RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PRADC1Q9BSG0 188 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 URM1Q9BTM9 101 aaKnown RBP1.67□□□□□ -2.14
VRK3-204ENST00000593912 SLC5A7Q9GZV3 580 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 ANAPC11Q9NYG5 84 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 TMEM56-RWDD3S4R434 201 aa1.67□□□□□ -2.14
VRK3-204ENST00000593912 A0A087WWL8 130 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 FBLL1A6NHQ2 334 aaKnown RBP1.66□□□□□ -2.14
VRK3-204ENST00000593912 CRYM-AS1A6NIL9 109 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 H3BTX0 84 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 GNGT2O14610 69 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 MPDU1O75352 247 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 FAM107AO95990 144 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 IGKV1-39P01597 117 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 ANGP03950 147 aaKnown RBP1.66□□□□□ -2.14
VRK3-204ENST00000593912 IGKV1D-39P04432 117 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 LINC00694P0DN24 101 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 F2RP25116 425 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 LEPP41159 167 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 CBX5P45973 191 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 RPS10P46783 165 aaKnown RBP1.66□□□□□ -2.14
VRK3-204ENST00000593912 SUB1P53999 127 aaKnown RBP eCLIP1.66□□□□□ -2.14
VRK3-204ENST00000593912 KRTAP10-10P60014 251 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 MAGOHP61326 146 aaKnown RBP1.66□□□□□ -2.14
VRK3-204ENST00000593912 ERCC8Q13216 396 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 TMED1Q13445 227 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 OPCMLQ14982 345 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 ELOBQ15370 118 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 RAB11BQ15907 218 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 ZNF876PQ49A33 203 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 HIGD2BQ4VC39 106 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 HSD17B12Q53GQ0 312 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 MPV17L2Q567V2 206 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 C1orf100Q5SVJ3 147 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 IDNKQ5T6J7 187 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 KRTAP5-1Q6L8H4 278 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 RPL22L1Q6P5R6 122 aaKnown RBP1.66□□□□□ -2.14
VRK3-204ENST00000593912 TMEM17Q86X19 198 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 FAM219AQ8IW50 185 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 CYB561D1Q8N8Q1 229 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 BPIFCQ8NFQ6 507 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 TSPAN14Q8NG11 270 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 TMEM170AQ8WVE7 144 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 RASL10AQ92737 203 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 RFKQ969G6 155 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 SMIM19Q96E16 107 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 RAB3CQ96E17 227 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 TSC22D3Q99576 134 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 EFCAB1Q9HAE3 211 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 PRR34Q9NV39 138 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 PFDN2Q9UHV9 154 aa1.66□□□□□ -2.14
VRK3-204ENST00000593912 A0A087WZ39 114 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 SPRR5A0A1B0GTR4 108 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 TRBV6-4A0A1B0GX49 114 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 C5orf51A6NDU8 294 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 ZFP92A6NM28 416 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 KLLNB2CW77 178 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 TMEM262E9PQX1 116 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 EIF3GO75821 320 aaKnown RBP eCLIP1.65□□□□□ -2.15
VRK3-204ENST00000593912 PPYP01298 95 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 SLC25A5P05141 298 aaKnown RBP1.65□□□□□ -2.15
VRK3-204ENST00000593912 LIMS3P0CW19 117 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 LIMS4P0CW20 117 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 SLC25A4P12235 298 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 PTMSP20962 102 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 TALDO1P37837 337 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 HTR2BP41595 481 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 RAB5CP51148 216 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 MRPL28Q13084 256 aaKnown RBP1.65□□□□□ -2.15
VRK3-204ENST00000593912 BSXQ3C1V8 233 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 STEAP1BQ6NZ63 245 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 Q6ZS49 121 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 C15orf56Q8N910 161 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 OR10G9Q8NGN4 311 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 LRRC20Q8TCA0 184 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 TSKUQ8WUA8 353 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 TRUB1Q8WWH5 349 aaKnown RBP1.65□□□□□ -2.15
VRK3-204ENST00000593912 MRGPRFQ96AM1 343 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 MRPL48Q96GC5 212 aaKnown RBP1.65□□□□□ -2.15
VRK3-204ENST00000593912 MAGIXQ9H6Y5 334 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 AMBNQ9NP70 447 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 FGFR1OP2Q9NVK5 253 aa1.65□□□□□ -2.15
VRK3-204ENST00000593912 A0A087WWC5 75 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 TMEM272A0A1B0GTI8 110 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 INS-IGF2F8WCM5 200 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 SLC17A3O00476 420 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 PGLYRP1O75594 196 aaPredicted RBP1.64□□□□□ -2.15
VRK3-204ENST00000593912 CTXN2P0C2S0 81 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 OR4E1P0C645 316 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 RAP2AP10114 183 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 HIST1H1DP16402 221 aaKnown RBP1.64□□□□□ -2.15
VRK3-204ENST00000593912 ORM2P19652 201 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 ETV1P50549 477 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 WNT4P56705 351 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 RAB31Q13636 194 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 MSMO1Q15800 293 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 MIAQ16674 131 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 CCDC58Q4VC31 144 aa1.64□□□□□ -2.15
VRK3-204ENST00000593912 C9orf116Q5BN46 136 aaPredicted RBP1.64□□□□□ -2.15
VRK3-204ENST00000593912 CNIH2Q6PI25 160 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms