RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 CUL9Q8IWT3 2517 aa3.76□□□□□ -1.81
HDDC2-208ENST00000609021 A0A087WWL8 130 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 IGKV1D-33P01593 117 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 IGKV1-33P01594 117 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 COX6CP09669 75 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 GP9P14770 177 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 ASPHD1Q5U4P2 390 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 SLC25A48Q6ZT89 311 aaKnown RBP3.75□□□□□ -1.81
HDDC2-208ENST00000609021 WFDC3Q8IUB2 231 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 ZNF689Q96CS4 500 aaPredicted RBP3.75□□□□□ -1.81
HDDC2-208ENST00000609021 PAXXQ9BUH6 204 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 TNRC6BQ9UPQ9 1833 aaKnown RBP3.75□□□□□ -1.81
HDDC2-208ENST00000609021 MYBPHLA2RUH7 354 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 RNF223E7ERA6 249 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 RPL18Q07020 188 aaKnown RBP3.75□□□□□ -1.81
HDDC2-208ENST00000609021 CIRBPQ14011 172 aaKnown RBP3.75□□□□□ -1.81
HDDC2-208ENST00000609021 NSUN5P1Q3KNT7 163 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 FAM120AOSQ5T036 256 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 COL27A1Q8IZC6 1860 aaPredicted RBP3.75□□□□□ -1.81
HDDC2-208ENST00000609021 OVCA2Q8WZ82 227 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 KIAA0100Q14667 2235 aaKnown RBP3.75□□□□□ -1.81
HDDC2-208ENST00000609021 NUP210LQ5VU65 1888 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 INS-IGF2F8WCM5 200 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 SPRY3O43610 288 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 ARL14EPLP0DKL9 152 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 UBE2E1P51965 193 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 HILS1P60008 231 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 CTXN1P60606 82 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 ZNF672Q499Z4 452 aaPredicted RBP3.75□□□□□ -1.81
HDDC2-208ENST00000609021 PLA2G2CQ5R387 149 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 NEXN-AS1Q8NBZ9 246 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 UBE2E2Q96LR5 201 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 PRSS27Q9BQR3 290 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 TTTY13Q9BZ97 58 aa3.75□□□□□ -1.81
HDDC2-208ENST00000609021 FRYLO94915 3013 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 TMEM14DPA8MWL7 114 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 LY6LH3BQJ8 138 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 H7C2G1 150 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 IGHV4-39P01824 125 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 HBDP02042 147 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 SAA4P35542 130 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 VEGFBP49765 207 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 IGFL2Q6UWQ7 119 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 ZNF793Q6ZN11 406 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 MARCH3Q86UD3 253 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 TMEM52Q8NDY8 209 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 CYYR1Q96J86 154 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 C17orf77Q96MU5 243 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 LIME1Q9H400 295 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 ARHGAP21Q5T5U3 1957 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 TCF20Q9UGU0 1960 aaKnown RBP3.74□□□□□ -1.81
HDDC2-208ENST00000609021 CNTRLQ7Z7A1 2325 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 VPS13AQ96RL7 3174 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 LOC389332A0A1B0GUA5 103 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 F6UB75 175 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 LYPD3O95274 346 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 HOXD3P31249 432 aaPredicted RBP3.74□□□□□ -1.81
HDDC2-208ENST00000609021 MIC13Q5XKP0 118 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 PLXDC1Q8IUK5 500 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 SBSPONQ8IVN8 264 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 POM121L12Q8N7R1 296 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 PLAC8L1A1L4L8 177 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 LMO2P25791 158 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 RPL18AQ02543 176 aaKnown RBP3.74□□□□□ -1.81
HDDC2-208ENST00000609021 PAX8Q06710 450 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 Q6P435 159 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 ZNF503Q96F45 646 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 PRDM6Q9NQX0 595 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 PCDH15Q96QU1 1955 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 NCOA6Q14686 2063 aaPredicted RBP3.74□□□□□ -1.81
HDDC2-208ENST00000609021 ALPK2Q86TB3 2170 aa3.74□□□□□ -1.81
HDDC2-208ENST00000609021 CABIN1Q9Y6J0 2220 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 LINC01548A6NM66 108 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 MRPS12O15235 138 aaKnown RBP3.73□□□□□ -1.81
HDDC2-208ENST00000609021 CCL16O15467 120 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 IGHG2P01859 326 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 IFI27P40305 119 aaPredicted RBP3.73□□□□□ -1.81
HDDC2-208ENST00000609021 SUB1P53999 127 aaKnown RBP eCLIP3.73□□□□□ -1.811e-323■■■■■ 87.7
HDDC2-208ENST00000609021 TREML4Q6UXN2 200 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 TMEM167BQ9NRX6 74 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 ANAPC10Q9UM13 185 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 KIF26BQ2KJY2 2108 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 TRGV5A0A0B4J1U4 118 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 RBMY1BA6NDE4 496 aaKnown RBP3.73□□□□□ -1.81
HDDC2-208ENST00000609021 RBMY1EA6NEQ0 496 aaKnown RBP3.73□□□□□ -1.81
HDDC2-208ENST00000609021 UBE2L6O14933 153 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 EPPINO95925 133 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 RBMY1DP0C7P1 496 aaKnown RBP3.73□□□□□ -1.81
HDDC2-208ENST00000609021 RBMY1A1P0DJD3 496 aaKnown RBP3.73□□□□□ -1.81
HDDC2-208ENST00000609021 RBMY1CP0DJD4 496 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 SLC25A16P16260 332 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 MRPS36P82909 103 aaKnown RBP3.73□□□□□ -1.81
HDDC2-208ENST00000609021 EBI3Q14213 229 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 RBMY1FQ15415 496 aaKnown RBP3.73□□□□□ -1.81
HDDC2-208ENST00000609021 TMEM52BQ4KMG9 183 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 FAM104BQ5XKR9 115 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 FAM90A1Q86YD7 464 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 MPLKIPQ8TAP9 179 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 NPCDR1Q9BY65 106 aa3.73□□□□□ -1.81
HDDC2-208ENST00000609021 PLXNB1O43157 2135 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms