RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, human

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-222	ENST00000590619		A0A087WYN8	130 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	C7orf71	A4D174	169 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	CRYM-AS1	A6NIL9	109 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	PMS2P5	A8MQ11	134 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	GGTLC3	B5MD39	225 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	MRPS12	O15235	138 aa	Known RBP	4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	MPDU1	O75352	247 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	CDS2	O95674	445 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	PGAM2	P15259	253 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	RNASE4	P34096	147 aa	Known RBP	4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	BTN1A1	Q13410	526 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	CIRBP	Q14011	172 aa	Known RBP	4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	TOR2A	Q5JU69	321 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	FAM122C	Q6P4D5	195 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	REG3G	Q6UW15	175 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	SPINK6	Q6UWN8	80 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	LGI3	Q8N145	548 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	OR10P1	Q8NGE3	313 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	RNASE11	Q8TAA1	199 aa	Known RBP	4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	LHFPL5	Q8TAF8	219 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	DPH3	Q96FX2	82 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	ODF3	Q96PU9	254 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	S100A14	Q9HCY8	104 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	KIF25-AS1	Q9Y6Z4	181 aa		4.04	□□□□□ -1.76
DNMT1-222	ENST00000590619	IGHV3-16	A0A0C4DH30	117 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	KLLN	B2CW77	178 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	S100A7	P31151	101 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	ERCC8	Q13216	396 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	DGAT2L7P	Q6IED9	249 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	SELENOH	Q8IZQ5	122 aa	Known RBP	4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	BPIFC	Q8NFQ6	507 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	RMI2	Q96E14	147 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	FAM19A4	Q96LR4	140 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	TMEM222	Q9H0R3	208 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	GTSF1L	Q9H1H1	148 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	DUSP21	Q9H596	190 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	SCN3B	Q9NY72	215 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	VAX2	Q9UIW0	290 aa		4.03	□□□□□ -1.76
DNMT1-222	ENST00000590619	IGHV1OR15-1	A0A075B7D0	117 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619		H3BTX0	84 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	RGS13	O14921	159 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	RGS10	O43665	173 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	PRSS1	P07477	247 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	CLEC2L	P0C7M8	214 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	GATA1	P15976	413 aa	Predicted RBP	4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	ANXA7	P20073	488 aa	Known RBP	4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	ATP5I	P56385	69 aa	Predicted RBP	4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	OPCML	Q14982	345 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	VWC2	Q2TAL6	325 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	C4orf46	Q504U0	113 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	C14orf177	Q52M58	125 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	GPR107	Q5VW38	600 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	PATE2	Q6UY27	113 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	ACOT7L	Q6ZUV0	252 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	OR4C5	Q8NGB2	326 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	OR1S1	Q8NH92	325 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	GLYATL2	Q8WU03	294 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	ZC2HC1A	Q96GY0	325 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	ZNF486	Q96H40	463 aa	Predicted RBP	4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	RBKS	Q9H477	322 aa		4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	TXNL4B	Q9NX01	149 aa	Known RBP	4.02	□□□□□ -1.77
DNMT1-222	ENST00000590619	TRAV4	A0A0B4J268	109 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	SLC17A3	O00476	420 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	HYPM	O75409	117 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	CXCL2	P19875	107 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	RCVRN	P35243	200 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	RAP2B	P61225	183 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	PRR3	P79522	188 aa	Known RBP	4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	PRR4	Q16378	134 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	LINC01559	Q495D7	138 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	SLC25A29	Q8N8R3	303 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	OR4D10	Q8NGI6	311 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	DTD1	Q8TEA8	209 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	NRG4	Q8WWG1	115 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	SAT2	Q96F10	170 aa	Predicted RBP	4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	C2orf50	Q96LR7	162 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	SLC50A1	Q9BRV3	221 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	AGPAT4-IT1	Q9H0P7	198 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	NDUFB11	Q9NX14	153 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	KLK12	Q9UKR0	248 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	SSR3	Q9UNL2	185 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	HIGD1A	Q9Y241	93 aa		4.01	□□□□□ -1.77
DNMT1-222	ENST00000590619	USP17L23	D6RBM5	183 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619		H7C1H1	209 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	GPX1	P07203	203 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	OR5G3	P0C626	314 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	CHTF8	P0CG12	524 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	SDC2	P34741	201 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	PRSS3	P35030	304 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	PLP1	P60201	277 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	PRR9	Q5T870	116 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	ATRAID	Q6UW56	229 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	LCN15	Q6UWW0	184 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	LHFPL1	Q86WI0	220 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	C7orf33	Q8WU49	177 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	GTSF1	Q8WW33	167 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	UBE2W	Q96B02	151 aa		4	□□□□□ -1.77
DNMT1-222	ENST00000590619	S100A16	Q96FQ6	103 aa	Known RBP	4	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms