RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 C1orf122Q6ZSJ8 110 aa13.47□□□□□ -0.25
SHKBP1-205ENST00000594973 THAP8Q8NA92 274 aa13.47□□□□□ -0.25
SHKBP1-205ENST00000594973 C10orf113Q5VZT2 155 aa13.46□□□□□ -0.25
SHKBP1-205ENST00000594973 MRPL32Q9BYC8 188 aaKnown RBP13.46□□□□□ -0.25
SHKBP1-205ENST00000594973 A0A1W2PPM0 123 aa13.46□□□□□ -0.26
SHKBP1-205ENST00000594973 VWC2LB2RUY7 222 aa13.46□□□□□ -0.26
SHKBP1-205ENST00000594973 ORM2P19652 201 aa13.46□□□□□ -0.26
SHKBP1-205ENST00000594973 HSD52Q0P140 79 aa13.46□□□□□ -0.26
SHKBP1-205ENST00000594973 PATE2Q6UY27 113 aa13.46□□□□□ -0.26
SHKBP1-205ENST00000594973 SLC25A2Q9BXI2 301 aa13.46□□□□□ -0.26
SHKBP1-205ENST00000594973 NCBP2LA6PVI3 153 aaKnown RBP13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 SIVA1O15304 175 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 IGHV4-39P01824 125 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 CRYGCP07315 174 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 FGF6P10767 208 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 KIR3DS1Q14943 382 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 PVRIGQ6DKI7 326 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 SIRPDQ9H106 197 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 C7orf69Q9H7B7 122 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 SPCS1Q9Y6A9 102 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 OVOL3O00110 214 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 PYYP10082 97 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 LMO4P61968 165 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 FAM167A-AS1Q96KT0 104 aa13.45□□□□□ -0.26
SHKBP1-205ENST00000594973 ZNF462Q96JM2 2506 aa13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 FOXA3P55318 350 aaPredicted RBP13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 UBE2L3P68036 154 aaKnown RBP13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 CT83Q5H943 113 aa13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 TMEM116Q8NCL8 245 aa13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 OR9G4Q8NGQ1 327 aa13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 OR1L4Q8NGR5 311 aa13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 CSMD2Q7Z408 3487 aa13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 SCGB2A2Q13296 93 aa13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 CCDC144NLQ6NUI1 221 aa13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 LINC00305Q7Z4B0 112 aa13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 NPBQ8NG41 125 aa13.44□□□□□ -0.26
SHKBP1-205ENST00000594973 PEX7O00628 323 aa13.43□□□□□ -0.26
SHKBP1-205ENST00000594973 GOSR1O95249 250 aa13.43□□□□□ -0.26
SHKBP1-205ENST00000594973 PRB1P04280 392 aa13.43□□□□□ -0.26
SHKBP1-205ENST00000594973 FA2HQ7L5A8 372 aa13.43□□□□□ -0.26
SHKBP1-205ENST00000594973 RABAC1Q9UI14 185 aa13.43□□□□□ -0.26
SHKBP1-205ENST00000594973 A8MWL6 223 aa13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 NDUFA3O95167 84 aa13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 CENPEQ02224 2701 aa13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 FOXE3Q13461 319 aa13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 C5orf64Q2M2E5 130 aa13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 BOD1L2Q8IYS8 172 aa13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 OR4X2Q8NGF9 303 aa13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 LINC00479Q96M42 142 aa13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 FABP2P12104 132 aa13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 CD300EQ496F6 205 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 KLF17Q5JT82 389 aaPredicted RBP13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 GFRA4Q9GZZ7 299 aa13.42□□□□□ -0.26
SHKBP1-205ENST00000594973 TRGV9Q99603 122 aa13.41□□□□□ -0.26
SHKBP1-205ENST00000594973 CCL19Q99731 98 aa13.41□□□□□ -0.26
SHKBP1-205ENST00000594973 PAXXQ9BUH6 204 aa13.41□□□□□ -0.26
SHKBP1-205ENST00000594973 GTSF1LQ9H1H1 148 aa13.41□□□□□ -0.26
SHKBP1-205ENST00000594973 I3L2K1 104 aa13.41□□□□□ -0.26
SHKBP1-205ENST00000594973 MINOS1Q5TGZ0 78 aa13.41□□□□□ -0.26
SHKBP1-205ENST00000594973 ZNF329Q86UD4 541 aa13.41□□□□□ -0.26
SHKBP1-205ENST00000594973 ZNF747Q9BV97 191 aa13.41□□□□□ -0.26
SHKBP1-205ENST00000594973 RPP21Q9H633 154 aaKnown RBP13.41□□□□□ -0.26
SHKBP1-205ENST00000594973 MINOS1-NBL1R4GNA1 71 aa13.41□□□□□ -0.26
SHKBP1-205ENST00000594973 EPG5Q9HCE0 2579 aa13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 S100A7AQ86SG5 101 aa13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 PRSS22Q9GZN4 317 aa13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 TEX48A0A1B0GUV7 120 aa13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 A1L4Q6 167 aa13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 J3QR89 54 aa13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 RPL24P83731 157 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 SMAGPQ0VAQ4 97 aa13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 ASPHD1Q5U4P2 390 aa13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 MCRIP2Q9BUT9 160 aaKnown RBP13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 S4R3C0 116 aa13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 LRRK2Q5S007 2527 aa13.4□□□□□ -0.26
SHKBP1-205ENST00000594973 SNAI2O43623 268 aa13.39□□□□□ -0.27
SHKBP1-205ENST00000594973 UBE2E1P51965 193 aa13.39□□□□□ -0.27
SHKBP1-205ENST00000594973 PERPQ96FX8 193 aa13.39□□□□□ -0.27
SHKBP1-205ENST00000594973 SAA4P35542 130 aa13.39□□□□□ -0.27
SHKBP1-205ENST00000594973 NDPQ00604 133 aa13.39□□□□□ -0.27
SHKBP1-205ENST00000594973 Q5PR19 223 aa13.39□□□□□ -0.27
SHKBP1-205ENST00000594973 ADAMTSL5Q6ZMM2 481 aa13.39□□□□□ -0.27
SHKBP1-205ENST00000594973 WFDC12Q8WWY7 111 aa13.39□□□□□ -0.27
SHKBP1-205ENST00000594973 SRSF8Q9BRL6 282 aaKnown RBP13.39□□□□□ -0.27
SHKBP1-205ENST00000594973 TMUB1Q9BVT8 246 aa13.39□□□□□ -0.27
SHKBP1-205ENST00000594973 ZNF492Q9P255 531 aa13.39□□□□□ -0.27
SHKBP1-205ENST00000594973 FAM208BQ5VWN6 2430 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 GAGE12HA6NDE8 117 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 OOSP1A8MZH6 123 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 H0Y8G0 127 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 K7EIM0 57 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 SMAD7O15105 426 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 CSN1S1P47710 185 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 TCTEX1D4Q5JR98 221 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 FOXI2Q6ZQN5 318 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 RBPMS2Q6ZRY4 209 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 ARPC1AQ92747 370 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 RASL11BQ9BPW5 248 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 SPATA25Q9BR10 227 aa13.38□□□□□ -0.27
SHKBP1-205ENST00000594973 CHEK1O14757 476 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms