RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 Q9H8V8 135 aa16.64■□□□□ 0.25
LSM4-202ENST00000593564 TRAV26-1A0A087WT03 109 aa16.63■□□□□ 0.25
LSM4-202ENST00000593564 H3BTX0 84 aa16.63■□□□□ 0.25
LSM4-202ENST00000593564 M6PRP20645 277 aa16.63■□□□□ 0.25
LSM4-202ENST00000593564 OR5I1Q13606 314 aa16.63■□□□□ 0.25
LSM4-202ENST00000593564 CNPY1Q3B7I2 92 aa16.63■□□□□ 0.25
LSM4-202ENST00000593564 RXFP4Q8TDU9 374 aa16.63■□□□□ 0.25
LSM4-202ENST00000593564 SAT2Q96F10 170 aaPredicted RBP16.63■□□□□ 0.25
LSM4-202ENST00000593564 ODF3Q96PU9 254 aa16.62■□□□□ 0.25
LSM4-202ENST00000593564 H3BQ15 152 aa16.61■□□□□ 0.25
LSM4-202ENST00000593564 RLN2P04090 185 aa16.61■□□□□ 0.25
LSM4-202ENST00000593564 GUK1Q16774 197 aa16.61■□□□□ 0.25
LSM4-202ENST00000593564 DNAJC4Q9NNZ3 241 aa16.61■□□□□ 0.25
LSM4-202ENST00000593564 GAGE12BA1L429 117 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 L7N2F9 121 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 GAGE7O76087 117 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 GAGE12FP0CL80 117 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 GAGE12GP0CL81 117 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 GAGE12IP0CL82 117 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 HOXA5P20719 270 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 LEPP41159 167 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 CAMLGP49069 296 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 VAMP2P63027 116 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 RAB31Q13636 194 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 TTC32Q5I0X7 151 aa16.6■□□□□ 0.25
LSM4-202ENST00000593564 SNURFLB1AK76 121 aa16.59■□□□□ 0.25
LSM4-202ENST00000593564 NPIPB6E9PJ23 425 aa16.59■□□□□ 0.25
LSM4-202ENST00000593564 H3BNG1 76 aa16.59■□□□□ 0.25
LSM4-202ENST00000593564 CT45A10P0DMU9 189 aa16.59■□□□□ 0.25
LSM4-202ENST00000593564 Q6ZRG5 221 aa16.59■□□□□ 0.25
LSM4-202ENST00000593564 UPK3BQ9BT76 320 aa16.59■□□□□ 0.25
LSM4-202ENST00000593564 A0A0J9YY99 117 aa16.58■□□□□ 0.24
LSM4-202ENST00000593564 CCSO14618 274 aa16.58■□□□□ 0.24
LSM4-202ENST00000593564 ZNF846Q147U1 533 aa16.58■□□□□ 0.24
LSM4-202ENST00000593564 NRARPQ7Z6K4 114 aa16.58■□□□□ 0.24
LSM4-202ENST00000593564 OR1L4Q8NGR5 311 aa16.58■□□□□ 0.24
LSM4-202ENST00000593564 PYGO2Q9BRQ0 406 aa16.58■□□□□ 0.24
LSM4-202ENST00000593564 KRTAP1-5Q9BYS1 174 aa16.58■□□□□ 0.24
LSM4-202ENST00000593564 Q9H3A6 140 aa16.58■□□□□ 0.24
LSM4-202ENST00000593564 TRAV12-3A0A0B4J271 114 aa16.57■□□□□ 0.24
LSM4-202ENST00000593564 J3KRW8 73 aa16.57■□□□□ 0.24
LSM4-202ENST00000593564 ZNF253O75346 499 aa16.57■□□□□ 0.24
LSM4-202ENST00000593564 IL7P13232 177 aa16.57■□□□□ 0.24
LSM4-202ENST00000593564 DAZ2Q13117 558 aaKnown RBP16.57■□□□□ 0.24
LSM4-202ENST00000593564 MIC13Q5XKP0 118 aa16.57■□□□□ 0.24
LSM4-202ENST00000593564 ZNF431Q8TF32 576 aaPredicted RBP16.57■□□□□ 0.24
LSM4-202ENST00000593564 C20orf85Q9H1P6 137 aa16.57■□□□□ 0.24
LSM4-202ENST00000593564 WDR83OSQ9Y284 106 aa16.57■□□□□ 0.24
LSM4-202ENST00000593564 LSM5Q9Y4Y9 91 aaKnown RBP16.57■□□□□ 0.24
LSM4-202ENST00000593564 TRAV5A0A0B4J249 113 aa16.56■□□□□ 0.24
LSM4-202ENST00000593564 A0A1W2PPQ1 181 aa16.56■□□□□ 0.24
LSM4-202ENST00000593564 CST7O76096 145 aa16.56■□□□□ 0.24
LSM4-202ENST00000593564 BCAP31P51572 246 aa16.56■□□□□ 0.24
LSM4-202ENST00000593564 ESRGQ1W209 222 aa16.56■□□□□ 0.24
LSM4-202ENST00000593564 MAPKAPK5-AS1Q8N8E1 139 aa16.56■□□□□ 0.24
LSM4-202ENST00000593564 PFDN5Q99471 154 aa16.56■□□□□ 0.24
LSM4-202ENST00000593564 UQCC1Q9NVA1 299 aa16.56■□□□□ 0.24
LSM4-202ENST00000593564 MRPS16Q9Y3D3 137 aaKnown RBP16.56■□□□□ 0.24
LSM4-202ENST00000593564 CAV2P51636 162 aa16.55■□□□□ 0.24
LSM4-202ENST00000593564 SPATA12Q7Z6I5 190 aa16.55■□□□□ 0.24
LSM4-202ENST00000593564 MRPL53Q96EL3 112 aaKnown RBP16.55■□□□□ 0.24
LSM4-202ENST00000593564 TMPRSS5Q9H3S3 457 aa16.55■□□□□ 0.24
LSM4-202ENST00000593564 C11orf1Q9H5F2 150 aa16.55■□□□□ 0.24
LSM4-202ENST00000593564 ZNF586Q9NXT0 402 aa16.55■□□□□ 0.24
LSM4-202ENST00000593564 VWC2Q2TAL6 325 aa16.54■□□□□ 0.24
LSM4-202ENST00000593564 Q6ZTI0 123 aa16.54■□□□□ 0.24
LSM4-202ENST00000593564 FAM25EA8MYX2 175 aa16.53■□□□□ 0.24
LSM4-202ENST00000593564 BTF3P20290 206 aaKnown RBP16.53■□□□□ 0.24
LSM4-202ENST00000593564 RPL29P47914 159 aaKnown RBP16.53■□□□□ 0.24
LSM4-202ENST00000593564 TRBV19A0A075B6N1 114 aa16.52■□□□□ 0.24
LSM4-202ENST00000593564 FAM24AA6NFZ4 105 aa16.52■□□□□ 0.24
LSM4-202ENST00000593564 PLA2G10O15496 165 aa16.52■□□□□ 0.24
LSM4-202ENST00000593564 SLC25A5P05141 298 aaKnown RBP16.52■□□□□ 0.24
LSM4-202ENST00000593564 C12orf45Q8N5I9 185 aaPredicted RBP16.52■□□□□ 0.24
LSM4-202ENST00000593564 ZNF680Q8NEM1 530 aa16.52■□□□□ 0.24
LSM4-202ENST00000593564 C18orf15Q96N68 181 aa16.52■□□□□ 0.24
LSM4-202ENST00000593564 SLC39A9Q9NUM3 307 aa16.52■□□□□ 0.24
LSM4-202ENST00000593564 C7orf71A4D174 169 aa16.51■□□□□ 0.23
LSM4-202ENST00000593564 C5orf51A6NDU8 294 aa16.51■□□□□ 0.23
LSM4-202ENST00000593564 LYRM1O43325 122 aa16.51■□□□□ 0.23
LSM4-202ENST00000593564 C11orf72Q8NBR9 251 aa16.51■□□□□ 0.23
LSM4-202ENST00000593564 CHAC2Q8WUX2 184 aa16.51■□□□□ 0.23
LSM4-202ENST00000593564 TMEM14CQ9P0S9 112 aa16.51■□□□□ 0.23
LSM4-202ENST00000593564 UBE2L5PA0A1B0GUS4 154 aa16.5■□□□□ 0.23
LSM4-202ENST00000593564 KLLNB2CW77 178 aa16.5■□□□□ 0.23
LSM4-202ENST00000593564 M0R3E3 92 aa16.5■□□□□ 0.23
LSM4-202ENST00000593564 TCRBP04435 133 aa16.5■□□□□ 0.23
LSM4-202ENST00000593564 PVALBP20472 110 aaPredicted RBP16.5■□□□□ 0.23
LSM4-202ENST00000593564 S100A11P31949 105 aa16.5■□□□□ 0.23
LSM4-202ENST00000593564 SULT1A1P50225 295 aa16.5■□□□□ 0.23
LSM4-202ENST00000593564 VSIG2Q96IQ7 327 aa16.5■□□□□ 0.23
LSM4-202ENST00000593564 C2orf50Q96LR7 162 aa16.5■□□□□ 0.23
LSM4-202ENST00000593564 LINC00467Q9BRT7 94 aa16.5■□□□□ 0.23
LSM4-202ENST00000593564 GSN-AS1Q9NRJ2 163 aa16.5■□□□□ 0.23
LSM4-202ENST00000593564 LYRM2Q9NU23 88 aaPredicted RBP16.5■□□□□ 0.23
LSM4-202ENST00000593564 TRGV2A0A075B6R0 118 aa16.49■□□□□ 0.23
LSM4-202ENST00000593564 BAXQ07812 192 aa16.49■□□□□ 0.23
LSM4-202ENST00000593564 ERCC8Q13216 396 aa16.49■□□□□ 0.23
LSM4-202ENST00000593564 FAM19A4Q96LR4 140 aa16.49■□□□□ 0.23
LSM4-202ENST00000593564 SEC22CQ9BRL7 303 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms