RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 HLA-DMBP28068 263 aa10.29□□□□□ -0.76
TPM4-205ENST00000586833 DEFB1P60022 68 aa10.29□□□□□ -0.76
TPM4-205ENST00000586833 RAB2AP61019 212 aa10.29□□□□□ -0.76
TPM4-205ENST00000586833 TCTE3Q8IZS6 198 aa10.29□□□□□ -0.76
TPM4-205ENST00000586833 IGF2BP2-AS1Q96M15 143 aa10.29□□□□□ -0.76
TPM4-205ENST00000586833 C11orf68Q9H3H3 251 aaKnown RBP10.29□□□□□ -0.76
TPM4-205ENST00000586833 HUWE1Q7Z6Z7 4374 aaKnown RBP10.28□□□□□ -0.76
TPM4-205ENST00000586833 A0A0J9YWU9 116 aa10.28□□□□□ -0.76
TPM4-205ENST00000586833 ZNF705EA8MWA4 302 aaPredicted RBP10.28□□□□□ -0.76
TPM4-205ENST00000586833 GIG44P09565 113 aaPredicted RBP10.28□□□□□ -0.76
TPM4-205ENST00000586833 LEPP41159 167 aa10.28□□□□□ -0.76
TPM4-205ENST00000586833 FXYD7P58549 80 aa10.28□□□□□ -0.76
TPM4-205ENST00000586833 AKAP14Q86UN6 197 aa10.28□□□□□ -0.76
TPM4-205ENST00000586833 CMTM2Q8TAZ6 248 aa10.28□□□□□ -0.76
TPM4-205ENST00000586833 RXFP4Q8TDU9 374 aa10.28□□□□□ -0.76
TPM4-205ENST00000586833 FXYD5Q96DB9 178 aa10.28□□□□□ -0.76
TPM4-205ENST00000586833 SLC35B3Q9H1N7 401 aa10.28□□□□□ -0.76
TPM4-205ENST00000586833 TMEM189A5PLL7 270 aa10.27□□□□□ -0.77
TPM4-205ENST00000586833 BCL2L11O43521 198 aa10.27□□□□□ -0.77
TPM4-205ENST00000586833 HBE1P02100 147 aa10.27□□□□□ -0.77
TPM4-205ENST00000586833 CDKN1BP46527 198 aa10.27□□□□□ -0.77
TPM4-205ENST00000586833 ICAM4Q14773 271 aa10.27□□□□□ -0.77
TPM4-205ENST00000586833 CSNK1G2-AS1Q8NCQ2 148 aa10.27□□□□□ -0.77
TPM4-205ENST00000586833 LINC00477Q96M19 166 aa10.27□□□□□ -0.77
TPM4-205ENST00000586833 ODF3Q96PU9 254 aa10.27□□□□□ -0.77
TPM4-205ENST00000586833 NEU1Q99519 415 aa10.27□□□□□ -0.77
TPM4-205ENST00000586833 ZNF471Q9BX82 626 aaPredicted RBP10.27□□□□□ -0.77
TPM4-205ENST00000586833 SH3BGRL3Q9H299 93 aa10.27□□□□□ -0.77
TPM4-205ENST00000586833 TMEM167BQ9NRX6 74 aa10.27□□□□□ -0.77
TPM4-205ENST00000586833 IGHV3OR16-12A0A075B7B8 117 aa10.26□□□□□ -0.77
TPM4-205ENST00000586833 ZNF705FA8MVS1 300 aaPredicted RBP10.26□□□□□ -0.77
TPM4-205ENST00000586833 NDUFB4O95168 129 aa10.26□□□□□ -0.77
TPM4-205ENST00000586833 CXorf1O96002 111 aa10.26□□□□□ -0.77
TPM4-205ENST00000586833 ZNF705DP0CH99 300 aaPredicted RBP10.26□□□□□ -0.77
TPM4-205ENST00000586833 ZNF705BP0CI00 300 aaPredicted RBP10.26□□□□□ -0.77
TPM4-205ENST00000586833 RANP62826 216 aaKnown RBP10.26□□□□□ -0.77
TPM4-205ENST00000586833 SPINK13Q1W4C9 94 aa10.26□□□□□ -0.77
TPM4-205ENST00000586833 TMEM78Q5T7P6 136 aa10.26□□□□□ -0.77
TPM4-205ENST00000586833 EIF5AL1Q6IS14 154 aaKnown RBP10.26□□□□□ -0.77
TPM4-205ENST00000586833 TMEM256Q8N2U0 113 aa10.26□□□□□ -0.77
TPM4-205ENST00000586833 RAB24Q969Q5 203 aa10.26□□□□□ -0.77
TPM4-205ENST00000586833 RFNGQ9Y644 331 aa10.26□□□□□ -0.77
TPM4-205ENST00000586833 TEX48A0A1B0GUV7 120 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 STAG3L2P0CL84 134 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 STAG3L3P0CL85 134 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 TPT1P13693 172 aaKnown RBP10.25□□□□□ -0.77
TPM4-205ENST00000586833 AMTNQ6UX39 209 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 ZNF705AQ6ZN79 300 aaPredicted RBP10.25□□□□□ -0.77
TPM4-205ENST00000586833 EXOC3-AS1Q8N2X6 119 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 RPP25LQ8N5L8 163 aaKnown RBP10.25□□□□□ -0.77
TPM4-205ENST00000586833 ARL6IP6Q8N6S5 226 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 STOML3Q8TAV4 291 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 C11orf45Q8TAV5 145 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 HYLS1Q96M11 299 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 C20orf144Q9BQM9 153 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 Q9H3A6 140 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 OTORQ9NRC9 128 aa10.25□□□□□ -0.77
TPM4-205ENST00000586833 hCG_2014768A0A024R1R8 64 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 IGHV4-28A0A0C4DH34 117 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 CTXND1A0A1B0GTU2 59 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 CXorf65A6NEN9 183 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 UMAD1C9J7I0 102 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 NPIPB6E9PJ23 425 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 M0R2Z0 102 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 M0R3E3 92 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 SEC11BP0C7V7 166 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 RRN3P1Q2M238 152 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 TMUB2Q71RG4 321 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 IQCF2Q8IXL9 164 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 OR11H4Q8NGC9 324 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 PHYHIPLQ96FC7 376 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 ST6GAL2Q96JF0 529 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 CYTL1Q9NRR1 136 aa10.24□□□□□ -0.77
TPM4-205ENST00000586833 SERTM2A0A1B0GWG4 89 aa10.23□□□□□ -0.77
TPM4-205ENST00000586833 RBAKDNA6NC62 111 aa10.23□□□□□ -0.77
TPM4-205ENST00000586833 PRAC2D3DTV9 90 aa10.23□□□□□ -0.77
TPM4-205ENST00000586833 K7EQM0 130 aa10.23□□□□□ -0.77
TPM4-205ENST00000586833 HMGB3O15347 200 aaKnown RBP10.23□□□□□ -0.77
TPM4-205ENST00000586833 C1QBP02746 253 aa10.23□□□□□ -0.77
TPM4-205ENST00000586833 SLC25A5P05141 298 aaKnown RBP10.23□□□□□ -0.77
TPM4-205ENST00000586833 ARL14EPLP0DKL9 152 aa10.23□□□□□ -0.77
TPM4-205ENST00000586833 Q8NAQ8 132 aa10.23□□□□□ -0.77
TPM4-205ENST00000586833 ZNF503Q96F45 646 aa10.23□□□□□ -0.77
TPM4-205ENST00000586833 LINC01587Q99440 93 aa10.23□□□□□ -0.77
TPM4-205ENST00000586833 X6R8D5 127 aa10.23□□□□□ -0.77
TPM4-205ENST00000586833 PGPA6NDG6 321 aa10.22□□□□□ -0.77
TPM4-205ENST00000586833 NUPR2A6NF83 97 aa10.22□□□□□ -0.77
TPM4-205ENST00000586833 GCHFRP30047 84 aa10.22□□□□□ -0.77
TPM4-205ENST00000586833 ZFAND6Q6FIF0 208 aa10.22□□□□□ -0.77
TPM4-205ENST00000586833 DPPA3Q6W0C5 159 aa10.22□□□□□ -0.77
TPM4-205ENST00000586833 C9orf47Q6ZRZ4 202 aa10.22□□□□□ -0.77
TPM4-205ENST00000586833 CCDC28AQ8IWP9 274 aa10.22□□□□□ -0.77
TPM4-205ENST00000586833 BAP18Q8IXM2 172 aa10.22□□□□□ -0.77
TPM4-205ENST00000586833 NIPSNAP3BQ9BS92 247 aa10.22□□□□□ -0.77
TPM4-205ENST00000586833 KLK5Q9Y337 293 aaPredicted RBP10.22□□□□□ -0.77
TPM4-205ENST00000586833 TRBV7-9A0A0J9YWB2 115 aa10.21□□□□□ -0.77
TPM4-205ENST00000586833 H7BYZ3 331 aa10.21□□□□□ -0.77
TPM4-205ENST00000586833 NMBP08949 121 aa10.21□□□□□ -0.77
TPM4-205ENST00000586833 TAS2R60P59551 318 aa10.21□□□□□ -0.77
TPM4-205ENST00000586833 CASC10Q5T4H9 136 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms