RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 TMEM88Q6PEY1 159 aa14.32□□□□□ -0.12
PNKP-207ENST00000596014 BPIFA4PQ86YQ2 179 aa14.32□□□□□ -0.12
PNKP-207ENST00000596014 CYB561D1Q8N8Q1 229 aa14.32□□□□□ -0.12
PNKP-207ENST00000596014 AGRNO00468 2067 aa14.31□□□□□ -0.12
PNKP-207ENST00000596014 PMS2P11Q13670 270 aa14.31□□□□□ -0.12
PNKP-207ENST00000596014 SAMD13Q5VXD3 122 aa14.31□□□□□ -0.12
PNKP-207ENST00000596014 LINC00322Q6ZN03 302 aaPredicted RBP14.31□□□□□ -0.12
PNKP-207ENST00000596014 RAB24Q969Q5 203 aa14.31□□□□□ -0.12
PNKP-207ENST00000596014 HMGB3O15347 200 aaKnown RBP14.3□□□□□ -0.12
PNKP-207ENST00000596014 PSMG4Q5JS54 123 aa14.3□□□□□ -0.12
PNKP-207ENST00000596014 SPATA31B1PQ5VZV4 182 aa14.3□□□□□ -0.12
PNKP-207ENST00000596014 MANBALQ9NQG1 85 aa14.3□□□□□ -0.12
PNKP-207ENST00000596014 VAX2Q9UIW0 290 aa14.3□□□□□ -0.12
PNKP-207ENST00000596014 NBEAL2Q6ZNJ1 2754 aa14.3□□□□□ -0.12
PNKP-207ENST00000596014 A0A087X0K7 114 aa14.3□□□□□ -0.12
PNKP-207ENST00000596014 ISLRO14498 428 aa14.3□□□□□ -0.12
PNKP-207ENST00000596014 ID1P41134 155 aa14.3□□□□□ -0.12
PNKP-207ENST00000596014 PSMB3P49720 205 aa14.3□□□□□ -0.12
PNKP-207ENST00000596014 MIR17HGQ75NE6 70 aa14.3□□□□□ -0.12
PNKP-207ENST00000596014 C16orf92Q96LL3 132 aa14.3□□□□□ -0.12
PNKP-207ENST00000596014 M0R036 132 aa14.29□□□□□ -0.12
PNKP-207ENST00000596014 CEBPGP53567 150 aa14.29□□□□□ -0.12
PNKP-207ENST00000596014 RHEBQ15382 184 aa14.29□□□□□ -0.12
PNKP-207ENST00000596014 SBSPONQ8IVN8 264 aa14.29□□□□□ -0.12
PNKP-207ENST00000596014 ASCL2Q99929 193 aa14.29□□□□□ -0.12
PNKP-207ENST00000596014 MRPL32Q9BYC8 188 aaKnown RBP14.29□□□□□ -0.12
PNKP-207ENST00000596014 FUT9Q9Y231 359 aa14.29□□□□□ -0.12
PNKP-207ENST00000596014 LOC102724200A0A096LPH7 203 aaPredicted RBP14.28□□□□□ -0.12
PNKP-207ENST00000596014 SNRPCP09234 159 aaKnown RBP14.28□□□□□ -0.12
PNKP-207ENST00000596014 IGLC2P0DOY2 106 aa14.28□□□□□ -0.12
PNKP-207ENST00000596014 TAGLN2P37802 199 aaKnown RBP14.28□□□□□ -0.12
PNKP-207ENST00000596014 FAM167A-AS1Q96KT0 104 aa14.28□□□□□ -0.12
PNKP-207ENST00000596014 TMPRSS5Q9H3S3 457 aa14.28□□□□□ -0.12
PNKP-207ENST00000596014 H3BQ15 152 aa14.27□□□□□ -0.12
PNKP-207ENST00000596014 RHOBP62745 196 aa14.27□□□□□ -0.12
PNKP-207ENST00000596014 SLC25A2Q9BXI2 301 aa14.27□□□□□ -0.12
PNKP-207ENST00000596014 RPS10P5Q9NQ39 176 aa14.27□□□□□ -0.12
PNKP-207ENST00000596014 TMEM14CQ9P0S9 112 aa14.27□□□□□ -0.12
PNKP-207ENST00000596014 TRAV8-2A0A0B4J237 113 aa14.26□□□□□ -0.13
PNKP-207ENST00000596014 A0A1W2PPV4 95 aa14.26□□□□□ -0.13
PNKP-207ENST00000596014 C7orf77A4D0Y5 90 aa14.26□□□□□ -0.13
PNKP-207ENST00000596014 MEF2BQ02080 365 aaPredicted RBP14.26□□□□□ -0.13
PNKP-207ENST00000596014 IQCF2Q8IXL9 164 aa14.26□□□□□ -0.13
PNKP-207ENST00000596014 IGFL4Q6B9Z1 124 aa14.26□□□□□ -0.13
PNKP-207ENST00000596014 SMCO4Q9NRQ5 59 aa14.26□□□□□ -0.13
PNKP-207ENST00000596014 ZNF586Q9NXT0 402 aa14.26□□□□□ -0.13
PNKP-207ENST00000596014 KNCNA6PVL3 124 aa14.25□□□□□ -0.13
PNKP-207ENST00000596014 H3BTX0 84 aa14.25□□□□□ -0.13
PNKP-207ENST00000596014 NDUFS6O75380 124 aaKnown RBP14.25□□□□□ -0.13
PNKP-207ENST00000596014 PYYP10082 97 aa14.25□□□□□ -0.13
PNKP-207ENST00000596014 RPL35AP18077 110 aaKnown RBP14.25□□□□□ -0.13
PNKP-207ENST00000596014 AKR1C3P42330 323 aa14.25□□□□□ -0.13
PNKP-207ENST00000596014 ACTL10Q5JWF8 245 aa14.25□□□□□ -0.13
PNKP-207ENST00000596014 C20orf173Q96LM9 149 aa14.25□□□□□ -0.13
PNKP-207ENST00000596014 HUWE1Q7Z6Z7 4374 aaKnown RBP14.25□□□□□ -0.13
PNKP-207ENST00000596014 HIST1H1EP10412 219 aaKnown RBP14.24□□□□□ -0.13
PNKP-207ENST00000596014 RNF182Q8N6D2 247 aa14.24□□□□□ -0.13
PNKP-207ENST00000596014 NIPSNAP3BQ9BS92 247 aa14.24□□□□□ -0.13
PNKP-207ENST00000596014 OR51M1Q9H341 326 aa14.24□□□□□ -0.13
PNKP-207ENST00000596014 STAG3L2P0CL84 134 aa14.23□□□□□ -0.13
PNKP-207ENST00000596014 STAG3L3P0CL85 134 aa14.23□□□□□ -0.13
PNKP-207ENST00000596014 DEFB1P60022 68 aa14.23□□□□□ -0.13
PNKP-207ENST00000596014 STHQ8IWL8 128 aa14.23□□□□□ -0.13
PNKP-207ENST00000596014 ZNF331Q9NQX6 463 aaPredicted RBP14.23□□□□□ -0.13
PNKP-207ENST00000596014 SLC17A3O00476 420 aa14.23□□□□□ -0.13
PNKP-207ENST00000596014 NHLRC4P0CG21 123 aaPredicted RBP14.23□□□□□ -0.13
PNKP-207ENST00000596014 ARL14EPLP0DKL9 152 aa14.23□□□□□ -0.13
PNKP-207ENST00000596014 TAS2R45P59539 299 aa14.23□□□□□ -0.13
PNKP-207ENST00000596014 TVP23CQ96ET8 276 aa14.23□□□□□ -0.13
PNKP-207ENST00000596014 SLC50A1Q9BRV3 221 aa14.23□□□□□ -0.13
PNKP-207ENST00000596014 PAXXQ9BUH6 204 aa14.23□□□□□ -0.13
PNKP-207ENST00000596014 TENM3Q9P273 2699 aa14.23□□□□□ -0.13
PNKP-207ENST00000596014 OR7C2O60412 319 aa14.22□□□□□ -0.13
PNKP-207ENST00000596014 CXorf1O96002 111 aa14.22□□□□□ -0.13
PNKP-207ENST00000596014 HLA-DMBP28068 263 aa14.22□□□□□ -0.13
PNKP-207ENST00000596014 APOC4P55056 127 aa14.22□□□□□ -0.13
PNKP-207ENST00000596014 ZNF503Q96F45 646 aa14.22□□□□□ -0.13
PNKP-207ENST00000596014 SAV1Q9H4B6 383 aaPredicted RBP14.22□□□□□ -0.13
PNKP-207ENST00000596014 TRBV19A0A075B6N1 114 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 KIR2DL5BA0A0G2JN68 375 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 KIR2DL5BA0A0G2JPC4 375 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 TMEM250H0YL14 139 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 PAGE4O60829 102 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 PSG3Q16557 428 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 GDF5OSQ5U4N7 250 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 FOXI2Q6ZQN5 318 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 TRPT1Q86TN4 253 aaKnown RBP14.21□□□□□ -0.13
PNKP-207ENST00000596014 KIR2DL5AQ8N109 375 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 C15orf54Q8N8G6 183 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 KIR2DL5BQ8NHK3 375 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 FXYD5Q96DB9 178 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 TM2D3Q9BRN9 247 aa14.21□□□□□ -0.13
PNKP-207ENST00000596014 LOC105371267A0A1B0GV96 52 aa14.2□□□□□ -0.14
PNKP-207ENST00000596014 F6UB75 175 aa14.2□□□□□ -0.14
PNKP-207ENST00000596014 H3BMM0 161 aa14.2□□□□□ -0.14
PNKP-207ENST00000596014 ZNF253O75346 499 aa14.2□□□□□ -0.14
PNKP-207ENST00000596014 OR10J4P0C629 311 aa14.2□□□□□ -0.14
PNKP-207ENST00000596014 NBEAP1P0C6P0 100 aa14.2□□□□□ -0.14
PNKP-207ENST00000596014 BLNKQ8WV28 456 aa14.2□□□□□ -0.14
PNKP-207ENST00000596014 NDUFB4O95168 129 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms