RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 ANK3Q12955 4377 aaKnown RBP15.14■□□□□ 0.01
TRIM47-204ENST00000587339 IGHV4OR15-8A0A075B7B6 117 aa15.13■□□□□ 0.01
TRIM47-204ENST00000587339 A0A087WW49 117 aa15.13■□□□□ 0.01
TRIM47-204ENST00000587339 TRBV6-1A0A0K0K1D8 114 aa15.13■□□□□ 0.01
TRIM47-204ENST00000587339 CHEK1O14757 476 aa15.13■□□□□ 0.01
TRIM47-204ENST00000587339 HLA-DMBP28068 263 aa15.13■□□□□ 0.01
TRIM47-204ENST00000587339 FAM3BP58499 235 aaPredicted RBP15.13■□□□□ 0.01
TRIM47-204ENST00000587339 FOXL1Q12952 345 aa15.13■□□□□ 0.01
TRIM47-204ENST00000587339 CDX1P47902 265 aaPredicted RBP15.13■□□□□ 0.01
TRIM47-204ENST00000587339 LCN12Q6JVE5 192 aa15.13■□□□□ 0.01
TRIM47-204ENST00000587339 TMEM183AQ8IXX5 376 aa15.13■□□□□ 0.01
TRIM47-204ENST00000587339 PYGO2Q9BRQ0 406 aa15.13■□□□□ 0.01
TRIM47-204ENST00000587339 SMPXQ9UHP9 88 aa15.13■□□□□ 0.01
TRIM47-204ENST00000587339 PSG8Q9UQ74 426 aa15.13■□□□□ 0.01
TRIM47-204ENST00000587339 TCTEX1D4Q5JR98 221 aa15.12■□□□□ 0.01
TRIM47-204ENST00000587339 FAM231DQ6ZW35 169 aa15.12■□□□□ 0.01
TRIM47-204ENST00000587339 Q71RC1 249 aaPredicted RBP15.12■□□□□ 0.01
TRIM47-204ENST00000587339 BIN3Q9NQY0 253 aa15.12■□□□□ 0.01
TRIM47-204ENST00000587339 IL36BQ9NZH7 164 aa15.12■□□□□ 0.01
TRIM47-204ENST00000587339 ZFP30Q9Y2G7 519 aa15.12■□□□□ 0.01
TRIM47-204ENST00000587339 ZNF705FA8MVS1 300 aaPredicted RBP15.11■□□□□ 0.01
TRIM47-204ENST00000587339 C1orf196B1AJZ1 125 aa15.11■□□□□ 0.01
TRIM47-204ENST00000587339 KHDC1LQ5JSQ8 128 aa15.11■□□□□ 0.01
TRIM47-204ENST00000587339 RNF182Q8N6D2 247 aa15.11■□□□□ 0.01
TRIM47-204ENST00000587339 IGKV2-40A0A087WW87 121 aaPredicted RBP15.11■□□□□ 0.01
TRIM47-204ENST00000587339 ZNF705GA8MUZ8 300 aaPredicted RBP15.11■□□□□ 0.01
TRIM47-204ENST00000587339 IGKV2D-40P01614 121 aaPredicted RBP15.11■□□□□ 0.01
TRIM47-204ENST00000587339 HOXD3P31249 432 aaPredicted RBP15.11■□□□□ 0.01
TRIM47-204ENST00000587339 RPL11P62913 178 aaKnown RBP15.11■□□□□ 0.01
TRIM47-204ENST00000587339 SYNJ2BPP57105 145 aa15.1■□□□□ 0.01
TRIM47-204ENST00000587339 C18orf65Q6ZTR6 163 aa15.1■□□□□ 0.01
TRIM47-204ENST00000587339 C1QL4Q86Z23 238 aa15.1■□□□□ 0.01
TRIM47-204ENST00000587339 NUDT10Q8NFP7 164 aa15.1■□□□□ 0.01
TRIM47-204ENST00000587339 NUDT11Q96G61 164 aa15.1■□□□□ 0.01
TRIM47-204ENST00000587339 C16orf92Q96LL3 132 aa15.1■□□□□ 0.01
TRIM47-204ENST00000587339 JMJD8Q96S16 334 aa15.1■□□□□ 0.01
TRIM47-204ENST00000587339 TRAV8-2A0A0B4J237 113 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 FOSL1P15407 271 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 RAB5BP61020 215 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 REC114Q7Z4M0 266 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 C4orf3Q8WVX3 66 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 TMEM213A2RRL7 107 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 FBLL1A6NHQ2 334 aaKnown RBP15.09■□□□□ 0.01
TRIM47-204ENST00000587339 A8MWP6 167 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 LGALS9O00182 355 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 EDN2P20800 178 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 BMI1P35226 326 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 ZFP82Q8N141 532 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 BTF3L4Q96K17 158 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 C16orf95Q9H693 158 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 NRN1Q9NPD7 142 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 CLEC5AQ9NY25 188 aa15.09■□□□□ 0.01
TRIM47-204ENST00000587339 NF1P21359 2839 aa15.08■□□□□ 0.01
TRIM47-204ENST00000587339 GATCO43716 136 aaKnown RBP15.08■□□□□ 0
TRIM47-204ENST00000587339 DEFB136Q30KP8 78 aa15.08■□□□□ 0
TRIM47-204ENST00000587339 LINC01006Q8NI28 216 aa15.08■□□□□ 0
TRIM47-204ENST00000587339 INAFM1C9JVW0 142 aa15.07■□□□□ 0
TRIM47-204ENST00000587339 LINC00322Q6ZN03 302 aaPredicted RBP15.07■□□□□ 0
TRIM47-204ENST00000587339 WIPF2Q8TF74 440 aaPredicted RBP15.07■□□□□ 0
TRIM47-204ENST00000587339 MRPL53Q96EL3 112 aaKnown RBP15.07■□□□□ 0
TRIM47-204ENST00000587339 ASCL2Q99929 193 aa15.07■□□□□ 0
TRIM47-204ENST00000587339 KLHL30-AS1Q8NEE0 82 aa15.07■□□□□ 0
TRIM47-204ENST00000587339 OR11H1Q8NG94 326 aa15.07■□□□□ 0
TRIM47-204ENST00000587339 DAZAP1Q96EP5 407 aaKnown RBP15.07■□□□□ 0
TRIM47-204ENST00000587339 VGLL1Q99990 258 aa15.07■□□□□ 0
TRIM47-204ENST00000587339 SRD5A3Q9H8P0 318 aa15.07■□□□□ 0
TRIM47-204ENST00000587339 ZNF492Q9P255 531 aa15.07■□□□□ 0
TRIM47-204ENST00000587339 CA1P00915 261 aaPredicted RBP15.06■□□□□ 0
TRIM47-204ENST00000587339 GBGT1Q8N5D6 347 aa15.06■□□□□ 0
TRIM47-204ENST00000587339 IGKV3-7A0A075B6H7 116 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 TRAV9-1A0A075B6T8 112 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 RBAKDNA6NC62 111 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 C19orf71A6NCJ1 209 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 PRAC2D3DTV9 90 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 LINC01619G3V211 115 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 P01737 135 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 TYMSP04818 313 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 KLF5Q13887 457 aaPredicted RBP15.05■□□□□ 0
TRIM47-204ENST00000587339 SAPCD1Q5SSQ6 148 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 TCF24Q7RTU0 167 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 DPF1Q92782 380 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 ZC2HC1AQ96GY0 325 aa15.05■□□□□ 0
TRIM47-204ENST00000587339 SOCS3O14543 225 aa15.05■□□□□ -0
TRIM47-204ENST00000587339 TRGC2P03986 189 aa15.05■□□□□ -0
TRIM47-204ENST00000587339 WFDC12Q8WWY7 111 aa15.05■□□□□ -0
TRIM47-204ENST00000587339 SELENOKQ9Y6D0 94 aa15.05■□□□□ -0
TRIM47-204ENST00000587339 SMIM27A0A1W2PRY6 76 aa15.04■□□□□ -0
TRIM47-204ENST00000587339 SLURP1P55000 103 aa15.04■□□□□ -0
TRIM47-204ENST00000587339 OR1N2Q8NGR9 330 aa15.04■□□□□ -0
TRIM47-204ENST00000587339 Q8TAT8 98 aa15.04■□□□□ -0
TRIM47-204ENST00000587339 PRR25Q96S07 402 aa15.04■□□□□ -0
TRIM47-204ENST00000587339 CT45A10P0DMU9 189 aa15.04■□□□□ -0
TRIM47-204ENST00000587339 TCL1AP56279 114 aa15.04■□□□□ -0
TRIM47-204ENST00000587339 C11orf44Q8N8P7 122 aa15.04■□□□□ -0
TRIM47-204ENST00000587339 C8orf49Q96NF6 230 aa15.04■□□□□ -0
TRIM47-204ENST00000587339 RPP21Q9H633 154 aaKnown RBP15.04■□□□□ -0
TRIM47-204ENST00000587339 HAX1O00165 279 aa15.03■□□□□ -0
TRIM47-204ENST00000587339 CBLN1P23435 193 aa15.03■□□□□ -0
TRIM47-204ENST00000587339 ERCC8Q13216 396 aa15.03■□□□□ -0
TRIM47-204ENST00000587339 HIST2H2BDQ6DRA6 164 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms