RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 C10orf113Q5VZT2 155 aa9.16□□□□□ -0.94
RPS28-204ENST00000602140 LINC00612Q8N6U2 182 aa9.16□□□□□ -0.94
RPS28-204ENST00000602140 GNPNAT1Q96EK6 184 aaPredicted RBP9.16□□□□□ -0.94
RPS28-204ENST00000602140 SAT2Q96F10 170 aaPredicted RBP9.16□□□□□ -0.94
RPS28-204ENST00000602140 Q9H8V8 135 aa9.16□□□□□ -0.94
RPS28-204ENST00000602140 PXMP4Q9Y6I8 212 aa9.16□□□□□ -0.94
RPS28-204ENST00000602140 A0A0J9YY99 117 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 GAGE12BA1L429 117 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 ZNF701M0R085 212 aaPredicted RBP9.15□□□□□ -0.94
RPS28-204ENST00000602140 GAGE7O76087 117 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 GAGE12FP0CL80 117 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 GAGE12GP0CL81 117 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 GAGE12IP0CL82 117 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 M6PRP20645 277 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 CAMLGP49069 296 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 Q6ZRG5 221 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 NRARPQ7Z6K4 114 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 RXFP4Q8TDU9 374 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 DNAJC4Q9NNZ3 241 aa9.15□□□□□ -0.94
RPS28-204ENST00000602140 LSM5Q9Y4Y9 91 aaKnown RBP9.15□□□□□ -0.94
RPS28-204ENST00000602140 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 TRAV5A0A0B4J249 113 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 TRAV12-3A0A0B4J271 114 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 SNURFLB1AK76 121 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 CST7O76096 145 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 RLN2P04090 185 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 CT45A10P0DMU9 189 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 IL7P13232 177 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 HOXA5P20719 270 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 BCAP31P51572 246 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 RAB31Q13636 194 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 ZNF846Q147U1 533 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 CNPY1Q3B7I2 92 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 MIC13Q5XKP0 118 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 C20orf85Q9H1P6 137 aa9.14□□□□□ -0.95
RPS28-204ENST00000602140 FAM25EA8MYX2 175 aa9.13□□□□□ -0.95
RPS28-204ENST00000602140 NPIPB6E9PJ23 425 aa9.13□□□□□ -0.95
RPS28-204ENST00000602140 CDK2AP2O75956 126 aa9.13□□□□□ -0.95
RPS28-204ENST00000602140 LEPP41159 167 aa9.13□□□□□ -0.95
RPS28-204ENST00000602140 CAV2P51636 162 aa9.13□□□□□ -0.95
RPS28-204ENST00000602140 GUK1Q16774 197 aa9.13□□□□□ -0.95
RPS28-204ENST00000602140 OR1L4Q8NGR5 311 aa9.13□□□□□ -0.95
RPS28-204ENST00000602140 ZNF431Q8TF32 576 aaPredicted RBP9.13□□□□□ -0.95
RPS28-204ENST00000602140 ZNF503Q96F45 646 aa9.13□□□□□ -0.95
RPS28-204ENST00000602140 KRTAP1-5Q9BYS1 174 aa9.13□□□□□ -0.95
RPS28-204ENST00000602140 ABCA13Q86UQ4 5058 aa9.13□□□□□ -0.95
RPS28-204ENST00000602140 C5orf51A6NDU8 294 aa9.12□□□□□ -0.95
RPS28-204ENST00000602140 FAM24AA6NFZ4 105 aa9.12□□□□□ -0.95
RPS28-204ENST00000602140 PLA2G10O15496 165 aa9.12□□□□□ -0.95
RPS28-204ENST00000602140 ESRGQ1W209 222 aa9.12□□□□□ -0.95
RPS28-204ENST00000602140 TTC32Q5I0X7 151 aa9.12□□□□□ -0.95
RPS28-204ENST00000602140 ODF3Q96PU9 254 aa9.12□□□□□ -0.95
RPS28-204ENST00000602140 PFDN5Q99471 154 aa9.12□□□□□ -0.95
RPS28-204ENST00000602140 PYGO2Q9BRQ0 406 aa9.12□□□□□ -0.95
RPS28-204ENST00000602140 UQCC1Q9NVA1 299 aa9.12□□□□□ -0.95
RPS28-204ENST00000602140 ZNF586Q9NXT0 402 aa9.12□□□□□ -0.95
RPS28-204ENST00000602140 WDR83OSQ9Y284 106 aa9.12□□□□□ -0.95
RPS28-204ENST00000602140 TRAV6A0A075B6T7 132 aa9.11□□□□□ -0.95
RPS28-204ENST00000602140 DAZ2Q13117 558 aaKnown RBP9.11□□□□□ -0.95
RPS28-204ENST00000602140 Q6ZTI0 123 aa9.11□□□□□ -0.95
RPS28-204ENST00000602140 MAPKAPK5-AS1Q8N8E1 139 aa9.11□□□□□ -0.95
RPS28-204ENST00000602140 UPK3BQ9BT76 320 aa9.11□□□□□ -0.95
RPS28-204ENST00000602140 Q9H3A6 140 aa9.11□□□□□ -0.95
RPS28-204ENST00000602140 TMPRSS5Q9H3S3 457 aa9.11□□□□□ -0.95
RPS28-204ENST00000602140 C11orf1Q9H5F2 150 aa9.11□□□□□ -0.95
RPS28-204ENST00000602140 UBE2L5PA0A1B0GUS4 154 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 H3BNG1 76 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 M0R3E3 92 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 LYRM1O43325 122 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 ZNF253O75346 499 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 TCRBP04435 133 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 PVALBP20472 110 aaPredicted RBP9.1□□□□□ -0.95
RPS28-204ENST00000602140 RPL29P47914 159 aaKnown RBP9.1□□□□□ -0.95
RPS28-204ENST00000602140 BAXQ07812 192 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 ERCC8Q13216 396 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 VWC2Q2TAL6 325 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 SPATA12Q7Z6I5 190 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 C2orf50Q96LR7 162 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 SEC22CQ9BRL7 303 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 SLC39A9Q9NUM3 307 aa9.1□□□□□ -0.95
RPS28-204ENST00000602140 MRPS16Q9Y3D3 137 aaKnown RBP9.1□□□□□ -0.95
RPS28-204ENST00000602140 TRBV19A0A075B6N1 114 aa9.09□□□□□ -0.95
RPS28-204ENST00000602140 C7orf71A4D174 169 aa9.09□□□□□ -0.95
RPS28-204ENST00000602140 SLC25A5P05141 298 aaKnown RBP9.09□□□□□ -0.95
RPS28-204ENST00000602140 S100A11P31949 105 aa9.09□□□□□ -0.95
RPS28-204ENST00000602140 S100A10P60903 97 aa9.09□□□□□ -0.95
RPS28-204ENST00000602140 C12orf45Q8N5I9 185 aaPredicted RBP9.09□□□□□ -0.95
RPS28-204ENST00000602140 MRPL53Q96EL3 112 aaKnown RBP9.09□□□□□ -0.95
RPS28-204ENST00000602140 GSN-AS1Q9NRJ2 163 aa9.09□□□□□ -0.95
RPS28-204ENST00000602140 TRGV2A0A075B6R0 118 aa9.08□□□□□ -0.96
RPS28-204ENST00000602140 A0A096LPF7 62 aa9.08□□□□□ -0.96
RPS28-204ENST00000602140 A0A1W2PPQ1 181 aa9.08□□□□□ -0.96
RPS28-204ENST00000602140 IGSF23A1L1A6 192 aa9.08□□□□□ -0.96
RPS28-204ENST00000602140 NDUFB4O95168 129 aa9.08□□□□□ -0.96
RPS28-204ENST00000602140 SULT1A1P50225 295 aa9.08□□□□□ -0.96
RPS28-204ENST00000602140 CD300CQ08708 224 aa9.08□□□□□ -0.96
RPS28-204ENST00000602140 BTN1A1Q13410 526 aa9.08□□□□□ -0.96
RPS28-204ENST00000602140 TMEM252Q8N6L7 170 aa9.08□□□□□ -0.96
RPS28-204ENST00000602140 C11orf72Q8NBR9 251 aa9.08□□□□□ -0.96
RPS28-204ENST00000602140 ZNF680Q8NEM1 530 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms