RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 ARHGAP21Q5T5U3 1957 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 LTBP1Q14766 1721 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 TRPM3Q9HCF6 1732 aaPredicted RBP3.56□□□□□ -1.84
PAF1-208ENST00000598594 TOPAZ1Q8N9V7 1692 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 IGLV3-9A0A075B6K5 115 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 IGHV3-64DA0A0J9YX35 117 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 GRIFINA4D1Z8 144 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 PINLYPA6NC86 204 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 COLCA2A8K830 154 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 SDCBPO00560 298 aaPredicted RBP3.56□□□□□ -1.84
PAF1-208ENST00000598594 HYPMO75409 117 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 GYPBP06028 91 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 ZNF705BP0CI00 300 aaPredicted RBP3.56□□□□□ -1.84
PAF1-208ENST00000598594 CCL4P13236 92 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 SUPT4H1P63272 117 aaKnown RBP3.56□□□□□ -1.84
PAF1-208ENST00000598594 DPTQ07507 201 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 Q0VG73 95 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 UNQ5815/PRO19632Q6UWF5 114 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 SDIM1Q6ZPB5 146 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 MIR7-3HGQ8N6C7 128 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 C10orf105Q8TEF2 133 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 CLEC2BQ92478 149 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 MRPS24Q96EL2 167 aaKnown RBP3.56□□□□□ -1.84
PAF1-208ENST00000598594 DSCR8Q96T75 97 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 TMEM14AQ9Y6G1 99 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 U3KQK5 164 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 PTPRFP10586 1907 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 PTPRDP23468 1912 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 TRPM7Q96QT4 1865 aa3.56□□□□□ -1.84
PAF1-208ENST00000598594 PXDNLA1KZ92 1463 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 LOC107986453A0A1B0GWG9 222 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 ZNF736B4DX44 427 aaPredicted RBP3.55□□□□□ -1.84
PAF1-208ENST00000598594 TIMM17BO60830 172 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 ZNF737O75373 536 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 SNCGO76070 127 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 NDUFB6O95139 128 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 APOC3P02656 99 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 SHBGP04278 402 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 CRIP2P52943 208 aaPredicted RBP3.55□□□□□ -1.84
PAF1-208ENST00000598594 C9orf129Q5T035 196 aaKnown RBP3.55□□□□□ -1.84
PAF1-208ENST00000598594 Q6ZTC4 211 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 C2orf91Q6ZV80 131 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 CHCHD1Q96BP2 118 aaKnown RBP3.55□□□□□ -1.84
PAF1-208ENST00000598594 S100A13Q99584 98 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 REG4Q9BYZ8 158 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 LINC00574Q9H8X3 128 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 TRAPPC1Q9Y5R8 145 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 MARF1Q9Y4F3 1742 aaKnown RBP3.55□□□□□ -1.84
PAF1-208ENST00000598594 AGRNO00468 2067 aa3.55□□□□□ -1.84
PAF1-208ENST00000598594 LCTP09848 1927 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 PLXNA2O75051 1894 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.54□□□□□ -1.84
PAF1-208ENST00000598594 IGHV3-73A0A0B4J1V6 119 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 A0A0B4J2C4 111 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 H7C423 109 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 K7EP34 96 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 SLPIP03973 132 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 MSMBP08118 114 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 SAA1P0DJI8 122 aaPredicted RBP3.54□□□□□ -1.84
PAF1-208ENST00000598594 CKS2P33552 79 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 RPL28P46779 137 aaKnown RBP3.54□□□□□ -1.84
PAF1-208ENST00000598594 IL17AQ16552 155 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 ALKAL2Q6UX46 152 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 DPPA3Q6W0C5 159 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 FP248Q71RG6 208 aaPredicted RBP3.54□□□□□ -1.84
PAF1-208ENST00000598594 POM121L12Q8N7R1 296 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 C10orf82Q8WW14 230 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 AQP3Q92482 292 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 LINC00479Q96M42 142 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 IMMP2LQ96T52 175 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 TPRKBQ9Y3C4 175 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 USP54Q70EL1 1684 aa3.54□□□□□ -1.84
PAF1-208ENST00000598594 MYO18AQ92614 2054 aaKnown RBP3.54□□□□□ -1.84
PAF1-208ENST00000598594 SCAF11Q99590 1463 aaKnown RBP3.54□□□□□ -1.84
PAF1-208ENST00000598594 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.53□□□□□ -1.84
PAF1-208ENST00000598594 RBAKDNA6NC62 111 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 CREBL2O60519 120 aaPredicted RBP3.53□□□□□ -1.84
PAF1-208ENST00000598594 SNCAP37840 140 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 SPRNQ5BIV9 151 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 Q5BKY6 102 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.53□□□□□ -1.84
PAF1-208ENST00000598594 OR2T35Q8NGX2 323 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 ATP6V0E2Q8NHE4 81 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 CCL4L1Q8NHW4 92 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 FGF13Q92913 245 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 RETNLBQ9BQ08 111 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 SMDT1Q9H4I9 107 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 ZNF355PQ9NSJ1 428 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 ASF1BQ9NVP2 202 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 FANCAO15360 1455 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 SCN3AQ9NY46 2000 aa3.53□□□□□ -1.84
PAF1-208ENST00000598594 KNDC1Q76NI1 1749 aa3.53□□□□□ -1.85
PAF1-208ENST00000598594 THADAQ6YHU6 1953 aa3.52□□□□□ -1.85
PAF1-208ENST00000598594 KIAA1549Q9HCM3 1950 aa3.52□□□□□ -1.85
PAF1-208ENST00000598594 PPRC1Q5VV67 1664 aaKnown RBP3.52□□□□□ -1.85
PAF1-208ENST00000598594 DOCK2Q92608 1830 aa3.52□□□□□ -1.85
PAF1-208ENST00000598594 IGKV1OR2-108A0A075B7D4 117 aa3.52□□□□□ -1.85
PAF1-208ENST00000598594 NMBP08949 121 aa3.52□□□□□ -1.85
PAF1-208ENST00000598594 COX7CP15954 63 aa3.52□□□□□ -1.85
PAF1-208ENST00000598594 PEBP1P30086 187 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms