RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 UBQLN2Q9UHD9 624 aa12.58□□□□□ -0.4
LTBP4-209ENST00000594116 HBE1P02100 147 aa12.57□□□□□ -0.4
LTBP4-209ENST00000594116 ID1P41134 155 aa12.57□□□□□ -0.4
LTBP4-209ENST00000594116 CMC4P56277 68 aaPredicted RBP12.57□□□□□ -0.4
LTBP4-209ENST00000594116 PSG9Q00887 426 aa12.57□□□□□ -0.4
LTBP4-209ENST00000594116 LYPD1Q8N2G4 141 aa12.57□□□□□ -0.4
LTBP4-209ENST00000594116 DEFB125Q8N687 156 aa12.57□□□□□ -0.4
LTBP4-209ENST00000594116 TMPRSS5Q9H3S3 457 aa12.57□□□□□ -0.4
LTBP4-209ENST00000594116 MAP6D1Q9H9H5 199 aa12.57□□□□□ -0.4
LTBP4-209ENST00000594116 RETNQ9HD89 108 aa12.57□□□□□ -0.4
LTBP4-209ENST00000594116 CLEC5AQ9NY25 188 aa12.57□□□□□ -0.4
LTBP4-209ENST00000594116 DNAH1Q9P2D7 4330 aa12.57□□□□□ -0.4
LTBP4-209ENST00000594116 RBMY1BA6NDE4 496 aaKnown RBP12.56□□□□□ -0.4
LTBP4-209ENST00000594116 RBMY1EA6NEQ0 496 aaKnown RBP12.56□□□□□ -0.4
LTBP4-209ENST00000594116 OR11H12B2RN74 326 aa12.56□□□□□ -0.4
LTBP4-209ENST00000594116 RBMY1DP0C7P1 496 aaKnown RBP12.56□□□□□ -0.4
LTBP4-209ENST00000594116 ZNF688P0C7X2 276 aa12.56□□□□□ -0.4
LTBP4-209ENST00000594116 SNRPD3P62318 126 aaKnown RBP12.56□□□□□ -0.4
LTBP4-209ENST00000594116 LYPD6BQ8NI32 183 aa12.56□□□□□ -0.4
LTBP4-209ENST00000594116 C20orf173Q96LM9 149 aa12.56□□□□□ -0.4
LTBP4-209ENST00000594116 WFDC10AQ9H1F0 79 aa12.56□□□□□ -0.4
LTBP4-209ENST00000594116 SRD5A3Q9H8P0 318 aa12.56□□□□□ -0.4
LTBP4-209ENST00000594116 TEX46H3BTG2 121 aa12.55□□□□□ -0.4
LTBP4-209ENST00000594116 HLA-DMBP28068 263 aa12.55□□□□□ -0.4
LTBP4-209ENST00000594116 IGFL4Q6B9Z1 124 aa12.55□□□□□ -0.4
LTBP4-209ENST00000594116 ZNF767PQ75MW2 155 aa12.55□□□□□ -0.4
LTBP4-209ENST00000594116 IQCF2Q8IXL9 164 aa12.55□□□□□ -0.4
LTBP4-209ENST00000594116 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
LTBP4-209ENST00000594116 ARL2-SNX15V9GYD0 113 aa12.55□□□□□ -0.4
LTBP4-209ENST00000594116 A0A1B0GV50 99 aa12.54□□□□□ -0.4
LTBP4-209ENST00000594116 A0A1W2PRE2 83 aa12.54□□□□□ -0.4
LTBP4-209ENST00000594116 DEFB131AP59861 70 aa12.54□□□□□ -0.4
LTBP4-209ENST00000594116 CCL20P78556 96 aa12.54□□□□□ -0.4
LTBP4-209ENST00000594116 PSG3Q16557 428 aa12.54□□□□□ -0.4
LTBP4-209ENST00000594116 PSMG4Q5JS54 123 aa12.54□□□□□ -0.4
LTBP4-209ENST00000594116 RNF182Q8N6D2 247 aa12.54□□□□□ -0.4
LTBP4-209ENST00000594116 MRPL53Q96EL3 112 aaKnown RBP12.54□□□□□ -0.4
LTBP4-209ENST00000594116 Q9H3A6 140 aa12.54□□□□□ -0.4
LTBP4-209ENST00000594116 AAMDCQ9H7C9 122 aa12.54□□□□□ -0.4
LTBP4-209ENST00000594116 PRELID1Q9Y255 219 aa12.54□□□□□ -0.4
LTBP4-209ENST00000594116 NMBP08949 121 aa12.53□□□□□ -0.4
LTBP4-209ENST00000594116 PPT1P50897 306 aa12.53□□□□□ -0.4
LTBP4-209ENST00000594116 RANP62826 216 aaKnown RBP12.53□□□□□ -0.4
LTBP4-209ENST00000594116 PMS2P11Q13670 270 aa12.53□□□□□ -0.4
LTBP4-209ENST00000594116 EXOC3-AS1Q8N2X6 119 aa12.53□□□□□ -0.4
LTBP4-209ENST00000594116 LINC00052Q96N35 136 aa12.53□□□□□ -0.4
LTBP4-209ENST00000594116 OTORQ9NRC9 128 aa12.53□□□□□ -0.4
LTBP4-209ENST00000594116 FAM74A7A6NL05 159 aa12.52□□□□□ -0.41
LTBP4-209ENST00000594116 ICAM4Q14773 271 aa12.52□□□□□ -0.41
LTBP4-209ENST00000594116 YTHDF2Q9Y5A9 579 aaKnown RBP12.52□□□□□ -0.41
LTBP4-209ENST00000594116 GGTLC3B5MD39 225 aa12.51□□□□□ -0.41
LTBP4-209ENST00000594116 M0R3E3 92 aa12.51□□□□□ -0.41
LTBP4-209ENST00000594116 UBE2G2P60604 165 aa12.51□□□□□ -0.41
LTBP4-209ENST00000594116 ARL6IP6Q8N6S5 226 aa12.51□□□□□ -0.41
LTBP4-209ENST00000594116 ZNF738Q8NE65 137 aa12.51□□□□□ -0.41
LTBP4-209ENST00000594116 MANBALQ9NQG1 85 aa12.51□□□□□ -0.41
LTBP4-209ENST00000594116 PGPA6NDG6 321 aa12.5□□□□□ -0.41
LTBP4-209ENST00000594116 RGS13O14921 159 aa12.5□□□□□ -0.41
LTBP4-209ENST00000594116 ZNF124Q15973 351 aa12.5□□□□□ -0.41
LTBP4-209ENST00000594116 FOXI2Q6ZQN5 318 aa12.5□□□□□ -0.41
LTBP4-209ENST00000594116 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
LTBP4-209ENST00000594116 PCNPQ8WW12 178 aaKnown RBP12.5□□□□□ -0.41
LTBP4-209ENST00000594116 NKX6-2Q9C056 277 aaPredicted RBP12.5□□□□□ -0.41
LTBP4-209ENST00000594116 ZNF705FA8MVS1 300 aaPredicted RBP12.49□□□□□ -0.41
LTBP4-209ENST00000594116 PAGE4O60829 102 aa12.49□□□□□ -0.41
LTBP4-209ENST00000594116 RPUSD4Q96CM3 377 aaKnown RBP12.49□□□□□ -0.41
LTBP4-209ENST00000594116 SAV1Q9H4B6 383 aaPredicted RBP12.49□□□□□ -0.41
LTBP4-209ENST00000594116 GNG13Q9P2W3 67 aa12.49□□□□□ -0.41
LTBP4-209ENST00000594116 EPPK1P58107 5090 aaKnown RBP12.49□□□□□ -0.41
LTBP4-209ENST00000594116 A0A0J9YX75 114 aa12.48□□□□□ -0.41
LTBP4-209ENST00000594116 IFNA1P01562 189 aa12.48□□□□□ -0.41
LTBP4-209ENST00000594116 HLA-DRB4P13762 266 aa12.48□□□□□ -0.41
LTBP4-209ENST00000594116 DEFB1P60022 68 aa12.48□□□□□ -0.41
LTBP4-209ENST00000594116 SUMO1P63165 101 aaKnown RBP12.48□□□□□ -0.41
LTBP4-209ENST00000594116 CLLU1Q5K131 121 aa12.48□□□□□ -0.41
LTBP4-209ENST00000594116 CCDC28AQ8IWP9 274 aa12.48□□□□□ -0.41
LTBP4-209ENST00000594116 C5orf17Q8NAS9 161 aa12.48□□□□□ -0.41
LTBP4-209ENST00000594116 RXFP4Q8TDU9 374 aa12.48□□□□□ -0.41
LTBP4-209ENST00000594116 HLA-DRB4X5D2U9 266 aa12.48□□□□□ -0.41
LTBP4-209ENST00000594116 LOC102724200A0A096LPH7 203 aaPredicted RBP12.47□□□□□ -0.41
LTBP4-209ENST00000594116 KNCNA6PVL3 124 aa12.47□□□□□ -0.41
LTBP4-209ENST00000594116 A8MTW9 85 aa12.47□□□□□ -0.41
LTBP4-209ENST00000594116 PRAC2D3DTV9 90 aa12.47□□□□□ -0.41
LTBP4-209ENST00000594116 F6UB75 175 aa12.47□□□□□ -0.41
LTBP4-209ENST00000594116 BCL2P10415 239 aa12.47□□□□□ -0.41
LTBP4-209ENST00000594116 CSN1S1P47710 185 aa12.47□□□□□ -0.41
LTBP4-209ENST00000594116 ATP5G3P48201 142 aa12.47□□□□□ -0.41
LTBP4-209ENST00000594116 RAB14P61106 215 aa12.47□□□□□ -0.41
LTBP4-209ENST00000594116 GDF5OSQ5U4N7 250 aa12.47□□□□□ -0.41
LTBP4-209ENST00000594116 OR8A1Q8NGG7 326 aa12.47□□□□□ -0.41
LTBP4-209ENST00000594116 TCEAL7Q9BRU2 100 aa12.47□□□□□ -0.41
LTBP4-209ENST00000594116 DIRC3C9JPN6 131 aa12.46□□□□□ -0.41
LTBP4-209ENST00000594116 H3BMM0 161 aa12.46□□□□□ -0.41
LTBP4-209ENST00000594116 SLC25A5P05141 298 aaKnown RBP12.46□□□□□ -0.41
LTBP4-209ENST00000594116 TAGLN2P37802 199 aaKnown RBP12.46□□□□□ -0.41
LTBP4-209ENST00000594116 ACTL10Q5JWF8 245 aa12.46□□□□□ -0.41
LTBP4-209ENST00000594116 CST9LP1Q5W188 147 aa12.46□□□□□ -0.41
LTBP4-209ENST00000594116 EBLN2Q6P2I7 272 aa12.46□□□□□ -0.41
LTBP4-209ENST00000594116 CMTM2Q8TAZ6 248 aa12.46□□□□□ -0.41
LTBP4-209ENST00000594116 CLUHP3Q96NS8 147 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms