACNG7P62955 275 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 FOXI1Q12951 378 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 MOB3BQ86TA1 216 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 PRSS29PA6NIE9 313 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 CNTFRP26992 372 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 PRR20EP86478 221 aa12.59□□□□□ -0.39
RTN1-209ENST00000611068 PRR20CP86479 221 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms