RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 ENSAO43768 121 aaKnown RBP12.17□□□□□ -0.46
PNKP-204ENST00000594661 ZNF503Q96F45 646 aa12.17□□□□□ -0.46
PNKP-204ENST00000594661 C19orf24Q9BVV8 132 aa12.17□□□□□ -0.46
PNKP-204ENST00000594661 SOX21Q9Y651 276 aaPredicted RBP12.17□□□□□ -0.46
PNKP-204ENST00000594661 H0Y8G0 127 aa12.17□□□□□ -0.46
PNKP-204ENST00000594661 OVOL3O00110 214 aa12.17□□□□□ -0.46
PNKP-204ENST00000594661 WFDC2Q14508 124 aa12.17□□□□□ -0.46
PNKP-204ENST00000594661 ZNF747Q9BV97 191 aa12.17□□□□□ -0.46
PNKP-204ENST00000594661 INSIG2Q9Y5U4 225 aa12.17□□□□□ -0.46
PNKP-204ENST00000594661 IGHV1-3A0A0C4DH29 117 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 A0A1W2PRD5 423 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 A0A1W2PRF3 423 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 A0A1W2PRM7 423 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 GATA3P23771 443 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
PNKP-204ENST00000594661 MLANAQ16655 118 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 VMA21Q3ZAQ7 101 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 C10orf55Q5SWW7 151 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 C8orf86Q6ZUL3 223 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 TPSG1Q9NRR2 321 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 SS18L2Q9UHA2 77 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 IGKV1OR2-108A0A075B7D4 117 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 KLRD1Q13241 179 aa12.16□□□□□ -0.46
PNKP-204ENST00000594661 LY6LH3BQJ8 138 aa12.15□□□□□ -0.46
PNKP-204ENST00000594661 M0R1W7 72 aa12.15□□□□□ -0.46
PNKP-204ENST00000594661 ACTL6BO94805 426 aa12.15□□□□□ -0.46
PNKP-204ENST00000594661 CD69Q07108 199 aa12.15□□□□□ -0.46
PNKP-204ENST00000594661 C18orf15Q96N68 181 aa12.15□□□□□ -0.46
PNKP-204ENST00000594661 C7orf69Q9H7B7 122 aa12.15□□□□□ -0.46
PNKP-204ENST00000594661 VPS13CQ709C8 3753 aa12.15□□□□□ -0.46
PNKP-204ENST00000594661 CGB1A6NKQ9 187 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 NCR2O95944 276 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 CNTFRP26992 372 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 TAS2R45P59539 299 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 SSBP2P81877 361 aaPredicted RBP12.14□□□□□ -0.47
PNKP-204ENST00000594661 ATP5G2Q06055 141 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 WT1-ASQ06250 92 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 HCP5Q6MZN7 132 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 LCNL1Q6ZST4 164 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 ZNF843Q8N446 348 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 PHLDA1Q8WV24 401 aaPredicted RBP12.14□□□□□ -0.47
PNKP-204ENST00000594661 RPEQ96AT9 228 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 RNF183Q96D59 192 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 BPESC1Q9GZL8 116 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 CYSLTR1Q9Y271 337 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 AMMECR1Q9Y4X0 333 aaPredicted RBP12.14□□□□□ -0.47
PNKP-204ENST00000594661 INS-IGF2F8WCM5 200 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 IGHV4-39P01824 125 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 MRGPRG-AS1Q2M3A8 158 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 ASPHD1Q5U4P2 390 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 ZNF502Q8TBZ5 544 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 IGFBPL1Q8WX77 278 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 TMUB1Q9BVT8 246 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 ZNF462Q96JM2 2506 aa12.14□□□□□ -0.47
PNKP-204ENST00000594661 UTP20O75691 2785 aaKnown RBP12.14□□□□□ -0.47
PNKP-204ENST00000594661 MYO18BQ8IUG5 2567 aa12.13□□□□□ -0.47
PNKP-204ENST00000594661 A0A1W2PPI3 338 aa12.13□□□□□ -0.47
PNKP-204ENST00000594661 FBLL1A6NHQ2 334 aaKnown RBP12.13□□□□□ -0.47
PNKP-204ENST00000594661 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
PNKP-204ENST00000594661 OR11H6Q8NGC7 330 aa12.13□□□□□ -0.47
PNKP-204ENST00000594661 CACNG8Q8WXS5 425 aa12.13□□□□□ -0.47
PNKP-204ENST00000594661 TRBV7-9A0A0J9YWB2 115 aa12.13□□□□□ -0.47
PNKP-204ENST00000594661 E9PLD3 99 aa12.13□□□□□ -0.47
PNKP-204ENST00000594661 PRTN3P24158 256 aa12.13□□□□□ -0.47
PNKP-204ENST00000594661 PLXNB1O43157 2135 aa12.12□□□□□ -0.47
PNKP-204ENST00000594661 NAV3Q8IVL0 2385 aa12.12□□□□□ -0.47
PNKP-204ENST00000594661 SUB1P53999 127 aaKnown RBP eCLIP12.12□□□□□ -0.47
PNKP-204ENST00000594661 GAGE5Q13069 117 aa12.12□□□□□ -0.47
PNKP-204ENST00000594661 GAGE6Q13070 117 aa12.12□□□□□ -0.47
PNKP-204ENST00000594661 LGALS9BQ3B8N2 356 aa12.12□□□□□ -0.47
PNKP-204ENST00000594661 ETDBQ3ZM63 59 aa12.12□□□□□ -0.47
PNKP-204ENST00000594661 LGALS9CQ6DKI2 356 aa12.12□□□□□ -0.47
PNKP-204ENST00000594661 SH2D6Q7Z4S9 175 aa12.12□□□□□ -0.47
PNKP-204ENST00000594661 ODF3BA8MYP8 253 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 SPINK8P0C7L1 97 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 CD24P25063 80 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 VMO1Q7Z5L0 202 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 CDIP1Q9H305 208 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 EPG5Q9HCE0 2579 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 SVEP1Q4LDE5 3571 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 A8MWL6 223 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 ZNF138P52744 262 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 LMO4P61968 165 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 CT83Q5H943 113 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 ARPC1AQ92747 370 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 CCL19Q99731 98 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 HIGD1BQ9P298 99 aa12.11□□□□□ -0.47
PNKP-204ENST00000594661 TIMM23O14925 209 aa12.1□□□□□ -0.47
PNKP-204ENST00000594661 CRYGBP07316 175 aa12.1□□□□□ -0.47
PNKP-204ENST00000594661 HERV-K104P63124 156 aa12.1□□□□□ -0.47
PNKP-204ENST00000594661 LINC00479Q96M42 142 aa12.1□□□□□ -0.47
PNKP-204ENST00000594661 DPM3Q9P2X0 92 aa12.1□□□□□ -0.47
PNKP-204ENST00000594661 PRO0461Q9UI25 63 aa12.1□□□□□ -0.47
PNKP-204ENST00000594661 IGHV3-48P01763 117 aa12.1□□□□□ -0.47
PNKP-204ENST00000594661 CSN1S1P47710 185 aa12.1□□□□□ -0.47
PNKP-204ENST00000594661 PRR31Q5SQ13 230 aa12.1□□□□□ -0.47
PNKP-204ENST00000594661 TMEM116Q8NCL8 245 aa12.1□□□□□ -0.47
PNKP-204ENST00000594661 HOXB4P17483 251 aaPredicted RBP12.09□□□□□ -0.47
PNKP-204ENST00000594661 FXYD2P54710 66 aa12.09□□□□□ -0.47
PNKP-204ENST00000594661 SIRPDQ9H106 197 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms