RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 LCN12Q6JVE5 192 aa10.75□□□□□ -0.69
SMARCA4-216ENST00000591545 IGLV1-44P01699 117 aa10.75□□□□□ -0.69
SMARCA4-216ENST00000591545 KIR3DS1Q14943 382 aa10.75□□□□□ -0.69
SMARCA4-216ENST00000591545 DEFB113Q30KQ7 82 aa10.75□□□□□ -0.69
SMARCA4-216ENST00000591545 ZNF664Q8N3J9 261 aa10.75□□□□□ -0.69
SMARCA4-216ENST00000591545 MST1LQ2TV78 715 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 SPAG8Q99932 426 aaPredicted RBP10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 SHANK2-AS3Q9BTD1 123 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 PLXND1Q9Y4D7 1925 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 MYMXA0A1B0GTQ4 84 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 SRRM4A7MD48 611 aaKnown RBP10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 TDGF1P3P51864 188 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 TMEM158Q8WZ71 300 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 TECTAO75443 2155 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 IGHV2-70P01814 119 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 ZNF562Q6V9R5 426 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 NCOR1P1Q9H4R4 102 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 DAZ1Q9NQZ3 744 aaKnown RBP10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 DOCK9Q9BZ29 2069 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 C2orf82Q6UX34 121 aa10.74□□□□□ -0.69
SMARCA4-216ENST00000591545 A0A087X0K7 114 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 K7EM74 188 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 SYNJ2BPP57105 145 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 ZC2HC1BQ5TFG8 222 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 RHPN1-AS1Q9BWJ2 59 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 NOTCH2Q04721 2471 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 A0A0G2JRQ6 117 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 NEGR1Q7Z3B1 354 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 TMEM75Q8N9X5 138 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 CHAC1Q9BUX1 264 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 ACACBO00763 2458 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 IGLV3-9A0A075B6K5 115 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 LINC01619G3V211 115 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 CSTL1Q9H114 145 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 JPT2Q9H910 190 aa10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 HELZP42694 1942 aaKnown RBP10.73□□□□□ -0.69
SMARCA4-216ENST00000591545 A0A087WX48 190 aa10.72□□□□□ -0.69
SMARCA4-216ENST00000591545 WFDC12Q8WWY7 111 aa10.72□□□□□ -0.69
SMARCA4-216ENST00000591545 DNAJC30Q96LL9 226 aa10.72□□□□□ -0.69
SMARCA4-216ENST00000591545 A8MWP6 167 aa10.72□□□□□ -0.69
SMARCA4-216ENST00000591545 OVOL3O00110 214 aa10.72□□□□□ -0.69
SMARCA4-216ENST00000591545 ZGRF1Q86YA3 2104 aa10.72□□□□□ -0.69
SMARCA4-216ENST00000591545 INSP01308 110 aa10.72□□□□□ -0.69
SMARCA4-216ENST00000591545 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
SMARCA4-216ENST00000591545 IGHV3-64A0A075B6Q5 118 aa10.72□□□□□ -0.69
SMARCA4-216ENST00000591545 FAM110DQ8TAY7 271 aaPredicted RBP10.72□□□□□ -0.69
SMARCA4-216ENST00000591545 COX11Q9Y6N1 276 aa10.72□□□□□ -0.69
SMARCA4-216ENST00000591545 Q6ZR03 302 aa10.71□□□□□ -0.69
SMARCA4-216ENST00000591545 Q6ZRM9 215 aa10.71□□□□□ -0.69
SMARCA4-216ENST00000591545 LHFPL4Q7Z7J7 247 aa10.71□□□□□ -0.69
SMARCA4-216ENST00000591545 LY6G5BQ8NDX9 201 aa10.71□□□□□ -0.69
SMARCA4-216ENST00000591545 LSM4Q9Y4Z0 139 aaKnown RBP10.71□□□□□ -0.69
SMARCA4-216ENST00000591545 COL4A4P53420 1690 aaPredicted RBP10.71□□□□□ -0.69
SMARCA4-216ENST00000591545 NDUFB8O95169 186 aa10.71□□□□□ -0.69
SMARCA4-216ENST00000591545 NDPQ00604 133 aa10.71□□□□□ -0.69
SMARCA4-216ENST00000591545 CST9LQ9H4G1 147 aa10.71□□□□□ -0.69
SMARCA4-216ENST00000591545 SELENOKQ9Y6D0 94 aa10.71□□□□□ -0.69
SMARCA4-216ENST00000591545 LEPROTO15243 131 aa10.71□□□□□ -0.7
SMARCA4-216ENST00000591545 PAX4O43316 350 aa10.71□□□□□ -0.7
SMARCA4-216ENST00000591545 LOXP28300 417 aaPredicted RBP10.71□□□□□ -0.7
SMARCA4-216ENST00000591545 FHL1Q13642 323 aa10.71□□□□□ -0.7
SMARCA4-216ENST00000591545 GATD1Q8NB37 220 aa10.71□□□□□ -0.7
SMARCA4-216ENST00000591545 PRO3102Q9H379 93 aa10.71□□□□□ -0.7
SMARCA4-216ENST00000591545 LMO1P25800 156 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 TEX36Q5VZQ5 186 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 RNF144BQ7Z419 303 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 LIME1Q9H400 295 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 ATP6V0E1O15342 81 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 FCN3O75636 299 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 Q8TAT8 98 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 TIMM21Q9BVV7 248 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 DENND4CQ5VZ89 1909 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 FANCMQ8IYD8 2048 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 ERCC8Q13216 396 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 AMN1Q8IY45 258 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 SPANXDQ9BXN6 97 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 TRGV1A0A0A0MS02 117 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 GAGE12BA1L429 117 aa10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 YPEL3P61236 119 aaPredicted RBP10.7□□□□□ -0.7
SMARCA4-216ENST00000591545 FAM231DQ6ZW35 169 aa10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 A0A0U1RRA0 63 aa10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 PRSS46E5RG02 174 aa10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 TNFRSF6BO95407 300 aa10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 POLR3KQ9Y2Y1 108 aaPredicted RBP10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 PHF3Q92576 2039 aaKnown RBP10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 NUP210Q8TEM1 1887 aaPredicted RBP10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 TRPT1Q86TN4 253 aaKnown RBP10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 C14orf178Q8N769 122 aaPredicted RBP10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 TMEM141Q96I45 108 aa10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 NAA38Q9BRA0 125 aaKnown RBP10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 TMEM14BQ9NUH8 114 aa10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 C18orf32Q8TCD1 76 aa10.69□□□□□ -0.7
SMARCA4-216ENST00000591545 TRAV8-1A0A0A6YYK1 113 aa10.68□□□□□ -0.7
SMARCA4-216ENST00000591545 MMP23AO75900 390 aa10.68□□□□□ -0.7
SMARCA4-216ENST00000591545 GRNP28799 593 aaKnown RBP10.68□□□□□ -0.7
SMARCA4-216ENST00000591545 C10orf91Q5T1B1 145 aa10.68□□□□□ -0.7
SMARCA4-216ENST00000591545 UBE2E2Q96LR5 201 aa10.68□□□□□ -0.7
SMARCA4-216ENST00000591545 RHODO00212 210 aa10.68□□□□□ -0.7
SMARCA4-216ENST00000591545 TMEM249Q2WGJ8 235 aa10.68□□□□□ -0.7
SMARCA4-216ENST00000591545 C1orf122Q6ZSJ8 110 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms