RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 SAV1Q9H4B6 383 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-222ENST00000600320 TUBA4BQ9H853 241 aa14.77□□□□□ -0.05
SHKBP1-222ENST00000600320 FRMD6-AS1P0C7T7 363 aa14.76□□□□□ -0.05
SHKBP1-222ENST00000600320 ZNF705DP0CH99 300 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-222ENST00000600320 ZNF705BP0CI00 300 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-222ENST00000600320 RPL35AP18077 110 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-222ENST00000600320 CCL20P78556 96 aa14.76□□□□□ -0.05
SHKBP1-222ENST00000600320 TEX261Q6UWH6 196 aa14.76□□□□□ -0.05
SHKBP1-222ENST00000600320 FOXI2Q6ZQN5 318 aa14.76□□□□□ -0.05
SHKBP1-222ENST00000600320 AAMDCQ9H7C9 122 aa14.76□□□□□ -0.05
SHKBP1-222ENST00000600320 CLEC5AQ9NY25 188 aa14.76□□□□□ -0.05
SHKBP1-222ENST00000600320 A0A0J9YX75 114 aa14.75□□□□□ -0.05
SHKBP1-222ENST00000600320 H3BMM0 161 aa14.75□□□□□ -0.05
SHKBP1-222ENST00000600320 HLA-DRB4P13762 266 aa14.75□□□□□ -0.05
SHKBP1-222ENST00000600320 TRPT1Q86TN4 253 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-222ENST00000600320 LYPD1Q8N2G4 141 aa14.75□□□□□ -0.05
SHKBP1-222ENST00000600320 MRPL53Q96EL3 112 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-222ENST00000600320 OTORQ9NRC9 128 aa14.75□□□□□ -0.05
SHKBP1-222ENST00000600320 PRELID1Q9Y255 219 aa14.75□□□□□ -0.05
SHKBP1-222ENST00000600320 YTHDF2Q9Y5A9 579 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-222ENST00000600320 HLA-DRB4X5D2U9 266 aa14.75□□□□□ -0.05
SHKBP1-222ENST00000600320 TRAV1-1A0A0B4J248 108 aa14.74□□□□□ -0.05
SHKBP1-222ENST00000600320 PGPA6NDG6 321 aa14.74□□□□□ -0.05
SHKBP1-222ENST00000600320 UBE2G2P60604 165 aa14.74□□□□□ -0.05
SHKBP1-222ENST00000600320 ZNF680Q8NEM1 530 aa14.74□□□□□ -0.05
SHKBP1-222ENST00000600320 OR8A1Q8NGG7 326 aa14.74□□□□□ -0.05
SHKBP1-222ENST00000600320 LOC102724200A0A096LPH7 203 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-222ENST00000600320 GGTLC3B5MD39 225 aa14.73□□□□□ -0.05
SHKBP1-222ENST00000600320 EBLN2Q6P2I7 272 aa14.73□□□□□ -0.05
SHKBP1-222ENST00000600320 STHQ8IWL8 128 aa14.73□□□□□ -0.05
SHKBP1-222ENST00000600320 IGKV3-20P01619 116 aa14.72□□□□□ -0.05
SHKBP1-222ENST00000600320 CNN1P51911 297 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-222ENST00000600320 HIST1H1AQ02539 215 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-222ENST00000600320 A0A1W2PRE2 83 aa14.71□□□□□ -0.05
SHKBP1-222ENST00000600320 FAM74A7A6NL05 159 aa14.71□□□□□ -0.05
SHKBP1-222ENST00000600320 HBE1P02100 147 aa14.71□□□□□ -0.05
SHKBP1-222ENST00000600320 GNG5P63218 68 aa14.71□□□□□ -0.05
SHKBP1-222ENST00000600320 OR4B1Q8NGF8 309 aa14.71□□□□□ -0.05
SHKBP1-222ENST00000600320 PCNPQ8WW12 178 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-222ENST00000600320 IGKV2-40A0A087WW87 121 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-222ENST00000600320 A8MTW9 85 aa14.7□□□□□ -0.06
SHKBP1-222ENST00000600320 PAGE4O60829 102 aa14.7□□□□□ -0.06
SHKBP1-222ENST00000600320 IGKV2D-40P01614 121 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-222ENST00000600320 SUMO1P63165 101 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-222ENST00000600320 BLOC1S1P78537 153 aa14.7□□□□□ -0.06
SHKBP1-222ENST00000600320 RPH3ALQ9UNE2 315 aa14.7□□□□□ -0.06
SHKBP1-222ENST00000600320 DIRC3C9JPN6 131 aa14.69□□□□□ -0.06
SHKBP1-222ENST00000600320 DUSP14O95147 198 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-222ENST00000600320 SLC25A5P05141 298 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-222ENST00000600320 IFITM2Q01629 132 aa14.69□□□□□ -0.06
SHKBP1-222ENST00000600320 ERCC8Q13216 396 aa14.69□□□□□ -0.06
SHKBP1-222ENST00000600320 AMTNQ6UX39 209 aa14.69□□□□□ -0.06
SHKBP1-222ENST00000600320 ASCL2Q99929 193 aa14.69□□□□□ -0.06
SHKBP1-222ENST00000600320 IFNA7P01567 189 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 GIG44P09565 113 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 CSN1S1P47710 185 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 ATP5G3P48201 142 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 FXYD7P58549 80 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 HAGHQ16775 308 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 SBSPONQ8IVN8 264 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 OR10J6PQ8NGY7 276 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 CMTM2Q8TAZ6 248 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 RXFP4Q8TDU9 374 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 CLUHP3Q96NS8 147 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 VGLL1Q99990 258 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 GNG13Q9P2W3 67 aa14.68□□□□□ -0.06
SHKBP1-222ENST00000600320 NPIPB6E9PJ23 425 aa14.67□□□□□ -0.06
SHKBP1-222ENST00000600320 TEX46H3BTG2 121 aa14.67□□□□□ -0.06
SHKBP1-222ENST00000600320 CST9LP1Q5W188 147 aa14.67□□□□□ -0.06
SHKBP1-222ENST00000600320 C5orf17Q8NAS9 161 aa14.67□□□□□ -0.06
SHKBP1-222ENST00000600320 LYPD6BQ8NI32 183 aa14.67□□□□□ -0.06
SHKBP1-222ENST00000600320 SLC35B3Q9H1N7 401 aa14.67□□□□□ -0.06
SHKBP1-222ENST00000600320 ARL2-SNX15V9GYD0 113 aa14.67□□□□□ -0.06
SHKBP1-222ENST00000600320 GOLT1AQ6ZVE7 132 aa14.66□□□□□ -0.06
SHKBP1-222ENST00000600320 CCDC28AQ8IWP9 274 aa14.66□□□□□ -0.06
SHKBP1-222ENST00000600320 AGPAT4-IT1Q9H0P7 198 aa14.66□□□□□ -0.06
SHKBP1-222ENST00000600320 CSTL1Q9H114 145 aa14.66□□□□□ -0.06
SHKBP1-222ENST00000600320 EPDR1Q9UM22 224 aa14.66□□□□□ -0.06
SHKBP1-222ENST00000600320 KIR2DL5BA0A0G2JN68 375 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 KIR2DL5BA0A0G2JPC4 375 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 TCRAP04437 139 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 CT45A10P0DMU9 189 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 PPT1P50897 306 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 APOC4P55056 127 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 MORN3Q6PF18 240 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 C9orf47Q6ZRZ4 202 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 KIR2DL5AQ8N109 375 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 ARL6IP6Q8N6S5 226 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 KIR2DL5BQ8NHK3 375 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 B9D2Q9BPU9 175 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 TGP01266 2768 aa14.65□□□□□ -0.06
SHKBP1-222ENST00000600320 CA1P00915 261 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-222ENST00000600320 NMBP08949 121 aa14.64□□□□□ -0.07
SHKBP1-222ENST00000600320 MANBALQ9NQG1 85 aa14.64□□□□□ -0.07
SHKBP1-222ENST00000600320 RBAKDNA6NC62 111 aa14.63□□□□□ -0.07
SHKBP1-222ENST00000600320 PMS2P11Q13670 270 aa14.63□□□□□ -0.07
SHKBP1-222ENST00000600320 SGK494Q96LW2 274 aa14.63□□□□□ -0.07
SHKBP1-222ENST00000600320 NKX6-2Q9C056 277 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-222ENST00000600320 TRAV8-1A0A0A6YYK1 113 aa14.62□□□□□ -0.07
SHKBP1-222ENST00000600320 M0R2Z0 102 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms