RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 AKR1C3P42330 323 aa8.68□□□□□ -1.02
CACNA1A-213ENST00000593267 RPL11P62913 178 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-213ENST00000593267 SAMD13Q5VXD3 122 aa8.68□□□□□ -1.02
CACNA1A-213ENST00000593267 CMTM2Q8TAZ6 248 aa8.68□□□□□ -1.02
CACNA1A-213ENST00000593267 C16orf92Q96LL3 132 aa8.68□□□□□ -1.02
CACNA1A-213ENST00000593267 SMIM7Q9BQ49 75 aa8.68□□□□□ -1.02
CACNA1A-213ENST00000593267 SELENOKQ9Y6D0 94 aa8.68□□□□□ -1.02
CACNA1A-213ENST00000593267 SERTM2A0A1B0GWG4 89 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 ZNF727A8MUV8 499 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 DIRC3C9JPN6 131 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 K7EQG2 157 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 ISLRO14498 428 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 RPL35P42766 123 aaKnown RBP8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 CNN1P51911 297 aaKnown RBP8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 ZNF674Q2M3X9 581 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 DEFB114Q30KQ6 69 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 IGFL4Q6B9Z1 124 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 RNF182Q8N6D2 247 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 DYNLRB2Q8TF09 96 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 NIPSNAP3BQ9BS92 247 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 MS4A6AQ9H2W1 248 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 RPH3ALQ9UNE2 315 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 KLF12Q9Y4X4 402 aa8.67□□□□□ -1.02
CACNA1A-213ENST00000593267 TRBV20OR9-2A0A075B6H5 130 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 IGKV3-7A0A075B6H7 116 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 TRAV2A0A0B4J234 112 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 TRAV25A0A0B4J276 109 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 C9JCJ5 164 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 TSPAN4O14817 238 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 APOC3P02656 99 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 CSN1S1P47710 185 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 TAS2R60P59551 318 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 PSG3Q16557 428 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 GUCA2BQ16661 112 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 TMEM183BQ1AE95 376 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 GOLT1AQ6ZVE7 132 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 TMEM61Q8N0U2 210 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 TMEM75Q8N9X5 138 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 FMC1Q96HJ9 113 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 C20orf173Q96LM9 149 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 IGF2BP2-AS1Q96M15 143 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 NAT8Q9UHE5 227 aa8.66□□□□□ -1.02
CACNA1A-213ENST00000593267 PKD1L1Q8TDX9 2849 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 TRBV6-1A0A0K0K1D8 114 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 RBAKDNA6NC62 111 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 ZNF705FA8MVS1 300 aaPredicted RBP8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 K7EQM0 130 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 IGLV2-11P01706 119 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 S100A9P06702 114 aaKnown RBP8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 ID1P41134 155 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 TMEM241Q24JQ0 296 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 CD300EQ496F6 205 aaPredicted RBP8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 LCN12Q6JVE5 192 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 SVBPQ8N300 66 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 GBGT1Q8N5D6 347 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 LINC00479Q96M42 142 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 SDF2L1Q9HCN8 221 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 LY96Q9Y6Y9 160 aa8.65□□□□□ -1.02
CACNA1A-213ENST00000593267 IGKV2-40A0A087WW87 121 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 TRAV34A0A0B4J273 112 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 DNASE2O00115 360 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 SAP30O75446 220 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 LTAP01374 205 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 IGKV2D-40P01614 121 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 IGLV1-51P01701 117 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 UBE2G1P62253 170 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 PAFAH1B2P68402 229 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 PNRC1Q12796 327 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 CENPWQ5EE01 88 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 SHISA2Q6UWI4 295 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 RBPMS2Q6ZRY4 209 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 Q86TA4 180 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 FAM24BQ8N5W8 94 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 OR2K2Q8NGT1 345 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 TVP23CQ96ET8 276 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 SPAG8Q99932 426 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 TRRAPQ9Y4A5 3859 aa8.64□□□□□ -1.03
CACNA1A-213ENST00000593267 TRAV8-1A0A0A6YYK1 113 aa8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 FBLL1A6NHQ2 334 aaKnown RBP8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 PRAC2D3DTV9 90 aa8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 SNAPINO95295 136 aa8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 TFPI2P48307 235 aa8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 GNG4P50150 75 aa8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 RPL23P62829 140 aaKnown RBP8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 FLI1Q01543 452 aaPredicted RBP8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 PRR31Q5SQ13 230 aa8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 LINC01551Q86U37 167 aa8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 WFDC3Q8IUB2 231 aa8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 CLRN3Q8NCR9 226 aa8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 ZNF738Q8NE65 137 aa8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 SMIM12Q96EX1 92 aa8.63□□□□□ -1.03
CACNA1A-213ENST00000593267 IZUMO1RA6ND01 250 aa8.62□□□□□ -1.03
CACNA1A-213ENST00000593267 PGPEP1LA6NFU8 196 aa8.62□□□□□ -1.03
CACNA1A-213ENST00000593267 IGLV2-8P01709 118 aa8.62□□□□□ -1.03
CACNA1A-213ENST00000593267 PRB4P10163 310 aaPredicted RBP8.62□□□□□ -1.03
CACNA1A-213ENST00000593267 SNRPD3P62318 126 aaKnown RBP8.62□□□□□ -1.03
CACNA1A-213ENST00000593267 SGK494Q96LW2 274 aa8.62□□□□□ -1.03
CACNA1A-213ENST00000593267 PSG8Q9UQ74 426 aa8.62□□□□□ -1.03
CACNA1A-213ENST00000593267 TGP01266 2768 aa8.62□□□□□ -1.03
CACNA1A-213ENST00000593267 OR4C46A6NHA9 309 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms