RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 LINC00588Q9Y4M8 146 aa11.87□□□□□ -0.51
SCAF1-204ENST00000601038 PKHD1P08F94 4074 aa11.86□□□□□ -0.51
SCAF1-204ENST00000601038 FAM25EA8MYX2 175 aa11.86□□□□□ -0.51
SCAF1-204ENST00000601038 CST7O76096 145 aa11.86□□□□□ -0.51
SCAF1-204ENST00000601038 CAV2P51636 162 aa11.86□□□□□ -0.51
SCAF1-204ENST00000601038 GFI1BQ5VTD9 330 aa11.86□□□□□ -0.51
SCAF1-204ENST00000601038 MIC13Q5XKP0 118 aa11.86□□□□□ -0.51
SCAF1-204ENST00000601038 C6orf223Q8N319 242 aa11.86□□□□□ -0.51
SCAF1-204ENST00000601038 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
SCAF1-204ENST00000601038 ZNF431Q8TF32 576 aaPredicted RBP11.86□□□□□ -0.51
SCAF1-204ENST00000601038 ODF3Q96PU9 254 aa11.86□□□□□ -0.51
SCAF1-204ENST00000601038 C11orf1Q9H5F2 150 aa11.86□□□□□ -0.51
SCAF1-204ENST00000601038 WDR83OSQ9Y284 106 aa11.86□□□□□ -0.51
SCAF1-204ENST00000601038 C5orf51A6NDU8 294 aa11.85□□□□□ -0.51
SCAF1-204ENST00000601038 FAM24AA6NFZ4 105 aa11.85□□□□□ -0.51
SCAF1-204ENST00000601038 TNP2Q05952 138 aa11.85□□□□□ -0.51
SCAF1-204ENST00000601038 CLINT1Q14677 625 aa11.85□□□□□ -0.51
SCAF1-204ENST00000601038 VWC2Q2TAL6 325 aa11.85□□□□□ -0.51
SCAF1-204ENST00000601038 C2orf50Q96LR7 162 aa11.85□□□□□ -0.51
SCAF1-204ENST00000601038 PFDN5Q99471 154 aa11.85□□□□□ -0.51
SCAF1-204ENST00000601038 UQCC1Q9NVA1 299 aa11.85□□□□□ -0.51
SCAF1-204ENST00000601038 TRAV6A0A075B6T7 132 aa11.84□□□□□ -0.51
SCAF1-204ENST00000601038 TRAV5A0A0B4J249 113 aa11.84□□□□□ -0.51
SCAF1-204ENST00000601038 CT45A10P0DMU9 189 aa11.84□□□□□ -0.51
SCAF1-204ENST00000601038 PVALBP20472 110 aaPredicted RBP11.84□□□□□ -0.51
SCAF1-204ENST00000601038 LEPP41159 167 aa11.84□□□□□ -0.51
SCAF1-204ENST00000601038 RPL29P47914 159 aaKnown RBP11.84□□□□□ -0.51
SCAF1-204ENST00000601038 OR5I1Q13606 314 aa11.84□□□□□ -0.51
SCAF1-204ENST00000601038 SSX7Q7RTT5 188 aa11.84□□□□□ -0.51
SCAF1-204ENST00000601038 GNPNAT1Q96EK6 184 aaPredicted RBP11.84□□□□□ -0.51
SCAF1-204ENST00000601038 ZNF503Q96F45 646 aa11.84□□□□□ -0.51
SCAF1-204ENST00000601038 SEC22CQ9BRL7 303 aa11.84□□□□□ -0.51
SCAF1-204ENST00000601038 NUDT15Q9NV35 164 aa11.84□□□□□ -0.51
SCAF1-204ENST00000601038 SNURFLB1AK76 121 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 NPIPB6E9PJ23 425 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 ZNF253O75346 499 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 RLN2P04090 185 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 M6PRP20645 277 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 S100A11P31949 105 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 C12orf45Q8N5I9 185 aaPredicted RBP11.83□□□□□ -0.52
SCAF1-204ENST00000601038 RXFP4Q8TDU9 374 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 CHAC2Q8WUX2 184 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 PYGO2Q9BRQ0 406 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 Q9H8V8 135 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 SLC39A9Q9NUM3 307 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 ZNF586Q9NXT0 402 aa11.83□□□□□ -0.52
SCAF1-204ENST00000601038 TRAV26-1A0A087WT03 109 aa11.82□□□□□ -0.52
SCAF1-204ENST00000601038 TRAV12-3A0A0B4J271 114 aa11.82□□□□□ -0.52
SCAF1-204ENST00000601038 GAGE12BA1L429 117 aa11.82□□□□□ -0.52
SCAF1-204ENST00000601038 J3KRW8 73 aa11.82□□□□□ -0.52
SCAF1-204ENST00000601038 GAGE7O76087 117 aa11.82□□□□□ -0.52
SCAF1-204ENST00000601038 GAGE12FP0CL80 117 aa11.82□□□□□ -0.52
SCAF1-204ENST00000601038 GAGE12GP0CL81 117 aa11.82□□□□□ -0.52
SCAF1-204ENST00000601038 GAGE12IP0CL82 117 aa11.82□□□□□ -0.52
SCAF1-204ENST00000601038 SULT1A1P50225 295 aa11.82□□□□□ -0.52
SCAF1-204ENST00000601038 IL15RAQ13261 267 aa11.82□□□□□ -0.52
SCAF1-204ENST00000601038 TMEM252Q8N6L7 170 aa11.82□□□□□ -0.52
SCAF1-204ENST00000601038 MRPL53Q96EL3 112 aaKnown RBP11.82□□□□□ -0.52
SCAF1-204ENST00000601038 LYRM2Q9NU23 88 aaPredicted RBP11.82□□□□□ -0.52
SCAF1-204ENST00000601038 TRBV19A0A075B6N1 114 aa11.81□□□□□ -0.52
SCAF1-204ENST00000601038 H3BNG1 76 aa11.81□□□□□ -0.52
SCAF1-204ENST00000601038 HBG1P69891 147 aa11.81□□□□□ -0.52
SCAF1-204ENST00000601038 HBG2P69892 147 aa11.81□□□□□ -0.52
SCAF1-204ENST00000601038 BAXQ07812 192 aa11.81□□□□□ -0.52
SCAF1-204ENST00000601038 DAZ2Q13117 558 aaKnown RBP11.81□□□□□ -0.52
SCAF1-204ENST00000601038 TMEM14CQ9P0S9 112 aa11.81□□□□□ -0.52
SCAF1-204ENST00000601038 A0A0J9YY99 117 aa11.8□□□□□ -0.52
SCAF1-204ENST00000601038 UBE2L5PA0A1B0GUS4 154 aa11.8□□□□□ -0.52
SCAF1-204ENST00000601038 IGSF23A1L1A6 192 aa11.8□□□□□ -0.52
SCAF1-204ENST00000601038 C16orf90A8MZG2 172 aa11.8□□□□□ -0.52
SCAF1-204ENST00000601038 H2AFB2P0C5Z0 115 aa11.8□□□□□ -0.52
SCAF1-204ENST00000601038 HOXA5P20719 270 aa11.8□□□□□ -0.52
SCAF1-204ENST00000601038 S100A10P60903 97 aa11.8□□□□□ -0.52
SCAF1-204ENST00000601038 STX12Q86Y82 276 aa11.8□□□□□ -0.52
SCAF1-204ENST00000601038 PKD1P98161 4303 aa11.79□□□□□ -0.52
SCAF1-204ENST00000601038 SLC25A5P05141 298 aaKnown RBP11.79□□□□□ -0.52
SCAF1-204ENST00000601038 HIST1H1EP10412 219 aaKnown RBP11.79□□□□□ -0.52
SCAF1-204ENST00000601038 RAB32Q13637 225 aa11.79□□□□□ -0.52
SCAF1-204ENST00000601038 ATP6V1FQ16864 119 aa11.79□□□□□ -0.52
SCAF1-204ENST00000601038 NDUFA13Q9P0J0 144 aa11.79□□□□□ -0.52
SCAF1-204ENST00000601038 PRELID1Q9Y255 219 aa11.79□□□□□ -0.52
SCAF1-204ENST00000601038 DNAH11Q96DT5 4516 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 C7orf71A4D174 169 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 M0R3E3 92 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 MPDU1O75352 247 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 NDUFB4O95168 129 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 FGF7P21781 194 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 PDE6HQ13956 83 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 ESRGQ1W209 222 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 TTC32Q5I0X7 151 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 Q6ZTI0 123 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 LINC00477Q96M19 166 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 UPK3BQ9BT76 320 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 CCDC32Q9BV29 185 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 TIMM9Q9Y5J7 89 aa11.78□□□□□ -0.52
SCAF1-204ENST00000601038 DYNC1H1Q14204 4646 aaKnown RBP11.77□□□□□ -0.52
SCAF1-204ENST00000601038 KLLNB2CW77 178 aa11.77□□□□□ -0.53
SCAF1-204ENST00000601038 ZNF324O75467 553 aaPredicted RBP11.77□□□□□ -0.53
SCAF1-204ENST00000601038 ERCC8Q13216 396 aa11.77□□□□□ -0.53
SCAF1-204ENST00000601038 ZNF680Q8NEM1 530 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms