RNA–Protein interactions for RNA: ENST00000598474.3

SOX2-OT-229, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 515 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-229ENST00000598474 PHYHIPLQ96FC7 376 aa9.83□□□□□ -0.84
SOX2-OT-229ENST00000598474 C11orf68Q9H3H3 251 aaKnown RBP9.83□□□□□ -0.84
SOX2-OT-229ENST00000598474 CYTL1Q9NRR1 136 aa9.83□□□□□ -0.84
SOX2-OT-229ENST00000598474 AGRNO00468 2067 aa9.83□□□□□ -0.84
SOX2-OT-229ENST00000598474 BORCS7-ASMTA0A0B4J1R7 106 aa9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 IGHV4-28A0A0C4DH34 117 aa9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 BOLA2-SMG1P6H3BVE0 249 aa9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 CRXO43186 299 aaPredicted RBP9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 RBMY1A1P0DJD3 496 aaKnown RBP9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 RBMY1CP0DJD4 496 aa9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 MIFP14174 115 aa9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 TAS2R45P59539 299 aa9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 UBE2L3P68036 154 aaKnown RBP9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 RBMY1FQ15415 496 aaKnown RBP9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 ZNF705AQ6ZN79 300 aaPredicted RBP9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 C1orf158Q8N1D5 194 aa9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 RPP25LQ8N5L8 163 aaKnown RBP9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 MRPL53Q96EL3 112 aaKnown RBP9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 ST6GAL2Q96JF0 529 aa9.82□□□□□ -0.84
SOX2-OT-229ENST00000598474 IGHV3OR16-12A0A075B7B8 117 aa9.81□□□□□ -0.84
SOX2-OT-229ENST00000598474 A0A1W2PPV4 95 aa9.81□□□□□ -0.84
SOX2-OT-229ENST00000598474 HMSDA8MTL9 139 aa9.81□□□□□ -0.84
SOX2-OT-229ENST00000598474 TAAR5O14804 337 aa9.81□□□□□ -0.84
SOX2-OT-229ENST00000598474 HMGB3O15347 200 aaKnown RBP9.81□□□□□ -0.84
SOX2-OT-229ENST00000598474 SERF2P84101 59 aa9.81□□□□□ -0.84
SOX2-OT-229ENST00000598474 ZNF345Q14585 488 aa9.81□□□□□ -0.84
SOX2-OT-229ENST00000598474 BAP18Q8IXM2 172 aa9.81□□□□□ -0.84
SOX2-OT-229ENST00000598474 KCNRGQ8N5I3 272 aa9.81□□□□□ -0.84
SOX2-OT-229ENST00000598474 OR10J6PQ8NGY7 276 aa9.81□□□□□ -0.84
SOX2-OT-229ENST00000598474 GNPNAT1Q96EK6 184 aaPredicted RBP9.81□□□□□ -0.84
SOX2-OT-229ENST00000598474 NPIPB6E9PJ23 425 aa9.8□□□□□ -0.84
SOX2-OT-229ENST00000598474 JTBO76095 146 aa9.8□□□□□ -0.84
SOX2-OT-229ENST00000598474 AMBPP02760 352 aa9.8□□□□□ -0.84
SOX2-OT-229ENST00000598474 CDC34P49427 236 aaPredicted RBP9.8□□□□□ -0.84
SOX2-OT-229ENST00000598474 ICAM4Q14773 271 aa9.8□□□□□ -0.84
SOX2-OT-229ENST00000598474 IGF2BP2-AS1Q96M15 143 aa9.8□□□□□ -0.84
SOX2-OT-229ENST00000598474 AAMDCQ9H7C9 122 aa9.8□□□□□ -0.84
SOX2-OT-229ENST00000598474 PRELID1Q9Y255 219 aa9.8□□□□□ -0.84
SOX2-OT-229ENST00000598474 hCG_2014768A0A024R1R8 64 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 TRAV12-2A0A075B6T6 113 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 MBP02144 154 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 RANP62826 216 aaKnown RBP9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 PQLC2Q6ZP29 291 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 SSX7Q7RTT5 188 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 RAB24Q969Q5 203 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 NEU1Q99519 415 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 ARPC5LQ9BPX5 153 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 Q9H3A6 140 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 PPP1R14DQ9NXH3 145 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 GOLT1BQ9Y3E0 138 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 CSMD3Q7Z407 3707 aa9.79□□□□□ -0.84
SOX2-OT-229ENST00000598474 IGKV2-40A0A087WW87 121 aaPredicted RBP9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 INSP01308 110 aa9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 IGKV2D-40P01614 121 aaPredicted RBP9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 STAG3L2P0CL84 134 aa9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 STAG3L3P0CL85 134 aa9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 ARL14EPLP0DKL9 152 aa9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 CT45A10P0DMU9 189 aa9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 ERCC8Q13216 396 aa9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 PMS2P11Q13670 270 aa9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 KIR3DS1Q14943 382 aa9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 TCTE3Q8IZS6 198 aa9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 LYPD1Q8N2G4 141 aa9.78□□□□□ -0.84
SOX2-OT-229ENST00000598474 A0A0D9SG52 128 aa9.77□□□□□ -0.85
SOX2-OT-229ENST00000598474 BCL2L11O43521 198 aa9.77□□□□□ -0.85
SOX2-OT-229ENST00000598474 CDKN1BP46527 198 aa9.77□□□□□ -0.85
SOX2-OT-229ENST00000598474 NANOS2P60321 138 aaKnown RBP9.77□□□□□ -0.85
SOX2-OT-229ENST00000598474 ZNF726P1Q15940 193 aa9.77□□□□□ -0.85
SOX2-OT-229ENST00000598474 AGPAT4-IT1Q9H0P7 198 aa9.77□□□□□ -0.85
SOX2-OT-229ENST00000598474 STARD9Q9P2P6 4700 aa9.76□□□□□ -0.85
SOX2-OT-229ENST00000598474 CXorf65A6NEN9 183 aa9.76□□□□□ -0.85
SOX2-OT-229ENST00000598474 SMIM9A6NGZ8 99 aa9.76□□□□□ -0.85
SOX2-OT-229ENST00000598474 PRM2P04554 102 aa9.76□□□□□ -0.85
SOX2-OT-229ENST00000598474 C11orf45Q8TAV5 145 aa9.76□□□□□ -0.85
SOX2-OT-229ENST00000598474 ODF3Q96PU9 254 aa9.76□□□□□ -0.85
SOX2-OT-229ENST00000598474 VGLL1Q99990 258 aa9.76□□□□□ -0.85
SOX2-OT-229ENST00000598474 ACTR3CQ9C0K3 210 aaPredicted RBP9.76□□□□□ -0.85
SOX2-OT-229ENST00000598474 CELA1Q9UNI1 258 aa9.76□□□□□ -0.85
SOX2-OT-229ENST00000598474 GCHFRP30047 84 aa9.75□□□□□ -0.85
SOX2-OT-229ENST00000598474 TSPOP30536 169 aa9.75□□□□□ -0.85
SOX2-OT-229ENST00000598474 GFI1BQ5VTD9 330 aa9.75□□□□□ -0.85
SOX2-OT-229ENST00000598474 C9orf47Q6ZRZ4 202 aa9.75□□□□□ -0.85
SOX2-OT-229ENST00000598474 SUN5Q8TC36 379 aa9.75□□□□□ -0.85
SOX2-OT-229ENST00000598474 FAM19A4Q96LR4 140 aa9.75□□□□□ -0.85
SOX2-OT-229ENST00000598474 TMEM208Q9BTX3 173 aa9.75□□□□□ -0.85
SOX2-OT-229ENST00000598474 ZNF471Q9BX82 626 aaPredicted RBP9.75□□□□□ -0.85
SOX2-OT-229ENST00000598474 OTORQ9NRC9 128 aa9.75□□□□□ -0.85
SOX2-OT-229ENST00000598474 LOC102723971A0A1B0GUV8 181 aa9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 A0A1B0GVG6 124 aa9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 KANTRA0A1W2PQU2 76 aa9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 PGPA6NDG6 321 aa9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 ZNF705GA8MUZ8 300 aaPredicted RBP9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 J3KRW8 73 aa9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 HBE1P02100 147 aa9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 LEPP41159 167 aa9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 CSN1S1P47710 185 aa9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 CD300CQ08708 224 aa9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 RRN3P1Q2M238 152 aa9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 AKR1C8PQ5T2L2 129 aa9.74□□□□□ -0.85
SOX2-OT-229ENST00000598474 TMUB2Q71RG4 321 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms