RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 FRMD6-AS1P0C7T7 363 aa6.9□□□□□ -1.3
ZNF548-206ENST00000597047 STAG3L2P0CL84 134 aa6.9□□□□□ -1.3
ZNF548-206ENST00000597047 STAG3L3P0CL85 134 aa6.9□□□□□ -1.3
ZNF548-206ENST00000597047 HIST1H1AQ02539 215 aaPredicted RBP6.9□□□□□ -1.3
ZNF548-206ENST00000597047 CLLU1Q5K131 121 aa6.9□□□□□ -1.3
ZNF548-206ENST00000597047 GDF5OSQ5U4N7 250 aa6.9□□□□□ -1.3
ZNF548-206ENST00000597047 SAMD13Q5VXD3 122 aa6.9□□□□□ -1.3
ZNF548-206ENST00000597047 PQLC2Q6ZP29 291 aa6.9□□□□□ -1.3
ZNF548-206ENST00000597047 RPUSD4Q96CM3 377 aaKnown RBP6.9□□□□□ -1.3
ZNF548-206ENST00000597047 SAT2Q96F10 170 aaPredicted RBP6.9□□□□□ -1.3
ZNF548-206ENST00000597047 SLC50A1Q9BRV3 221 aa6.9□□□□□ -1.3
ZNF548-206ENST00000597047 ZNF331Q9NQX6 463 aaPredicted RBP6.9□□□□□ -1.3
ZNF548-206ENST00000597047 C19orf73Q9NVV2 129 aa6.9□□□□□ -1.3
ZNF548-206ENST00000597047 RBMY1BA6NDE4 496 aaKnown RBP6.89□□□□□ -1.31
ZNF548-206ENST00000597047 RBMY1EA6NEQ0 496 aaKnown RBP6.89□□□□□ -1.31
ZNF548-206ENST00000597047 PRAC2D3DTV9 90 aa6.89□□□□□ -1.31
ZNF548-206ENST00000597047 M0R3E3 92 aa6.89□□□□□ -1.31
ZNF548-206ENST00000597047 NDUFB4O95168 129 aa6.89□□□□□ -1.31
ZNF548-206ENST00000597047 RBMY1DP0C7P1 496 aaKnown RBP6.89□□□□□ -1.31
ZNF548-206ENST00000597047 CMTM2Q8TAZ6 248 aa6.89□□□□□ -1.31
ZNF548-206ENST00000597047 Q9H3A6 140 aa6.89□□□□□ -1.31
ZNF548-206ENST00000597047 AGRNO00468 2067 aa6.89□□□□□ -1.31
ZNF548-206ENST00000597047 J3KRW8 73 aa6.88□□□□□ -1.31
ZNF548-206ENST00000597047 HBE1P02100 147 aa6.88□□□□□ -1.31
ZNF548-206ENST00000597047 SLC25A5P05141 298 aaKnown RBP6.88□□□□□ -1.31
ZNF548-206ENST00000597047 CSN1S1P47710 185 aa6.88□□□□□ -1.31
ZNF548-206ENST00000597047 ERCC8Q13216 396 aa6.88□□□□□ -1.31
ZNF548-206ENST00000597047 CST9LP1Q5W188 147 aa6.88□□□□□ -1.31
ZNF548-206ENST00000597047 OR10J6PQ8NGY7 276 aa6.88□□□□□ -1.31
ZNF548-206ENST00000597047 SAV1Q9H4B6 383 aaPredicted RBP6.88□□□□□ -1.31
ZNF548-206ENST00000597047 TMEM167BQ9NRX6 74 aa6.88□□□□□ -1.31
ZNF548-206ENST00000597047 IGKV2-40A0A087WW87 121 aaPredicted RBP6.87□□□□□ -1.31
ZNF548-206ENST00000597047 CA1P00915 261 aaPredicted RBP6.87□□□□□ -1.31
ZNF548-206ENST00000597047 IGKV2D-40P01614 121 aaPredicted RBP6.87□□□□□ -1.31
ZNF548-206ENST00000597047 SUMO1P63165 101 aaKnown RBP6.87□□□□□ -1.31
ZNF548-206ENST00000597047 GNG5P63218 68 aa6.87□□□□□ -1.31
ZNF548-206ENST00000597047 CCL20P78556 96 aa6.87□□□□□ -1.31
ZNF548-206ENST00000597047 PDE6HQ13956 83 aa6.87□□□□□ -1.31
ZNF548-206ENST00000597047 FOXI2Q6ZQN5 318 aa6.87□□□□□ -1.31
ZNF548-206ENST00000597047 SBSPONQ8IVN8 264 aa6.87□□□□□ -1.31
ZNF548-206ENST00000597047 MBD3L1Q8WWY6 194 aa6.87□□□□□ -1.31
ZNF548-206ENST00000597047 CLEC5AQ9NY25 188 aa6.87□□□□□ -1.31
ZNF548-206ENST00000597047 GNG13Q9P2W3 67 aa6.87□□□□□ -1.31
ZNF548-206ENST00000597047 A0A0J9YX75 114 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 H3BMM0 161 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 PAGE4O60829 102 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 DUSP14O95147 198 aaKnown RBP6.86□□□□□ -1.31
ZNF548-206ENST00000597047 CNN1P51911 297 aaKnown RBP6.86□□□□□ -1.31
ZNF548-206ENST00000597047 APOC4P55056 127 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 HAGHQ16775 308 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 COMMD7Q86VX2 200 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 OR8A1Q8NGG7 326 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 SGK494Q96LW2 274 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 FAM110AQ9BQ89 295 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 CSTL1Q9H114 145 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 SLC35B3Q9H1N7 401 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 RETNQ9HD89 108 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 OTORQ9NRC9 128 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 XCL2Q9UBD3 114 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 PRELID1Q9Y255 219 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 MEGF8Q7Z7M0 2845 aa6.86□□□□□ -1.31
ZNF548-206ENST00000597047 IGHV3OR16-12A0A075B7B8 117 aa6.85□□□□□ -1.31
ZNF548-206ENST00000597047 LINC00862A6NCI5 91 aa6.85□□□□□ -1.31
ZNF548-206ENST00000597047 ZNF253O75346 499 aa6.85□□□□□ -1.31
ZNF548-206ENST00000597047 HLA-DRB4P13762 266 aa6.85□□□□□ -1.31
ZNF548-206ENST00000597047 SPINK13Q1W4C9 94 aa6.85□□□□□ -1.31
ZNF548-206ENST00000597047 TMEM78Q5T7P6 136 aa6.85□□□□□ -1.31
ZNF548-206ENST00000597047 GOLT1AQ6ZVE7 132 aa6.85□□□□□ -1.31
ZNF548-206ENST00000597047 TRPT1Q86TN4 253 aaKnown RBP6.85□□□□□ -1.31
ZNF548-206ENST00000597047 SLC7A5P1Q8MH63 180 aa6.85□□□□□ -1.31
ZNF548-206ENST00000597047 LYPD1Q8N2G4 141 aa6.85□□□□□ -1.31
ZNF548-206ENST00000597047 VGLL1Q99990 258 aa6.85□□□□□ -1.31
ZNF548-206ENST00000597047 YTHDF2Q9Y5A9 579 aaKnown RBP6.85□□□□□ -1.31
ZNF548-206ENST00000597047 HLA-DRB4X5D2U9 266 aa6.85□□□□□ -1.31
ZNF548-206ENST00000597047 TRAV12-2A0A075B6T6 113 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 TRAV1-1A0A0B4J248 108 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 FAM74A7A6NL05 159 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 M0R2Z0 102 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 IFNA1P01562 189 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 ATP5G3P48201 142 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 NUTF2P61970 127 aaKnown RBP6.84□□□□□ -1.31
ZNF548-206ENST00000597047 DEFB135Q30KP9 77 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 TOR2AQ5JU69 321 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 LYPD6BQ8NI32 183 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 RXFP4Q8TDU9 374 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 B9D2Q9BPU9 175 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 EIF5A2Q9GZV4 153 aaKnown RBP6.84□□□□□ -1.31
ZNF548-206ENST00000597047 ZMAT4Q9H898 229 aa6.84□□□□□ -1.31
ZNF548-206ENST00000597047 A8MZ25 164 aa6.83□□□□□ -1.32
ZNF548-206ENST00000597047 GGTLC3B5MD39 225 aa6.83□□□□□ -1.32
ZNF548-206ENST00000597047 DIRC3C9JPN6 131 aa6.83□□□□□ -1.32
ZNF548-206ENST00000597047 HTN1P15515 57 aa6.83□□□□□ -1.32
ZNF548-206ENST00000597047 NDUFA5Q16718 116 aa6.83□□□□□ -1.32
ZNF548-206ENST00000597047 MORN3Q6PF18 240 aaPredicted RBP6.83□□□□□ -1.32
ZNF548-206ENST00000597047 Q8TAT8 98 aa6.83□□□□□ -1.32
ZNF548-206ENST00000597047 MRPL53Q96EL3 112 aaKnown RBP6.83□□□□□ -1.32
ZNF548-206ENST00000597047 RARRES2Q99969 163 aa6.83□□□□□ -1.32
ZNF548-206ENST00000597047 TMEM208Q9BTX3 173 aa6.83□□□□□ -1.32
ZNF548-206ENST00000597047 AGPAT4-IT1Q9H0P7 198 aa6.83□□□□□ -1.32
ZNF548-206ENST00000597047 TREM1Q9NP99 234 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms