RNA–Protein interactions for RNA: ENST00000592410.5

ERCC1-215, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-215ENST00000592410 HIST2H2BEQ16778 126 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 ACTL10Q5JWF8 245 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.39□□□□□ -1.71
ERCC1-215ENST00000592410 SAPCD1Q5SSQ6 148 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 SAMD13Q5VXD3 122 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 PRR27Q6MZM9 219 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 Q6YL49 198 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 GOLT1AQ6ZVE7 132 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 Q86TA4 180 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 EXOC3-AS1Q8N2X6 119 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 GBGT1Q8N5D6 347 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 FRZBQ92765 325 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 HIST1H2BHQ93079 126 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 MRPL53Q96EL3 112 aaKnown RBP4.39□□□□□ -1.71
ERCC1-215ENST00000592410 HIST1H2BNQ99877 126 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 HIST1H2BMQ99879 126 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 NDFIP1Q9BT67 221 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 MLST8Q9BVC4 326 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 GNB1LQ9BYB4 327 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 RNASE7Q9H1E1 156 aaKnown RBP4.39□□□□□ -1.71
ERCC1-215ENST00000592410 ZNF331Q9NQX6 463 aaPredicted RBP4.39□□□□□ -1.71
ERCC1-215ENST00000592410 NAT8BQ9UHF3 227 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 MED13LQ71F56 2210 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 FLNCQ14315 2725 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 SETD2Q9BYW2 2564 aaPredicted RBP4.39□□□□□ -1.71
ERCC1-215ENST00000592410 COL12A1Q99715 3063 aa4.39□□□□□ -1.71
ERCC1-215ENST00000592410 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.38□□□□□ -1.71
ERCC1-215ENST00000592410 XKRY2A2RUG3 117 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 DIRC3C9JPN6 131 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 H3BTX0 84 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 SLC17A3O00476 420 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 IGHV4-59P01825 116 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 IGHG4P01861 327 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 SNRPCP09234 159 aaKnown RBP4.38□□□□□ -1.71
ERCC1-215ENST00000592410 HOXA5P20719 270 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 CDX1P47902 265 aaPredicted RBP4.38□□□□□ -1.71
ERCC1-215ENST00000592410 BLCAPP62952 87 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 ATP5L2Q7Z4Y8 100 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 PRNTQ86SH4 94 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 BCL6BQ8N143 479 aaPredicted RBP4.38□□□□□ -1.71
ERCC1-215ENST00000592410 TMEM86BQ8N661 226 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 NHLRC2Q8NBF2 726 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 NUDT10Q8NFP7 164 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 TSKUQ8WUA8 353 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 BORCS7Q96B45 105 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 NUDT11Q96G61 164 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 LINC00479Q96M42 142 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 GFRA4Q9GZZ7 299 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 PRDM13Q9H4Q3 707 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 RPP21Q9H633 154 aaKnown RBP4.38□□□□□ -1.71
ERCC1-215ENST00000592410 PEF1Q9UBV8 284 aaKnown RBP4.38□□□□□ -1.71
ERCC1-215ENST00000592410 PSG8Q9UQ74 426 aa4.38□□□□□ -1.71
ERCC1-215ENST00000592410 RBAKDNA6NC62 111 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 C19orf71A6NCJ1 209 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 SNURFLB1AK76 121 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 CHEK1O14757 476 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 HLA-DQA1P01909 254 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 ELANEP08246 267 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 SMIM6P0DI80 62 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 RPS20P60866 119 aaKnown RBP4.37□□□□□ -1.71
ERCC1-215ENST00000592410 RPL15P61313 204 aaKnown RBP4.37□□□□□ -1.71
ERCC1-215ENST00000592410 CFHR3Q02985 330 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 FOXE3Q13461 319 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 FAM106AQ4KMX7 169 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 Q6AWC8 147 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 C16orf54Q6UWD8 224 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 CIARTQ8N365 385 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-215ENST00000592410 MAPK1IP1LQ8NDC0 245 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 OR4X2Q8NGF9 303 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 C17orf77Q96MU5 243 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 NOL4LQ96MY1 436 aaPredicted RBP4.37□□□□□ -1.71
ERCC1-215ENST00000592410 FOXC2Q99958 501 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 LINC00527Q9UJ94 153 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 UFC1Q9Y3C8 167 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 ABCA1O95477 2261 aa4.37□□□□□ -1.71
ERCC1-215ENST00000592410 SPG11Q96JI7 2443 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 LRRK2Q5S007 2527 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 IGHV3-35A0A0C4DH35 117 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 A0A1B0GW15 77 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 CLPSL1A2RUU4 121 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 K7EMT4 169 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 PHOX2AO14813 284 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 HOXA3O43365 443 aaPredicted RBP4.36□□□□□ -1.71
ERCC1-215ENST00000592410 IGLV2-11P01706 119 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 PSMB8P28062 276 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 RAB4BP61018 213 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 COA6Q5JTJ3 125 aaKnown RBP4.36□□□□□ -1.71
ERCC1-215ENST00000592410 LCN12Q6JVE5 192 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 RBPMS2Q6ZRY4 209 aaKnown RBP4.36□□□□□ -1.71
ERCC1-215ENST00000592410 COX8CQ7Z4L0 72 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 GPHB5Q86YW7 130 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 LINC00518Q8N0U6 118 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 WIPF2Q8TF74 440 aaPredicted RBP4.36□□□□□ -1.71
ERCC1-215ENST00000592410 GLMPQ8WWB7 406 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 TMEM18Q96B42 140 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 C16orf92Q96LL3 132 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 C20orf173Q96LM9 149 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 SMAD5-AS1Q9Y6J3 95 aa4.36□□□□□ -1.71
ERCC1-215ENST00000592410 TRAV8-1A0A0A6YYK1 113 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms