RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 HLA-DRB4P13762 266 aa9.96□□□□□ -0.81
CTCFL-218ENST00000608440 C3orf36Q3SXR2 165 aa9.96□□□□□ -0.81
CTCFL-218ENST00000608440 LEAP2Q969E1 77 aa9.96□□□□□ -0.81
CTCFL-218ENST00000608440 RITA1Q96K30 269 aa9.96□□□□□ -0.81
CTCFL-218ENST00000608440 METRNQ9UJH8 293 aa9.96□□□□□ -0.81
CTCFL-218ENST00000608440 HLA-DRB4X5D2U9 266 aa9.96□□□□□ -0.81
CTCFL-218ENST00000608440 COL27A1Q8IZC6 1860 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-218ENST00000608440 DOCK7Q96N67 2140 aa9.96□□□□□ -0.82
CTCFL-218ENST00000608440 RIF1Q5UIP0 2472 aaKnown RBP9.96□□□□□ -0.82
CTCFL-218ENST00000608440 MYMXA0A1B0GTQ4 84 aa9.96□□□□□ -0.82
CTCFL-218ENST00000608440 TCF15Q12870 199 aa9.96□□□□□ -0.82
CTCFL-218ENST00000608440 C1orf229Q6ZS94 237 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-218ENST00000608440 ZNF826PQ6ZT77 177 aa9.96□□□□□ -0.82
CTCFL-218ENST00000608440 DEFB126Q9BYW3 111 aa9.96□□□□□ -0.82
CTCFL-218ENST00000608440 TMEM14BQ9NUH8 114 aa9.96□□□□□ -0.82
CTCFL-218ENST00000608440 C21orf62Q9NYP8 219 aa9.96□□□□□ -0.82
CTCFL-218ENST00000608440 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.82
CTCFL-218ENST00000608440 ZFHX2Q9C0A1 2572 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-218ENST00000608440 A0A1W2PNU3 283 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-218ENST00000608440 NDUFA3O95167 84 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 MRPL51Q4U2R6 128 aaKnown RBP9.95□□□□□ -0.82
CTCFL-218ENST00000608440 GOLT1AQ6ZVE7 132 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 PRSS33Q8NF86 280 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 TMEM126AQ9H061 195 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 IFI27L2Q9H2X8 130 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 DOCK10Q96BY6 2186 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 DLL1O00548 723 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 CELA2AP08217 269 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 CCL3P10147 92 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 PLGLB1Q02325 96 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 TWIST1Q15672 202 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 Q86TA4 180 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 C15orf53Q8NAA6 179 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 Q9H3A6 140 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 FOXA2Q9Y261 457 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-218ENST00000608440 DMXL1Q9Y485 3027 aa9.95□□□□□ -0.82
CTCFL-218ENST00000608440 FAM104BQ5XKR9 115 aa9.94□□□□□ -0.82
CTCFL-218ENST00000608440 LINC01587Q99440 93 aa9.94□□□□□ -0.82
CTCFL-218ENST00000608440 SCGB1C2P0DMR2 95 aa9.94□□□□□ -0.82
CTCFL-218ENST00000608440 ZNF134P52741 427 aa9.94□□□□□ -0.82
CTCFL-218ENST00000608440 CD69Q07108 199 aa9.94□□□□□ -0.82
CTCFL-218ENST00000608440 UTF1Q5T230 341 aa9.94□□□□□ -0.82
CTCFL-218ENST00000608440 OR1L4Q8NGR5 311 aa9.94□□□□□ -0.82
CTCFL-218ENST00000608440 RTL8AQ9BWD3 113 aa9.94□□□□□ -0.82
CTCFL-218ENST00000608440 NCBP2LA6PVI3 153 aaKnown RBP9.93□□□□□ -0.82
CTCFL-218ENST00000608440 LYZL1Q6UWQ5 148 aa9.93□□□□□ -0.82
CTCFL-218ENST00000608440 DEFB124Q8NES8 71 aa9.93□□□□□ -0.82
CTCFL-218ENST00000608440 OR10J6PQ8NGY7 276 aa9.93□□□□□ -0.82
CTCFL-218ENST00000608440 CNOT1A5YKK6 2376 aaKnown RBP9.93□□□□□ -0.82
CTCFL-218ENST00000608440 ZNF785A8K8V0 405 aa9.93□□□□□ -0.82
CTCFL-218ENST00000608440 LIFP15018 202 aa9.93□□□□□ -0.82
CTCFL-218ENST00000608440 FOLR3P41439 243 aa9.93□□□□□ -0.82
CTCFL-218ENST00000608440 PCOLCEQ15113 449 aa9.93□□□□□ -0.82
CTCFL-218ENST00000608440 ZNF493Q6ZR52 646 aa9.93□□□□□ -0.82
CTCFL-218ENST00000608440 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
CTCFL-218ENST00000608440 Q8IYB0 196 aa9.93□□□□□ -0.82
CTCFL-218ENST00000608440 DNAJC30Q96LL9 226 aa9.93□□□□□ -0.82
CTCFL-218ENST00000608440 MDFICQ9P1T7 246 aa9.93□□□□□ -0.82
CTCFL-218ENST00000608440 PCNX2A6NKB5 2137 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 GAS8-AS1O95177 125 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 ASIPP42127 132 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 TMEM155Q4W5P6 130 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 TMEM78Q5T7P6 136 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 C6orf15Q6UXA7 325 aaPredicted RBP9.92□□□□□ -0.82
CTCFL-218ENST00000608440 EXOC3-AS1Q8N2X6 119 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 ZNF714Q96N38 554 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 C12orf49Q9H741 205 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 AAMDCQ9H7C9 122 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 NGBQ9NPG2 151 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 FAM186AA6NE01 2351 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 DSCAML1Q8TD84 2053 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 SHISA9B4DS77 424 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 FSTL3O95633 263 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 COX6A1P12074 109 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 PSMG4Q5JS54 123 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 TRGV9Q99603 122 aa9.92□□□□□ -0.82
CTCFL-218ENST00000608440 PRRC2CQ9Y520 2896 aaKnown RBP9.92□□□□□ -0.82
CTCFL-218ENST00000608440 IGHV1-45A0A0A0MS14 117 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 OOSP1A8MZH6 123 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 C9JAW5 83 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 RNASE2P10153 161 aaKnown RBP9.91□□□□□ -0.82
CTCFL-218ENST00000608440 CRIP2P52943 208 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-218ENST00000608440 UBE2D3P61077 147 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 UBE2D2P62837 147 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 PRR30Q53SZ7 412 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-218ENST00000608440 U3KQK5 164 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 LOC400499M0QZD8 3231 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 ZNF292O60281 2723 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 SLC25A20O43772 301 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 OR11H6Q8NGC7 330 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 URB1O60287 2271 aaKnown RBP9.91□□□□□ -0.82
CTCFL-218ENST00000608440 MRPL33O75394 65 aaKnown RBP9.91□□□□□ -0.82
CTCFL-218ENST00000608440 PRCDQ00LT1 54 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 Q6Q795 121 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 ODF3Q96PU9 254 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 OBP2BQ9NPH6 170 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 ONECUT1Q9UBC0 465 aa9.91□□□□□ -0.82
CTCFL-218ENST00000608440 KLK5Q9Y337 293 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-218ENST00000608440 ARFGEF3Q5TH69 2177 aa9.9□□□□□ -0.82
CTCFL-218ENST00000608440 GVINP1Q7Z2Y8 2422 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms