RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 WDR83OSQ9Y284 106 aa13.2□□□□□ -0.3
CCDC43-205ENST00000592333 H3BNG1 76 aa13.19□□□□□ -0.3
CCDC43-205ENST00000592333 PLA2G10O15496 165 aa13.19□□□□□ -0.3
CCDC43-205ENST00000592333 TCRBP04435 133 aa13.19□□□□□ -0.3
CCDC43-205ENST00000592333 S100A11P31949 105 aa13.19□□□□□ -0.3
CCDC43-205ENST00000592333 RPL29P47914 159 aaKnown RBP13.19□□□□□ -0.3
CCDC43-205ENST00000592333 NRARPQ7Z6K4 114 aa13.19□□□□□ -0.3
CCDC43-205ENST00000592333 ZNF431Q8TF32 576 aaPredicted RBP13.19□□□□□ -0.3
CCDC43-205ENST00000592333 UQCC1Q9NVA1 299 aa13.19□□□□□ -0.3
CCDC43-205ENST00000592333 LEPP41159 167 aa13.18□□□□□ -0.3
CCDC43-205ENST00000592333 BCAP31P51572 246 aa13.18□□□□□ -0.3
CCDC43-205ENST00000592333 CAV2P51636 162 aa13.18□□□□□ -0.3
CCDC43-205ENST00000592333 C6orf223Q8N319 242 aa13.18□□□□□ -0.3
CCDC43-205ENST00000592333 RNF141Q8WVD5 230 aa13.18□□□□□ -0.3
CCDC43-205ENST00000592333 C2orf50Q96LR7 162 aa13.18□□□□□ -0.3
CCDC43-205ENST00000592333 PYGO2Q9BRQ0 406 aa13.18□□□□□ -0.3
CCDC43-205ENST00000592333 C11orf1Q9H5F2 150 aa13.18□□□□□ -0.3
CCDC43-205ENST00000592333 NDUFA13Q9P0J0 144 aa13.18□□□□□ -0.3
CCDC43-205ENST00000592333 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
CCDC43-205ENST00000592333 H3BQ15 152 aa13.17□□□□□ -0.3
CCDC43-205ENST00000592333 SLC17A3O00476 420 aa13.17□□□□□ -0.3
CCDC43-205ENST00000592333 BTF3P20290 206 aaKnown RBP13.17□□□□□ -0.3
CCDC43-205ENST00000592333 SULT1A1P50225 295 aa13.17□□□□□ -0.3
CCDC43-205ENST00000592333 CLINT1Q14677 625 aa13.17□□□□□ -0.3
CCDC43-205ENST00000592333 GFI1BQ5VTD9 330 aa13.17□□□□□ -0.3
CCDC43-205ENST00000592333 MORN5Q5VZ52 161 aa13.17□□□□□ -0.3
CCDC43-205ENST00000592333 LYRM2Q9NU23 88 aaPredicted RBP13.17□□□□□ -0.3
CCDC43-205ENST00000592333 LINC00588Q9Y4M8 146 aa13.17□□□□□ -0.3
CCDC43-205ENST00000592333 LSM5Q9Y4Y9 91 aaKnown RBP13.17□□□□□ -0.3
CCDC43-205ENST00000592333 DYNC1H1Q14204 4646 aaKnown RBP13.16□□□□□ -0.3
CCDC43-205ENST00000592333 C5orf51A6NDU8 294 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 SNURFLB1AK76 121 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 MPDU1O75352 247 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 RLN2P04090 185 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 M6PRP20645 277 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 HBG1P69891 147 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 HBG2P69892 147 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 DAZ2Q13117 558 aaKnown RBP13.16□□□□□ -0.3
CCDC43-205ENST00000592333 PDE6HQ13956 83 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 ATP6V1FQ16864 119 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 RXFP4Q8TDU9 374 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
CCDC43-205ENST00000592333 SLC39A9Q9NUM3 307 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 TMEM14CQ9P0S9 112 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 PRELID1Q9Y255 219 aa13.16□□□□□ -0.3
CCDC43-205ENST00000592333 FAM25EA8MYX2 175 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 PRAC2D3DTV9 90 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 CCSO14618 274 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 CST7O76096 145 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 IL15RAQ13261 267 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 TTC32Q5I0X7 151 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 MIC13Q5XKP0 118 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 SSX7Q7RTT5 188 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 STX12Q86Y82 276 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 C18orf15Q96N68 181 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 UPK3BQ9BT76 320 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 MUC4Q99102 2169 aa13.15□□□□□ -0.3
CCDC43-205ENST00000592333 SLC25A5P05141 298 aaKnown RBP13.14□□□□□ -0.31
CCDC43-205ENST00000592333 CT45A10P0DMU9 189 aa13.14□□□□□ -0.31
CCDC43-205ENST00000592333 LINC00299Q6ZSB3 139 aa13.14□□□□□ -0.31
CCDC43-205ENST00000592333 LINC00477Q96M19 166 aa13.14□□□□□ -0.31
CCDC43-205ENST00000592333 LINC00467Q9BRT7 94 aa13.14□□□□□ -0.31
CCDC43-205ENST00000592333 CCDC32Q9BV29 185 aa13.14□□□□□ -0.31
CCDC43-205ENST00000592333 Q9H8V8 135 aa13.14□□□□□ -0.31
CCDC43-205ENST00000592333 NUDT15Q9NV35 164 aa13.14□□□□□ -0.31
CCDC43-205ENST00000592333 TRBV19A0A075B6N1 114 aa13.13□□□□□ -0.31
CCDC43-205ENST00000592333 A0A1W2PPQ1 181 aa13.13□□□□□ -0.31
CCDC43-205ENST00000592333 FAM24AA6NFZ4 105 aa13.13□□□□□ -0.31
CCDC43-205ENST00000592333 SNRPCP09234 159 aaKnown RBP13.13□□□□□ -0.31
CCDC43-205ENST00000592333 HIST1H1EP10412 219 aaKnown RBP13.13□□□□□ -0.31
CCDC43-205ENST00000592333 OR5I1Q13606 314 aa13.13□□□□□ -0.31
CCDC43-205ENST00000592333 KIR3DS1Q14943 382 aa13.13□□□□□ -0.31
CCDC43-205ENST00000592333 TMEM252Q8N6L7 170 aa13.13□□□□□ -0.31
CCDC43-205ENST00000592333 ZNF680Q8NEM1 530 aa13.13□□□□□ -0.31
CCDC43-205ENST00000592333 ZNF586Q9NXT0 402 aa13.13□□□□□ -0.31
CCDC43-205ENST00000592333 TRAV6A0A075B6T7 132 aa13.12□□□□□ -0.31
CCDC43-205ENST00000592333 TRAV26-1A0A087WT03 109 aa13.12□□□□□ -0.31
CCDC43-205ENST00000592333 TRAV5A0A0B4J249 113 aa13.12□□□□□ -0.31
CCDC43-205ENST00000592333 CDK2AP2O75956 126 aa13.12□□□□□ -0.31
CCDC43-205ENST00000592333 NMBP08949 121 aa13.12□□□□□ -0.31
CCDC43-205ENST00000592333 TNP2Q05952 138 aa13.12□□□□□ -0.31
CCDC43-205ENST00000592333 BAXQ07812 192 aa13.12□□□□□ -0.31
CCDC43-205ENST00000592333 ZNF575Q86XF7 245 aa13.12□□□□□ -0.31
CCDC43-205ENST00000592333 TRAV12-3A0A0B4J271 114 aa13.11□□□□□ -0.31
CCDC43-205ENST00000592333 H3BTX0 84 aa13.11□□□□□ -0.31
CCDC43-205ENST00000592333 H2AFB2P0C5Z0 115 aa13.11□□□□□ -0.31
CCDC43-205ENST00000592333 SEC22CQ9BRL7 303 aa13.11□□□□□ -0.31
CCDC43-205ENST00000592333 PARD6GQ9BYG4 376 aaPredicted RBP13.11□□□□□ -0.31
CCDC43-205ENST00000592333 UBE2L5PA0A1B0GUS4 154 aa13.1□□□□□ -0.31
CCDC43-205ENST00000592333 GAGE12BA1L429 117 aa13.1□□□□□ -0.31
CCDC43-205ENST00000592333 KLLNB2CW77 178 aa13.1□□□□□ -0.31
CCDC43-205ENST00000592333 GAGE7O76087 117 aa13.1□□□□□ -0.31
CCDC43-205ENST00000592333 GAGE12FP0CL80 117 aa13.1□□□□□ -0.31
CCDC43-205ENST00000592333 GAGE12GP0CL81 117 aa13.1□□□□□ -0.31
CCDC43-205ENST00000592333 GAGE12IP0CL82 117 aa13.1□□□□□ -0.31
CCDC43-205ENST00000592333 ANXA2RQ3ZCQ2 193 aa13.1□□□□□ -0.31
CCDC43-205ENST00000592333 FAM19A4Q96LR4 140 aa13.1□□□□□ -0.31
CCDC43-205ENST00000592333 Q9H3A6 140 aa13.1□□□□□ -0.31
CCDC43-205ENST00000592333 IGSF23A1L1A6 192 aa13.09□□□□□ -0.31
CCDC43-205ENST00000592333 C7orf71A4D174 169 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms