RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 FOXE3Q13461 319 aa10.35□□□□□ -0.75
VRK3-209ENST00000594948 THYN1Q9P016 225 aa10.35□□□□□ -0.75
VRK3-209ENST00000594948 K7EP34 96 aa10.34□□□□□ -0.75
VRK3-209ENST00000594948 M0R1W7 72 aa10.34□□□□□ -0.75
VRK3-209ENST00000594948 NDUFS7O75251 213 aa10.34□□□□□ -0.75
VRK3-209ENST00000594948 NPYP01303 97 aa10.34□□□□□ -0.75
VRK3-209ENST00000594948 EGR2P11161 476 aaPredicted RBP10.34□□□□□ -0.75
VRK3-209ENST00000594948 ZNF562Q6V9R5 426 aa10.34□□□□□ -0.75
VRK3-209ENST00000594948 MAP1LC3AQ9H492 121 aa10.34□□□□□ -0.75
VRK3-209ENST00000594948 C21orf62Q9NYP8 219 aa10.34□□□□□ -0.75
VRK3-209ENST00000594948 ONECUT1Q9UBC0 465 aa10.34□□□□□ -0.75
VRK3-209ENST00000594948 TMSB15BA0A087X1C1 80 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 ODF3BA8MYP8 253 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 KLK10O43240 276 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 Q8NA96 180 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 HIGD1BQ9P298 99 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 IGKV2-40A0A087WW87 121 aaPredicted RBP10.33□□□□□ -0.76
VRK3-209ENST00000594948 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.33□□□□□ -0.76
VRK3-209ENST00000594948 SNAI2O43623 268 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 IGKV2D-40P01614 121 aaPredicted RBP10.33□□□□□ -0.76
VRK3-209ENST00000594948 PRB3Q04118 309 aaPredicted RBP10.33□□□□□ -0.76
VRK3-209ENST00000594948 KIR3DS1Q14943 382 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 TWIST1Q15672 202 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 ARPC1AQ92747 370 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 PSMG3-AS1Q96PY0 264 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 NXT2Q9NPJ8 142 aaKnown RBP10.33□□□□□ -0.76
VRK3-209ENST00000594948 OTOGLQ3ZCN5 2332 aa10.33□□□□□ -0.76
VRK3-209ENST00000594948 OOSP1A8MZH6 123 aa10.32□□□□□ -0.76
VRK3-209ENST00000594948 HLA-DRB4P13762 266 aa10.32□□□□□ -0.76
VRK3-209ENST00000594948 FCER1GP30273 86 aa10.32□□□□□ -0.76
VRK3-209ENST00000594948 BCL6BQ8N143 479 aaPredicted RBP10.32□□□□□ -0.76
VRK3-209ENST00000594948 OR5A1Q8NGJ0 315 aa10.32□□□□□ -0.76
VRK3-209ENST00000594948 RNF185Q96GF1 192 aa10.32□□□□□ -0.76
VRK3-209ENST00000594948 HLA-DRB4X5D2U9 266 aa10.32□□□□□ -0.76
VRK3-209ENST00000594948 RBAKDNA6NC62 111 aa10.31□□□□□ -0.76
VRK3-209ENST00000594948 FABP5P3A8MUU1 101 aa10.31□□□□□ -0.76
VRK3-209ENST00000594948 LYNX1G3V0Z9 82 aa10.31□□□□□ -0.76
VRK3-209ENST00000594948 LYNX1P0DP58 116 aa10.31□□□□□ -0.76
VRK3-209ENST00000594948 UQCRFS1P47985 274 aa10.31□□□□□ -0.76
VRK3-209ENST00000594948 RAB9AP51151 201 aa10.31□□□□□ -0.76
VRK3-209ENST00000594948 ZNF672Q499Z4 452 aaPredicted RBP10.31□□□□□ -0.76
VRK3-209ENST00000594948 KLF17Q5JT82 389 aaPredicted RBP10.31□□□□□ -0.76
VRK3-209ENST00000594948 CCDC144NLQ6NUI1 221 aa10.31□□□□□ -0.76
VRK3-209ENST00000594948 ABHD17AQ96GS6 310 aa10.31□□□□□ -0.76
VRK3-209ENST00000594948 JMJD8Q96S16 334 aa10.31□□□□□ -0.76
VRK3-209ENST00000594948 SMPXQ9UHP9 88 aa10.31□□□□□ -0.76
VRK3-209ENST00000594948 SH3BGRL2Q9UJC5 107 aa10.31□□□□□ -0.76
VRK3-209ENST00000594948 A0A0G2JLM5 398 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 IGHG4P01861 327 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 PRTN3P24158 256 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 ZNF80P51504 273 aaPredicted RBP10.3□□□□□ -0.76
VRK3-209ENST00000594948 EBI3Q14213 229 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 KLK9Q2XQG4 91 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 ZNF575Q86XF7 245 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 Q8N6K4 173 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 KLK9Q9UKQ9 250 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 SMAD5-AS1Q9Y6J3 95 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 WDFY4Q6ZS81 3184 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 OR2K2Q8NGT1 345 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 VKORC1Q9BQB6 163 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 HILPDAQ9Y5L2 63 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 BDP1A6H8Y1 2624 aa10.3□□□□□ -0.76
VRK3-209ENST00000594948 COL6A3P12111 3177 aa10.29□□□□□ -0.76
VRK3-209ENST00000594948 SMKR1H3BMG3 65 aa10.29□□□□□ -0.76
VRK3-209ENST00000594948 H3BUT2 72 aa10.29□□□□□ -0.76
VRK3-209ENST00000594948 C1orf122Q6ZSJ8 110 aa10.29□□□□□ -0.76
VRK3-209ENST00000594948 VGLL1Q99990 258 aa10.29□□□□□ -0.76
VRK3-209ENST00000594948 CSTL1Q9H114 145 aa10.29□□□□□ -0.76
VRK3-209ENST00000594948 ABCA1O95477 2261 aa10.29□□□□□ -0.76
VRK3-209ENST00000594948 A0A1W2PPM0 123 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 PRSS47A8MTI9 375 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 ATP5LO75964 103 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 CTSGP08311 255 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 EVI2AP22794 236 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 HES1Q14469 280 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 ODF1Q14990 250 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 FBXL19-AS1Q494R0 122 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 NEGR1Q7Z3B1 354 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 S4R3C0 116 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 PKDREJQ9NTG1 2253 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 SPENQ96T58 3664 aaKnown RBP10.28□□□□□ -0.76
VRK3-209ENST00000594948 TNFRSF6BO95407 300 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 MINOS1Q5TGZ0 78 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 PCP2Q8IVA1 136 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 Q8N8P6 123 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 Q8TAT8 98 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 TIMD4Q96H15 378 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 SLC50A1Q9BRV3 221 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 DKK2Q9UBU2 259 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 MINOS1-NBL1R4GNA1 71 aa10.28□□□□□ -0.76
VRK3-209ENST00000594948 G3V4G9 280 aa10.27□□□□□ -0.77
VRK3-209ENST00000594948 ORM1P02763 201 aa10.27□□□□□ -0.77
VRK3-209ENST00000594948 SMIM17P0DL12 118 aa10.27□□□□□ -0.77
VRK3-209ENST00000594948 LEPP41159 167 aa10.27□□□□□ -0.77
VRK3-209ENST00000594948 NMUP48645 174 aa10.27□□□□□ -0.77
VRK3-209ENST00000594948 NDPQ00604 133 aa10.27□□□□□ -0.77
VRK3-209ENST00000594948 PRSS57Q6UWY2 283 aa10.27□□□□□ -0.77
VRK3-209ENST00000594948 MEGF9Q9H1U4 602 aa10.27□□□□□ -0.77
VRK3-209ENST00000594948 ROS1P08922 2347 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms