RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 NOP10Q9NPE3 64 aaKnown RBP5.86□□□□□ -1.47
SMARCA4-218ENST00000592158 TIMM8BQ9Y5J9 83 aaPredicted RBP5.86□□□□□ -1.47
SMARCA4-218ENST00000592158 SSPOA2VEC9 5147 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 A0A087X0K7 114 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 A0A0J9YY99 117 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 SSSCA1O60232 199 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 NOL3O60936 208 aaKnown RBP5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 SNRPCP09234 159 aaKnown RBP5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 TMBIM6P55061 237 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 AP3S2P59780 193 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 RRAS2P62070 204 aaPredicted RBP5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 POLR2GP62487 172 aaKnown RBP eCLIP5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 OR5I1Q13606 314 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 PSG3Q16557 428 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 OR10J6PQ8NGY7 276 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 TRIM63Q969Q1 353 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 RPUSD4Q96CM3 377 aaKnown RBP5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 SOSTQ9BQB4 213 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 SLIRPQ9GZT3 109 aaKnown RBP5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 PSENENQ9NZ42 101 aa5.85□□□□□ -1.47
SMARCA4-218ENST00000592158 TRAV26-1A0A087WT03 109 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 GAGE12BA1L429 117 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 J3KRW8 73 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 ZNF701M0R085 212 aaPredicted RBP5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 ADAP1O75689 374 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 CCNKO75909 580 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 GAGE7O76087 117 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 GAGE12FP0CL80 117 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 GAGE12GP0CL81 117 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 GAGE12IP0CL82 117 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 ANXA7P20073 488 aaKnown RBP5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 HOXA5P20719 270 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 SLC38A11Q08AI6 406 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 ZNF493Q6ZR52 646 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 RNASE8Q8TDE3 154 aaKnown RBP5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 TMEM263Q8WUH6 116 aaKnown RBP5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 GNPNAT1Q96EK6 184 aaPredicted RBP5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 LINC01600Q96MT4 127 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 SLC25A21Q9BQT8 299 aaPredicted RBP5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 PARD6GQ9BYG4 376 aaPredicted RBP5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 ARL6Q9H0F7 186 aa5.84□□□□□ -1.47
SMARCA4-218ENST00000592158 PMS2P5A8MQ11 134 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 H3BMQ9 156 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 H3BTX0 84 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 H7BYZ3 331 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 SCGB1D2O95969 90 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 METTL15P1P0C7V9 234 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 M6PRP20645 277 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 PLP1P60201 277 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 SELENOTP62341 195 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 ACOT6Q3I5F7 207 aaPredicted RBP5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 GFI1BQ5VTD9 330 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 LCN15Q6UWW0 184 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 PATE2Q6UY27 113 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 S100A7AQ86SG5 101 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 CCDC190Q86UF4 302 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 Q8N814 137 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 RXFP4Q8TDU9 374 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 ARV1Q9H2C2 271 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 MGAT4CQ9UBM8 478 aa5.83□□□□□ -1.48
SMARCA4-218ENST00000592158 LRCOL1A6NCL2 159 aa5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 PRAC2D3DTV9 90 aa5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 SLC17A3O00476 420 aa5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 MRPS12O15235 138 aaKnown RBP5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 SIVA1O15304 175 aa5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 COX7A2P2O60397 106 aa5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 RLN2P04090 185 aa5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 CXCL2P19875 107 aa5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 ID3Q02535 119 aa5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 CCDC28AQ8IWP9 274 aa5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 ZNF331Q9NQX6 463 aaPredicted RBP5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 V9GYH0 126 aa5.82□□□□□ -1.48
SMARCA4-218ENST00000592158 C9orf170A2RU37 121 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 SNURFLB1AK76 121 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 GOSR2O14653 212 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 IGLV2-11P01706 119 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 UBE2MP61081 183 aaKnown RBP5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 TEPPQ6URK8 271 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 TMEM14EPQ6UXP3 125 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 LINC00305Q7Z4B0 112 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 ZNF546Q86UE3 836 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 BPIFA4PQ86YQ2 179 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 LINC00612Q8N6U2 182 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 OR10P1Q8NGE3 313 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 SMIM8Q96KF7 97 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 C20orf144Q9BQM9 153 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 SLC50A1Q9BRV3 221 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 RBM38Q9H0Z9 239 aaKnown RBP5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 TMPRSS5Q9H3S3 457 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 NPVFQ9HCQ7 196 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 NDUFA13Q9P0J0 144 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 FLVCR2Q9UPI3 526 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 RNF24Q9Y225 148 aa5.81□□□□□ -1.48
SMARCA4-218ENST00000592158 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
SMARCA4-218ENST00000592158 TRAV12-3A0A0B4J271 114 aa5.8□□□□□ -1.48
SMARCA4-218ENST00000592158 LINC00854A0A1B0GVQ3 168 aa5.8□□□□□ -1.48
SMARCA4-218ENST00000592158 FNDC10F2Z333 226 aa5.8□□□□□ -1.48
SMARCA4-218ENST00000592158 K7EPK0 472 aa5.8□□□□□ -1.48
SMARCA4-218ENST00000592158 AGPAT2O15120 278 aa5.8□□□□□ -1.48
SMARCA4-218ENST00000592158 LEPP41159 167 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms