RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 CLDN25C9JDP6 229 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 TRAPPC2LH3BP13 241 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 BPGMP07738 259 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 MSNP26038 577 aaKnown RBP1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 SRIP30626 198 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 RPL28P46779 137 aaKnown RBP1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 YPEL3P61236 119 aaPredicted RBP1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 KISS1Q15726 138 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 RRN3P1Q2M238 152 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 LYRM7Q5U5X0 104 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 DCUN1D2Q6PH85 259 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 ZNF767PQ75MW2 155 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 MIR17HGQ75NE6 70 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 MSRB3Q8IXL7 192 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 RPP25LQ8N5L8 163 aaKnown RBP1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 OR5C1Q8NGR4 320 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 PFN4Q8NHR9 129 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 FGF13Q92913 245 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 SLAMF6Q96DU3 332 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 TVP23CQ96ET8 276 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 SCGB3A1Q96QR1 104 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 Q9BRP9 147 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 PBDC1Q9BVG4 233 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 MAP1LC3BQ9GZQ8 125 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 HHLA3Q9XRX5 114 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 PCDH15Q96QU1 1955 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 TNRC6BQ9UPQ9 1833 aaKnown RBP1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 CSMD1Q96PZ7 3565 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 F5P12259 2224 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 CREBBPQ92793 2442 aa1.35□□□□□ -2.19
CCDC144B-206ENST00000609959 MYH4Q9Y623 1939 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 PCNX1Q96RV3 2341 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 ADGRG4Q8IZF6 3080 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 OTOGQ6ZRI0 2925 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 F8P00451 2351 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 NAV3Q8IVL0 2385 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 CELSR1Q9NYQ6 3014 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 IGHV3-64A0A075B6Q5 118 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 SPAARA0A1B0GVQ0 90 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 DUXBA0A1W2PPF3 345 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 MEIS3P1A6NDR6 274 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 TMEM212A6NML5 194 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 RIIAD1A6NNX1 92 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 H3BT86 120 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 H7C2G1 150 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 IGKV1-16P04430 117 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 CSN2P05814 226 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 S100A4P26447 101 aaKnown RBP1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 FUSP35637 526 aaKnown RBP eCLIP1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 GLRXP35754 106 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 FXYD2P54710 66 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 BRD3OSQ6XYD6 125 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 Q6ZS52 159 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 TRAPPC6BQ86SZ2 158 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 CLVS1Q8IUQ0 354 aaPredicted RBP1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 DEFB124Q8NES8 71 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 OR5J2Q8NH18 312 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 ADAT3Q96EY9 351 aaPredicted RBP1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 DNAJC30Q96LL9 226 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 RTL8AQ9BWD3 113 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 LRTM1Q9HBL6 345 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 SLC39A9Q9NUM3 307 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 PRO2289Q9P1D8 64 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 CCL26Q9Y258 94 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 ERGIC3Q9Y282 383 aa1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 NYNRINQ9P2P1 1898 aaKnown RBP1.34□□□□□ -2.19
CCDC144B-206ENST00000609959 AHCTF1Q8WYP5 2266 aa1.34□□□□□ -2.2
CCDC144B-206ENST00000609959 USP9YO00507 2555 aaPredicted RBP1.34□□□□□ -2.2
CCDC144B-206ENST00000609959 NF1P21359 2839 aa1.34□□□□□ -2.2
CCDC144B-206ENST00000609959 BOD1L1Q8NFC6 3051 aa1.34□□□□□ -2.2
CCDC144B-206ENST00000609959 ICE1Q9Y2F5 2266 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 POLQO75417 2590 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 PTPRDP23468 1912 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 SHANK1Q9Y566 2161 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 IGHV1-18A0A0C4DH31 117 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 IGKV2-24A0A0C4DH68 120 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 IGKV1-9A0A0C4DH69 117 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 TRBV10-2A0A0K0K1G8 114 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 FUOMA2VDF0 154 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 ZNF860A6NHJ4 632 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 TSTD3H0UI37 97 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 SLC22A1O15245 554 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 PFDN1O60925 122 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 APOA2P02652 100 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 CTSGP08311 255 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 COX6A1P12074 109 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 CD52P31358 61 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 RNASE4P34096 147 aaKnown RBP1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 CCR2P41597 374 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 DEFA3P59666 94 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 SUPT4H1P63272 117 aaKnown RBP1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 ZNF90Q03938 601 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 BAMBIQ13145 260 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 RHEBQ15382 184 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 AGTRAPQ6RW13 159 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 HIST3H2BBQ8N257 126 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 FAM24BQ8N5W8 94 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 C12orf29Q8N999 325 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 LINC00304Q8N9R0 145 aa1.33□□□□□ -2.2
CCDC144B-206ENST00000609959 OR52R1Q8NGF1 315 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms