RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SGK494Q96LW2 274 aa11.46□□□□□ -0.57
CCDC43-203ENST00000588210 SSBP4Q9BWG4 385 aaPredicted RBP11.46□□□□□ -0.57
CCDC43-203ENST00000588210 OTORQ9NRC9 128 aa11.46□□□□□ -0.57
CCDC43-203ENST00000588210 IGHV3-21A0A0B4J1V1 117 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 M0R2Z0 102 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 P01737 135 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 IGLC1P0CG04 106 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 APELAP0DMC3 54 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 GAGE1Q13065 139 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 FAM162BQ5T6X4 162 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 LHFPL4Q7Z7J7 247 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 Q86TA4 180 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 KLHDC1Q8N7A1 406 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 KRTAP21-3Q3LHN1 58 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 MINOS1Q5TGZ0 78 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 RNASEKQ6P5S7 137 aaKnown RBP11.45□□□□□ -0.58
CCDC43-203ENST00000588210 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 SRSF12Q8WXF0 261 aaKnown RBP11.45□□□□□ -0.58
CCDC43-203ENST00000588210 AJUBAQ96IF1 538 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 SRSF8Q9BRL6 282 aaKnown RBP11.45□□□□□ -0.58
CCDC43-203ENST00000588210 TMEM208Q9BTX3 173 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 MINOS1-NBL1R4GNA1 71 aa11.45□□□□□ -0.58
CCDC43-203ENST00000588210 TRBV6-1A0A0K0K1D8 114 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 FAM231BA6NCW3 169 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 NPIPB6E9PJ23 425 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 I3L2K1 104 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 DLEU1O43261 78 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 PSG1P11464 419 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 LEMD1Q68G75 181 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 RNF5Q99942 180 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 WNT10AQ9GZT5 417 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 MEGF9Q9H1U4 602 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 ESM1Q9NQ30 184 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 BTF3P20290 206 aaKnown RBP11.44□□□□□ -0.58
CCDC43-203ENST00000588210 HTR1DP28221 377 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 LYZP61626 148 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 COL5A1-AS1Q5SY13 56 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 EBLN2Q6P2I7 272 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 RBPMS2Q6ZRY4 209 aaKnown RBP11.44□□□□□ -0.58
CCDC43-203ENST00000588210 TMEM86BQ8N661 226 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 OR2D3Q8NGH3 330 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 URB1-AS1Q96HZ7 61 aa11.44□□□□□ -0.58
CCDC43-203ENST00000588210 SLC25A39Q9BZJ4 359 aaPredicted RBP11.44□□□□□ -0.58
CCDC43-203ENST00000588210 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
CCDC43-203ENST00000588210 H3BTX0 84 aa11.43□□□□□ -0.58
CCDC43-203ENST00000588210 HOXA3O43365 443 aaPredicted RBP11.43□□□□□ -0.58
CCDC43-203ENST00000588210 RPEQ96AT9 228 aa11.43□□□□□ -0.58
CCDC43-203ENST00000588210 TXN2Q99757 166 aa11.43□□□□□ -0.58
CCDC43-203ENST00000588210 FBXL15Q9H469 300 aa11.43□□□□□ -0.58
CCDC43-203ENST00000588210 C20orf202A1L168 122 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 C2orf70A6NJV1 201 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 LY6LH3BQJ8 138 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 HNRNPA3P51991 378 aaKnown RBP11.42□□□□□ -0.58
CCDC43-203ENST00000588210 BATFQ16520 125 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 C16orf54Q6UWD8 224 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 Q6ZN92 141 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 DAZAP1Q96EP5 407 aaKnown RBP11.42□□□□□ -0.58
CCDC43-203ENST00000588210 RASL11BQ9BPW5 248 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 DPM3Q9P2X0 92 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 IGLV2-11P01706 119 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 CEACAM3P40198 252 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 LDLRAD2Q5SZI1 272 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 LCN12Q6JVE5 192 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 CHCHD1Q96BP2 118 aaKnown RBP11.42□□□□□ -0.58
CCDC43-203ENST00000588210 PGLYRP4Q96LB8 373 aa11.42□□□□□ -0.58
CCDC43-203ENST00000588210 TRAV9-2A0A087WT02 112 aa11.41□□□□□ -0.58
CCDC43-203ENST00000588210 SRSF2Q01130 221 aaKnown RBP11.41□□□□□ -0.58
CCDC43-203ENST00000588210 IGKV1-17P01599 117 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 RNASE1P07998 156 aaKnown RBP11.4□□□□□ -0.58
CCDC43-203ENST00000588210 ATOH7Q8N100 152 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 DYNAPQ8N1N2 210 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 DUX5Q96PT3 197 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 C1RLQ9NZP8 487 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 IGHV4-59P01825 116 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 TMEM158Q8WZ71 300 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 SHANK2-AS3Q9BTD1 123 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 RNF24Q9Y225 148 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 LAMTOR2Q9Y2Q5 125 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 GOLT1BQ9Y3E0 138 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 HILPDAQ9Y5L2 63 aa11.4□□□□□ -0.58
CCDC43-203ENST00000588210 TRAV8-1A0A0A6YYK1 113 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 OOSP1A8MZH6 123 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 H3BRN7 92 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 K7EIM0 57 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 HAX1O00165 279 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 APOHP02749 345 aaPredicted RBP11.39□□□□□ -0.59
CCDC43-203ENST00000588210 PLGLAQ15195 96 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 Q56UQ5 140 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 DMRTA1Q5VZB9 504 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 GOLT1AQ6ZVE7 132 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 EXOC3-AS1Q8N2X6 119 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 TMEM75Q8N9X5 138 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 TMEM70Q9BUB7 260 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 MRPS16Q9Y3D3 137 aaKnown RBP11.39□□□□□ -0.59
CCDC43-203ENST00000588210 LOC102724200A0A096LPH7 203 aaPredicted RBP11.39□□□□□ -0.59
CCDC43-203ENST00000588210 CRXO43186 299 aaPredicted RBP11.39□□□□□ -0.59
CCDC43-203ENST00000588210 FOXA3P55318 350 aaPredicted RBP11.39□□□□□ -0.59
CCDC43-203ENST00000588210 MAJINQ3KP22 176 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 PRNTQ86SH4 94 aa11.39□□□□□ -0.59
CCDC43-203ENST00000588210 NDFIP1Q9BT67 221 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms