RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 ZNF738Q8NE65 137 aa10.35□□□□□ -0.75
SF3A2-204ENST00000589118 UPK3BQ9BT76 320 aa10.35□□□□□ -0.75
SF3A2-204ENST00000589118 MRPS16Q9Y3D3 137 aaKnown RBP10.35□□□□□ -0.75
SF3A2-204ENST00000589118 C7orf66A4D0T2 115 aa10.34□□□□□ -0.75
SF3A2-204ENST00000589118 CCSO14618 274 aa10.34□□□□□ -0.75
SF3A2-204ENST00000589118 SNRPCP09234 159 aaKnown RBP10.34□□□□□ -0.75
SF3A2-204ENST00000589118 RNASE8Q8TDE3 154 aaKnown RBP10.34□□□□□ -0.75
SF3A2-204ENST00000589118 C16orf74Q96GX8 76 aa10.34□□□□□ -0.75
SF3A2-204ENST00000589118 C2orf50Q96LR7 162 aa10.34□□□□□ -0.75
SF3A2-204ENST00000589118 C11orf1Q9H5F2 150 aa10.34□□□□□ -0.75
SF3A2-204ENST00000589118 PGPEP1Q9NXJ5 209 aa10.34□□□□□ -0.75
SF3A2-204ENST00000589118 GSKIPQ9P0R6 139 aa10.34□□□□□ -0.75
SF3A2-204ENST00000589118 A0A1W2PPQ1 181 aa10.33□□□□□ -0.76
SF3A2-204ENST00000589118 K7EPK0 472 aa10.33□□□□□ -0.76
SF3A2-204ENST00000589118 SSNA1O43805 119 aa10.33□□□□□ -0.76
SF3A2-204ENST00000589118 SCGB1D2O95969 90 aa10.33□□□□□ -0.76
SF3A2-204ENST00000589118 B2MP61769 119 aa10.33□□□□□ -0.76
SF3A2-204ENST00000589118 OR10P1Q8NGE3 313 aa10.33□□□□□ -0.76
SF3A2-204ENST00000589118 OR8A1Q8NGG7 326 aa10.33□□□□□ -0.76
SF3A2-204ENST00000589118 OR1B1Q8NGR6 318 aa10.33□□□□□ -0.76
SF3A2-204ENST00000589118 GGACTQ9BVM4 153 aa10.33□□□□□ -0.76
SF3A2-204ENST00000589118 PPP1R14DQ9NXH3 145 aa10.33□□□□□ -0.76
SF3A2-204ENST00000589118 UBR4Q5T4S7 5183 aa10.33□□□□□ -0.76
SF3A2-204ENST00000589118 METTL15P1P0C7V9 234 aa10.32□□□□□ -0.76
SF3A2-204ENST00000589118 AKR1C1Q04828 323 aa10.32□□□□□ -0.76
SF3A2-204ENST00000589118 BPIFCQ8NFQ6 507 aa10.32□□□□□ -0.76
SF3A2-204ENST00000589118 VSIG2Q96IQ7 327 aa10.32□□□□□ -0.76
SF3A2-204ENST00000589118 NPVFQ9HCQ7 196 aa10.32□□□□□ -0.76
SF3A2-204ENST00000589118 A0A096LPF7 62 aa10.31□□□□□ -0.76
SF3A2-204ENST00000589118 C5orf51A6NDU8 294 aa10.31□□□□□ -0.76
SF3A2-204ENST00000589118 J3KRW8 73 aa10.31□□□□□ -0.76
SF3A2-204ENST00000589118 CCNKO75909 580 aa10.31□□□□□ -0.76
SF3A2-204ENST00000589118 PLP1P60201 277 aa10.31□□□□□ -0.76
SF3A2-204ENST00000589118 SELENOTP62341 195 aa10.31□□□□□ -0.76
SF3A2-204ENST00000589118 SAMD13Q5VXD3 122 aa10.31□□□□□ -0.76
SF3A2-204ENST00000589118 LINC00612Q8N6U2 182 aa10.31□□□□□ -0.76
SF3A2-204ENST00000589118 TMPRSS5Q9H3S3 457 aa10.31□□□□□ -0.76
SF3A2-204ENST00000589118 ALG5Q9Y673 324 aa10.31□□□□□ -0.76
SF3A2-204ENST00000589118 FAM25EA8MYX2 175 aa10.3□□□□□ -0.76
SF3A2-204ENST00000589118 J3QL48 77 aa10.3□□□□□ -0.76
SF3A2-204ENST00000589118 S100A7P31151 101 aa10.3□□□□□ -0.76
SF3A2-204ENST00000589118 TMEM256Q8N2U0 113 aa10.3□□□□□ -0.76
SF3A2-204ENST00000589118 TMEM263Q8WUH6 116 aaKnown RBP10.3□□□□□ -0.76
SF3A2-204ENST00000589118 ZNF503Q96F45 646 aa10.3□□□□□ -0.76
SF3A2-204ENST00000589118 L7N2F9 121 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 GOSR2O14653 212 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 CXCL3P19876 107 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 PVALBP20472 110 aaPredicted RBP10.29□□□□□ -0.76
SF3A2-204ENST00000589118 ERVFC1-1P60608 527 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 VAMP2P63027 116 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 ARL16Q0P5N6 197 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 ICAM4Q14773 271 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 PSG3Q16557 428 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 TEPPQ6URK8 271 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 ZNF493Q6ZR52 646 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 CYP2G1PQ6ZSU1 146 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 Q6ZTI0 123 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 OR10J6PQ8NGY7 276 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 GPR82Q96P67 336 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 TMEM147Q9BVK8 224 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 LYRM2Q9NU23 88 aaPredicted RBP10.29□□□□□ -0.76
SF3A2-204ENST00000589118 MGAT4CQ9UBM8 478 aa10.29□□□□□ -0.76
SF3A2-204ENST00000589118 LSM5Q9Y4Y9 91 aaKnown RBP10.29□□□□□ -0.76
SF3A2-204ENST00000589118 A0A087WTM6 91 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 SMCO3A2RU48 225 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 PRAC2D3DTV9 90 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 H3BRN7 92 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 SIVA1O15304 175 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 IFNA5P01569 189 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 CDKN1BP46527 198 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 RAB32Q13637 225 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 VWC2Q2TAL6 325 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 PXDC1Q5TGL8 231 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 RPUSD4Q96CM3 377 aaKnown RBP10.28□□□□□ -0.76
SF3A2-204ENST00000589118 NMES1Q9C002 83 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 MED28Q9H204 178 aa10.28□□□□□ -0.76
SF3A2-204ENST00000589118 H3BTX0 84 aa10.27□□□□□ -0.77
SF3A2-204ENST00000589118 EREGO14944 169 aa10.27□□□□□ -0.77
SF3A2-204ENST00000589118 RLN2P04090 185 aa10.27□□□□□ -0.77
SF3A2-204ENST00000589118 RRAS2P62070 204 aaPredicted RBP10.27□□□□□ -0.77
SF3A2-204ENST00000589118 GFI1BQ5VTD9 330 aa10.27□□□□□ -0.77
SF3A2-204ENST00000589118 SHANK2-AS3Q9BTD1 123 aa10.27□□□□□ -0.77
SF3A2-204ENST00000589118 DNAH8Q96JB1 4490 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 H7BYZ3 331 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 NXPH4O95158 308 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 LINC00869P0C866 280 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 SULT1A1P50225 295 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 CAV2P51636 162 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 CYCSP99999 105 aaKnown RBP10.26□□□□□ -0.77
SF3A2-204ENST00000589118 SLC38A11Q08AI6 406 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 S100A7AQ86SG5 101 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 ZNF546Q86UE3 836 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 TMEM252Q8N6L7 170 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 LRRC20Q8TCA0 184 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 CHAC2Q8WUX2 184 aa10.26□□□□□ -0.77
SF3A2-204ENST00000589118 TRAV12-3A0A0B4J271 114 aa10.25□□□□□ -0.77
SF3A2-204ENST00000589118 FAM24AA6NFZ4 105 aa10.25□□□□□ -0.77
SF3A2-204ENST00000589118 SNURFLB1AK76 121 aa10.25□□□□□ -0.77
SF3A2-204ENST00000589118 FAM229AH3BQW9 127 aa10.25□□□□□ -0.77
SF3A2-204ENST00000589118 AGPAT2O15120 278 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms