RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 NDUFA4O00483 81 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 CT45A10P0DMU9 189 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 IGHV4-31P0DP07 118 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 CRISP2P16562 243 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 ARL3P36405 182 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 Q5PR19 223 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 SAPCD1Q5SSQ6 148 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 GFI1BQ5VTD9 330 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 BCL6BQ8N143 479 aaPredicted RBP8.71□□□□□ -1.02
LIG3-204ENST00000585740 NUP35Q8NFH5 326 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 OR10D4PQ8NGN7 298 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 MRPL53Q96EL3 112 aaKnown RBP8.71□□□□□ -1.02
LIG3-204ENST00000585740 SGK494Q96LW2 274 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 NEU1Q99519 415 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 U3KQE9 123 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 CR1P17927 2039 aa8.71□□□□□ -1.02
LIG3-204ENST00000585740 PRRC2AP48634 2157 aaKnown RBP8.71□□□□□ -1.02
LIG3-204ENST00000585740 TRAV8-1A0A0A6YYK1 113 aa8.7□□□□□ -1.02
LIG3-204ENST00000585740 CLPSL1A2RUU4 121 aa8.7□□□□□ -1.02
LIG3-204ENST00000585740 FSHBP01225 129 aa8.7□□□□□ -1.02
LIG3-204ENST00000585740 FABP4P15090 132 aa8.7□□□□□ -1.02
LIG3-204ENST00000585740 RAB4BP61018 213 aa8.7□□□□□ -1.02
LIG3-204ENST00000585740 Q0VG73 95 aa8.7□□□□□ -1.02
LIG3-204ENST00000585740 DEFB112Q30KQ8 113 aa8.7□□□□□ -1.02
LIG3-204ENST00000585740 MRPL54Q6P161 138 aaKnown RBP8.7□□□□□ -1.02
LIG3-204ENST00000585740 C16orf54Q6UWD8 224 aa8.7□□□□□ -1.02
LIG3-204ENST00000585740 COX8CQ7Z4L0 72 aa8.7□□□□□ -1.02
LIG3-204ENST00000585740 CIARTQ8N365 385 aaPredicted RBP8.7□□□□□ -1.02
LIG3-204ENST00000585740 PACRGQ96M98 296 aaPredicted RBP8.7□□□□□ -1.02
LIG3-204ENST00000585740 HIST1H2BLQ99880 126 aa8.7□□□□□ -1.02
LIG3-204ENST00000585740 SMAD5-AS1Q9Y6J3 95 aa8.7□□□□□ -1.02
LIG3-204ENST00000585740 ACANP16112 2415 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 RBAKDNA6NC62 111 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 HIGD1CA8MV81 97 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 M0R3E3 92 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 CHEK1O14757 476 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 CA1P00915 261 aaPredicted RBP8.69□□□□□ -1.02
LIG3-204ENST00000585740 IGLV1-40P01703 118 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 APCSP02743 223 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 PF4V1P10720 104 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 PDZD11Q5EBL8 140 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 Q6AWC8 147 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 CYB5R2Q6BCY4 276 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 RBPMS2Q6ZRY4 209 aaKnown RBP8.69□□□□□ -1.02
LIG3-204ENST00000585740 NDFIP1Q9BT67 221 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 NIT2Q9NQR4 276 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 LINC00527Q9UJ94 153 aa8.69□□□□□ -1.02
LIG3-204ENST00000585740 MAP1AP78559 2803 aaPredicted RBP8.68□□□□□ -1.02
LIG3-204ENST00000585740 IGHV3-35A0A0C4DH35 117 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 A0A1B0GXF2 115 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 A0A1W2PS18 150 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 SPINK4O60575 86 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 AMBPP02760 352 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 ESDP10768 282 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 FOXA3P55318 350 aaPredicted RBP8.68□□□□□ -1.02
LIG3-204ENST00000585740 RPS20P60866 119 aaKnown RBP8.68□□□□□ -1.02
LIG3-204ENST00000585740 BLCAPP62952 87 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 PAFAH1B2P68402 229 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 HBBP68871 147 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 CFHR3Q02985 330 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 OR10J3Q5JRS4 329 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 LINC00322Q6ZN03 302 aaPredicted RBP8.68□□□□□ -1.02
LIG3-204ENST00000585740 OR2D3Q8NGH3 330 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 ZC2HC1AQ96GY0 325 aa8.68□□□□□ -1.02
LIG3-204ENST00000585740 A0A1B0GW15 77 aa8.67□□□□□ -1.02
LIG3-204ENST00000585740 IGHV4-59P01825 116 aa8.67□□□□□ -1.02
LIG3-204ENST00000585740 BMI1P35226 326 aa8.67□□□□□ -1.02
LIG3-204ENST00000585740 SLC35B1P78383 322 aa8.67□□□□□ -1.02
LIG3-204ENST00000585740 SRSF2Q01130 221 aaKnown RBP8.67□□□□□ -1.02
LIG3-204ENST00000585740 RIGQ13278 110 aa8.67□□□□□ -1.02
LIG3-204ENST00000585740 LCN12Q6JVE5 192 aa8.67□□□□□ -1.02
LIG3-204ENST00000585740 Q6YL49 198 aa8.67□□□□□ -1.02
LIG3-204ENST00000585740 OR4X2Q8NGF9 303 aa8.67□□□□□ -1.02
LIG3-204ENST00000585740 NOL4LQ96MY1 436 aaPredicted RBP8.67□□□□□ -1.02
LIG3-204ENST00000585740 MDFIQ99750 246 aa8.67□□□□□ -1.02
LIG3-204ENST00000585740 FOXC2Q99958 501 aa8.67□□□□□ -1.02
LIG3-204ENST00000585740 VPREB3Q9UKI3 123 aa8.67□□□□□ -1.02
LIG3-204ENST00000585740 IGHV3OR16-8A0A075B7F1 116 aa8.66□□□□□ -1.02
LIG3-204ENST00000585740 IGHG4P01861 327 aa8.66□□□□□ -1.02
LIG3-204ENST00000585740 PYY3Q5JQD4 70 aa8.66□□□□□ -1.02
LIG3-204ENST00000585740 FAM162BQ5T6X4 162 aa8.66□□□□□ -1.02
LIG3-204ENST00000585740 TCF24Q7RTU0 167 aa8.66□□□□□ -1.02
LIG3-204ENST00000585740 BAGE3Q86Y29 109 aa8.66□□□□□ -1.02
LIG3-204ENST00000585740 BORCS7Q96B45 105 aa8.66□□□□□ -1.02
LIG3-204ENST00000585740 Q96MF0 132 aa8.66□□□□□ -1.02
LIG3-204ENST00000585740 PRR25Q96S07 402 aa8.66□□□□□ -1.02
LIG3-204ENST00000585740 NPFFR1Q9GZQ6 430 aa8.66□□□□□ -1.02
LIG3-204ENST00000585740 PRDM13Q9H4Q3 707 aa8.66□□□□□ -1.02
LIG3-204ENST00000585740 IGKV2-40A0A087WW87 121 aaPredicted RBP8.65□□□□□ -1.02
LIG3-204ENST00000585740 GRIFINA4D1Z8 144 aa8.65□□□□□ -1.02
LIG3-204ENST00000585740 IGKV2D-40P01614 121 aaPredicted RBP8.65□□□□□ -1.02
LIG3-204ENST00000585740 FRMD6-AS1P0C7T7 363 aa8.65□□□□□ -1.02
LIG3-204ENST00000585740 JOSD1Q15040 202 aaPredicted RBP8.65□□□□□ -1.02
LIG3-204ENST00000585740 Q71RC1 249 aaPredicted RBP8.65□□□□□ -1.02
LIG3-204ENST00000585740 MAPK1IP1LQ8NDC0 245 aa8.65□□□□□ -1.02
LIG3-204ENST00000585740 GLMPQ8WWB7 406 aa8.65□□□□□ -1.02
LIG3-204ENST00000585740 PGLYRP4Q96LB8 373 aa8.65□□□□□ -1.02
LIG3-204ENST00000585740 PEF1Q9UBV8 284 aaKnown RBP8.65□□□□□ -1.02
LIG3-204ENST00000585740 A0A1B0GUT8 65 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms