RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SPSB3Q6PJ21 355 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 LINC00479Q96M42 142 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 FABP5P3A8MUU1 101 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 MYOD1P15172 320 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 PVRIGQ6DKI7 326 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 LEPROTO15243 131 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 TREML4Q6UXN2 200 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 STHQ8IWL8 128 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 KIR2DL5BA0A0G2JN68 375 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 KIR2DL5BA0A0G2JPC4 375 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 KIR2DL5AQ8N109 375 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 ANKRD29Q8N6D5 301 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 TNRC6BQ9UPQ9 1833 aaKnown RBP7.13□□□□□ -1.27
CSMD1-216ENST00000602557 PFN1P07737 140 aaKnown RBP7.13□□□□□ -1.27
CSMD1-216ENST00000602557 SVIPQ8NHG7 77 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 LRRK2Q5S007 2527 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 LYNX1G3V0Z9 82 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 LYNX1P0DP58 116 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 YPEL1O60688 119 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 MORN3Q6PF18 240 aaPredicted RBP7.13□□□□□ -1.27
CSMD1-216ENST00000602557 YPEL2Q96QA6 119 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 NUP210Q8TEM1 1887 aaPredicted RBP7.13□□□□□ -1.27
CSMD1-216ENST00000602557 NEU4Q8WWR8 484 aaPredicted RBP7.13□□□□□ -1.27
CSMD1-216ENST00000602557 PEMTQ9UBM1 199 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 IMMP1LQ96LU5 166 aa7.13□□□□□ -1.27
CSMD1-216ENST00000602557 IGHV1-24A0A0C4DH33 117 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 SLC50A1Q9BRV3 221 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 CYYR1Q96J86 154 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 TIMM21Q9BVV7 248 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 PNRC2Q9NPJ4 139 aaKnown RBP7.12□□□□□ -1.27
CSMD1-216ENST00000602557 K7EMI3 77 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 LYL1P12980 280 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 SYNJ2BPP57105 145 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 C15orf32Q32M92 178 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 SIGLEC15Q6ZMC9 328 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 TMEM243Q9BU79 118 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 SLC25A16P16260 332 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 DUTP33316 252 aaKnown RBP7.12□□□□□ -1.27
CSMD1-216ENST00000602557 CARD19Q96LW7 228 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 TRGV4A0A0C4DH28 118 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 VWC2Q2TAL6 325 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 TDRG1Q3Y452 100 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 TIMM23O14925 209 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 ZNF329Q86UD4 541 aa7.12□□□□□ -1.27
CSMD1-216ENST00000602557 C22orf46C9J442 243 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 TMEM219Q86XT9 240 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 A0A0U1RQV1 116 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 PRCDQ00LT1 54 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 PIEZO1Q92508 2521 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 TMEM213A2RRL7 107 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 LINC00271P0C7V0 271 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 FGF6P10767 208 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 RNF183Q96D59 192 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 MYMXA0A1B0GTQ4 84 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 CHCHD5Q9BSY4 110 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 SPRR3Q9UBC9 169 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 RPUSD1Q9UJJ7 312 aaKnown RBP7.11□□□□□ -1.27
CSMD1-216ENST00000602557 SUMO4Q6EEV6 95 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 WDR83OSQ9Y284 106 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 TLN1Q9Y490 2541 aaKnown RBP7.11□□□□□ -1.27
CSMD1-216ENST00000602557 JPT2Q9H910 190 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 IGLC7A0M8Q6 106 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 KIAA1671Q9BY89 1806 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 THBDP07204 575 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 TMEM86BQ8N661 226 aa7.11□□□□□ -1.27
CSMD1-216ENST00000602557 IGF2RP11717 2491 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 EXPH5Q8NEV8 1989 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 NDUFC2O95298 119 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 NSUN5P1Q3KNT7 163 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 C11orf44Q8N8P7 122 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 OR11H6Q8NGC7 330 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 NMSQ5H8A3 153 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 TRGV11A0A075B6L2 103 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 TRAV3A0A0B4J244 114 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 TINCRA0A1B0GVN0 87 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 MMP23AO75900 390 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 IGKV1-5P01602 117 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 ARMS2P0C7Q2 107 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 C14orf178Q8N769 122 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-216ENST00000602557 SLC25A39Q9BZJ4 359 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-216ENST00000602557 ZNF883P0CG24 379 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 HLA-DRB4P13762 266 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 IGFL4Q6B9Z1 124 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 DUX4L9Q6RFH8 374 aaPredicted RBP7.1□□□□□ -1.27
CSMD1-216ENST00000602557 OVOL2Q9BRP0 275 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 HLA-DRB4X5D2U9 266 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 TRAV41A0A0B4J266 112 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 LINC01559Q495D7 138 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 ZNF581Q9P0T4 197 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 NCOR2Q9Y618 2525 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 FAM90A9PA6NNJ1 464 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 PMS2P5A8MQ11 134 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 PAX8Q06710 450 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 WFDC2Q14508 124 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 RBMY1FQ15415 496 aaKnown RBP7.1□□□□□ -1.27
CSMD1-216ENST00000602557 SPXQ9BT56 116 aa7.1□□□□□ -1.27
CSMD1-216ENST00000602557 IGHG4P01861 327 aa7.09□□□□□ -1.27
CSMD1-216ENST00000602557 C10orf55Q5SWW7 151 aa7.09□□□□□ -1.27
CSMD1-216ENST00000602557 FBLN5Q9UBX5 448 aa7.09□□□□□ -1.27
CSMD1-216ENST00000602557 LINC00527Q9UJ94 153 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms