RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 USP9YO00507 2555 aaPredicted RBP15.23■□□□□ 0.03
MBD3-209ENST00000592012 IGKV2-40A0A087WW87 121 aaPredicted RBP15.23■□□□□ 0.03
MBD3-209ENST00000592012 IGKV2D-40P01614 121 aaPredicted RBP15.23■□□□□ 0.03
MBD3-209ENST00000592012 PRR31Q5SQ13 230 aa15.23■□□□□ 0.03
MBD3-209ENST00000592012 B4DSR2 109 aa15.22■□□□□ 0.03
MBD3-209ENST00000592012 HLA-DMBP28068 263 aa15.22■□□□□ 0.03
MBD3-209ENST00000592012 LY6EQ16553 131 aa15.22■□□□□ 0.03
MBD3-209ENST00000592012 CENPEQ02224 2701 aa15.22■□□□□ 0.03
MBD3-209ENST00000592012 H3BUX3 64 aa15.22■□□□□ 0.03
MBD3-209ENST00000592012 HAX1O00165 279 aa15.22■□□□□ 0.03
MBD3-209ENST00000592012 AVPP01185 164 aa15.22■□□□□ 0.03
MBD3-209ENST00000592012 IGF1P05019 195 aa15.22■□□□□ 0.03
MBD3-209ENST00000592012 AMTP48728 403 aa15.22■□□□□ 0.03
MBD3-209ENST00000592012 COX8CQ7Z4L0 72 aa15.22■□□□□ 0.03
MBD3-209ENST00000592012 A6NDX4 124 aa15.21■□□□□ 0.03
MBD3-209ENST00000592012 ZNF324O75467 553 aaPredicted RBP15.21■□□□□ 0.03
MBD3-209ENST00000592012 CT45A10P0DMU9 189 aa15.21■□□□□ 0.03
MBD3-209ENST00000592012 DSCR9P59020 149 aa15.21■□□□□ 0.03
MBD3-209ENST00000592012 ATP6V0BQ99437 205 aa15.21■□□□□ 0.03
MBD3-209ENST00000592012 A0A087X0K7 114 aa15.21■□□□□ 0.03
MBD3-209ENST00000592012 FAM223BA6NKX1 122 aa15.21■□□□□ 0.03
MBD3-209ENST00000592012 ZNF705FA8MVS1 300 aaPredicted RBP15.21■□□□□ 0.03
MBD3-209ENST00000592012 FAM223AQ8IWN6 122 aa15.21■□□□□ 0.03
MBD3-209ENST00000592012 RNF114Q9Y508 228 aa15.21■□□□□ 0.03
MBD3-209ENST00000592012 FBN2P35556 2912 aa15.21■□□□□ 0.02
MBD3-209ENST00000592012 DEFA6Q01524 100 aa15.2■□□□□ 0.02
MBD3-209ENST00000592012 RELQ04864 619 aaPredicted RBP15.2■□□□□ 0.02
MBD3-209ENST00000592012 LCN12Q6JVE5 192 aa15.2■□□□□ 0.02
MBD3-209ENST00000592012 PRR25Q96S07 402 aa15.2■□□□□ 0.02
MBD3-209ENST00000592012 VGLL1Q99990 258 aa15.2■□□□□ 0.02
MBD3-209ENST00000592012 NRN1Q9NPD7 142 aa15.2■□□□□ 0.02
MBD3-209ENST00000592012 ANKRD17O75179 2603 aaKnown RBP15.2■□□□□ 0.02
MBD3-209ENST00000592012 IGHV3-66A0A0C4DH42 116 aa15.2■□□□□ 0.02
MBD3-209ENST00000592012 FBLL1A6NHQ2 334 aaKnown RBP15.2■□□□□ 0.02
MBD3-209ENST00000592012 IGHG2P01859 326 aa15.2■□□□□ 0.02
MBD3-209ENST00000592012 TRGV3P03979 118 aa15.2■□□□□ 0.02
MBD3-209ENST00000592012 PMCHP20382 165 aa15.2■□□□□ 0.02
MBD3-209ENST00000592012 SAPCD1Q5SSQ6 148 aa15.2■□□□□ 0.02
MBD3-209ENST00000592012 UBR5O95071 2799 aaPredicted RBP15.2■□□□□ 0.02
MBD3-209ENST00000592012 C1orf194Q5T5A4 169 aa15.19■□□□□ 0.02
MBD3-209ENST00000592012 POLQO75417 2590 aa15.19■□□□□ 0.02
MBD3-209ENST00000592012 A0A1B0GUT8 65 aa15.19■□□□□ 0.02
MBD3-209ENST00000592012 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.19■□□□□ 0.02
MBD3-209ENST00000592012 FAM19A2Q8N3H0 131 aa15.19■□□□□ 0.02
MBD3-209ENST00000592012 METTL26Q96S19 204 aa15.19■□□□□ 0.02
MBD3-209ENST00000592012 IGHV3OR16-13A0A075B7E8 117 aa15.18■□□□□ 0.02
MBD3-209ENST00000592012 IGHV3-74A0A0B4J1X5 117 aa15.18■□□□□ 0.02
MBD3-209ENST00000592012 ZNF705DP0CH99 300 aaPredicted RBP15.18■□□□□ 0.02
MBD3-209ENST00000592012 ZNF705BP0CI00 300 aaPredicted RBP15.18■□□□□ 0.02
MBD3-209ENST00000592012 PPIFP30405 207 aaKnown RBP15.18■□□□□ 0.02
MBD3-209ENST00000592012 SRSF1Q07955 248 aaKnown RBP eCLIP15.18■□□□□ 0.02
MBD3-209ENST00000592012 C14orf144Q96I85 54 aa15.18■□□□□ 0.02
MBD3-209ENST00000592012 U3KQE9 123 aa15.18■□□□□ 0.02
MBD3-209ENST00000592012 ARMS2P0C7Q2 107 aa15.18■□□□□ 0.02
MBD3-209ENST00000592012 BLCAPP62952 87 aa15.18■□□□□ 0.02
MBD3-209ENST00000592012 FAM209BQ5JX69 171 aa15.18■□□□□ 0.02
MBD3-209ENST00000592012 FAM162BQ5T6X4 162 aa15.18■□□□□ 0.02
MBD3-209ENST00000592012 NIT1Q86X76 327 aa15.18■□□□□ 0.02
MBD3-209ENST00000592012 ZNF207O43670 478 aaKnown RBP15.17■□□□□ 0.02
MBD3-209ENST00000592012 GATA3P23771 443 aa15.17■□□□□ 0.02
MBD3-209ENST00000592012 ZNF843Q8N446 348 aa15.17■□□□□ 0.02
MBD3-209ENST00000592012 Q8TAT8 98 aa15.17■□□□□ 0.02
MBD3-209ENST00000592012 M0QZK8 103 aa15.17■□□□□ 0.02
MBD3-209ENST00000592012 SH2D1AO60880 128 aa15.17■□□□□ 0.02
MBD3-209ENST00000592012 SLC25A16P16260 332 aa15.17■□□□□ 0.02
MBD3-209ENST00000592012 LOC102724200A0A096LPH7 203 aaPredicted RBP15.16■□□□□ 0.02
MBD3-209ENST00000592012 IGHV3-49A0A0A0MS15 119 aa15.16■□□□□ 0.02
MBD3-209ENST00000592012 BRI3O95415 125 aa15.16■□□□□ 0.02
MBD3-209ENST00000592012 NDFIP1Q9BT67 221 aa15.16■□□□□ 0.02
MBD3-209ENST00000592012 PRAC2D3DTV9 90 aa15.16■□□□□ 0.02
MBD3-209ENST00000592012 KRTDAPP60985 99 aa15.16■□□□□ 0.02
MBD3-209ENST00000592012 Q6AWC8 147 aa15.16■□□□□ 0.02
MBD3-209ENST00000592012 TEX43Q6ZNM6 134 aa15.16■□□□□ 0.02
MBD3-209ENST00000592012 Q6ZS46 218 aa15.16■□□□□ 0.02
MBD3-209ENST00000592012 RNF182Q8N6D2 247 aa15.16■□□□□ 0.02
MBD3-209ENST00000592012 SLC50A1Q9BRV3 221 aa15.16■□□□□ 0.02
MBD3-209ENST00000592012 NTF3P20783 257 aa15.15■□□□□ 0.02
MBD3-209ENST00000592012 ZNF80P51504 273 aaPredicted RBP15.15■□□□□ 0.02
MBD3-209ENST00000592012 PTPN13Q12923 2485 aa15.15■□□□□ 0.02
MBD3-209ENST00000592012 RIGQ13278 110 aa15.15■□□□□ 0.02
MBD3-209ENST00000592012 TDRG1Q3Y452 100 aa15.15■□□□□ 0.02
MBD3-209ENST00000592012 URB1-AS1Q96HZ7 61 aa15.15■□□□□ 0.02
MBD3-209ENST00000592012 ZANQ9Y493 2812 aa15.15■□□□□ 0.02
MBD3-209ENST00000592012 A0A096LNT2 108 aa15.14■□□□□ 0.01
MBD3-209ENST00000592012 TMEM189A5PLL7 270 aa15.14■□□□□ 0.01
MBD3-209ENST00000592012 HSBP1O75506 76 aa15.14■□□□□ 0.01
MBD3-209ENST00000592012 COX6B1P14854 86 aa15.14■□□□□ 0.01
MBD3-209ENST00000592012 REC114Q7Z4M0 266 aa15.14■□□□□ 0.01
MBD3-209ENST00000592012 Q8N976 141 aa15.14■□□□□ 0.01
MBD3-209ENST00000592012 H3BUA1 57 aa15.14■□□□□ 0.01
MBD3-209ENST00000592012 TRBV12-3P01733 135 aa15.14■□□□□ 0.01
MBD3-209ENST00000592012 ARL3P36405 182 aa15.14■□□□□ 0.01
MBD3-209ENST00000592012 GATD1Q8NB37 220 aa15.14■□□□□ 0.01
MBD3-209ENST00000592012 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.13■□□□□ 0.01
MBD3-209ENST00000592012 LINC01356Q8N9X3 169 aa15.13■□□□□ 0.01
MBD3-209ENST00000592012 TPPP3Q9BW30 176 aa15.13■□□□□ 0.01
MBD3-209ENST00000592012 TMSB15BA0A087X1C1 80 aa15.13■□□□□ 0.01
MBD3-209ENST00000592012 KIR2DL5BA0A0G2JN68 375 aa15.13■□□□□ 0.01
MBD3-209ENST00000592012 KIR2DL5BA0A0G2JPC4 375 aa15.13■□□□□ 0.01
MBD3-209ENST00000592012 A0A1B0GW15 77 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms