RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 ADAMTSL5Q6ZMM2 481 aa10.59□□□□□ -0.71
UBBP4-202ENST00000584755 TMEM75Q8N9X5 138 aa10.59□□□□□ -0.71
UBBP4-202ENST00000584755 ISOC2Q96AB3 205 aa10.59□□□□□ -0.71
UBBP4-202ENST00000584755 SMIM12Q96EX1 92 aa10.59□□□□□ -0.71
UBBP4-202ENST00000584755 NRN1Q9NPD7 142 aa10.59□□□□□ -0.71
UBBP4-202ENST00000584755 TRAV34A0A0B4J273 112 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 K7EN84 100 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 CCL24O00175 119 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 CSN1S1P47710 185 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 UBE2G1P62253 170 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 BTN1A1Q13410 526 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 GOLT1AQ6ZVE7 132 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 TCF24Q7RTU0 167 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 OR9G4Q8NGQ1 327 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 DLX4Q92988 240 aaPredicted RBP10.58□□□□□ -0.72
UBBP4-202ENST00000584755 DUX3Q96PT4 197 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 TMEM242Q9NWH2 141 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 PEMTQ9UBM1 199 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 RPH3ALQ9UNE2 315 aa10.58□□□□□ -0.72
UBBP4-202ENST00000584755 K7EQM0 130 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 LTAP01374 205 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 FOLR2P14207 255 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 HLA-DMBP28068 263 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 FOXL1Q12952 345 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 SAMD13Q5VXD3 122 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 IGFL4Q6B9Z1 124 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 LCN12Q6JVE5 192 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 MLST8Q9BVC4 326 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 CTDSP1Q9GZU7 261 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 TUBA4BQ9H853 241 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 MLXQ9UH92 298 aa10.57□□□□□ -0.72
UBBP4-202ENST00000584755 A0A1W2PRX2 142 aa10.56□□□□□ -0.72
UBBP4-202ENST00000584755 FBLL1A6NHQ2 334 aaKnown RBP10.56□□□□□ -0.72
UBBP4-202ENST00000584755 GCGP01275 180 aa10.56□□□□□ -0.72
UBBP4-202ENST00000584755 PSG3Q16557 428 aa10.56□□□□□ -0.72
UBBP4-202ENST00000584755 RNF212Q495C1 297 aa10.56□□□□□ -0.72
UBBP4-202ENST00000584755 Q86TA4 180 aa10.56□□□□□ -0.72
UBBP4-202ENST00000584755 BAGE2Q86Y30 109 aa10.56□□□□□ -0.72
UBBP4-202ENST00000584755 NDUFA11Q86Y39 141 aa10.56□□□□□ -0.72
UBBP4-202ENST00000584755 CBLN2Q8IUK8 224 aa10.56□□□□□ -0.72
UBBP4-202ENST00000584755 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.56□□□□□ -0.72
UBBP4-202ENST00000584755 C16orf92Q96LL3 132 aa10.56□□□□□ -0.72
UBBP4-202ENST00000584755 SMCO4Q9NRQ5 59 aa10.56□□□□□ -0.72
UBBP4-202ENST00000584755 AURKAIP1Q9NWT8 199 aaPredicted RBP10.56□□□□□ -0.72
UBBP4-202ENST00000584755 NIPBLQ6KC79 2804 aaeCLIP10.56□□□□□ -0.72
UBBP4-202ENST00000584755 TRAV8-1A0A0A6YYK1 113 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 RBAKDNA6NC62 111 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 MT-ND4LP03901 98 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 CSN3P07498 182 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 FLI1Q01543 452 aaPredicted RBP10.55□□□□□ -0.72
UBBP4-202ENST00000584755 TMEM88Q6PEY1 159 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 RNF182Q8N6D2 247 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 DCANP1Q8TF63 244 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 ANAPC16Q96DE5 110 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 CXorf65A6NEN9 183 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 ZNF705FA8MVS1 300 aaPredicted RBP10.55□□□□□ -0.72
UBBP4-202ENST00000584755 M0QZ24 198 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 SFRP2Q96HF1 295 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 SGK494Q96LW2 274 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 SIGLEC8Q9NYZ4 499 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 PSG8Q9UQ74 426 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 ZFP30Q9Y2G7 519 aa10.55□□□□□ -0.72
UBBP4-202ENST00000584755 IGKV2-40A0A087WW87 121 aaPredicted RBP10.54□□□□□ -0.72
UBBP4-202ENST00000584755 PRAC2D3DTV9 90 aa10.54□□□□□ -0.72
UBBP4-202ENST00000584755 IGKV2D-40P01614 121 aaPredicted RBP10.54□□□□□ -0.72
UBBP4-202ENST00000584755 RPL11P62913 178 aaKnown RBP10.54□□□□□ -0.72
UBBP4-202ENST00000584755 COX8CQ7Z4L0 72 aa10.54□□□□□ -0.72
UBBP4-202ENST00000584755 TMEM183AQ8IXX5 376 aa10.54□□□□□ -0.72
UBBP4-202ENST00000584755 C20orf173Q96LM9 149 aa10.54□□□□□ -0.72
UBBP4-202ENST00000584755 MAST4O15021 2626 aa10.53□□□□□ -0.72
UBBP4-202ENST00000584755 PPP1R2P9O14990 202 aa10.53□□□□□ -0.72
UBBP4-202ENST00000584755 OR5I1Q13606 314 aa10.53□□□□□ -0.72
UBBP4-202ENST00000584755 FAM231DQ6ZW35 169 aa10.53□□□□□ -0.72
UBBP4-202ENST00000584755 YPEL4Q96NS1 127 aa10.53□□□□□ -0.72
UBBP4-202ENST00000584755 MS4A6AQ9H2W1 248 aa10.53□□□□□ -0.72
UBBP4-202ENST00000584755 OSTCQ9NRP0 149 aa10.53□□□□□ -0.72
UBBP4-202ENST00000584755 JMJD1CQ15652 2540 aa10.52□□□□□ -0.72
UBBP4-202ENST00000584755 TEP1Q99973 2627 aaKnown RBP10.52□□□□□ -0.73
UBBP4-202ENST00000584755 K7EQG2 157 aa10.52□□□□□ -0.73
UBBP4-202ENST00000584755 OVOL1O14753 267 aa10.52□□□□□ -0.73
UBBP4-202ENST00000584755 PRNTQ86SH4 94 aa10.52□□□□□ -0.73
UBBP4-202ENST00000584755 NHLRC2Q8NBF2 726 aa10.52□□□□□ -0.73
UBBP4-202ENST00000584755 VGLL1Q99990 258 aa10.52□□□□□ -0.73
UBBP4-202ENST00000584755 PPP1R14DQ9NXH3 145 aa10.52□□□□□ -0.73
UBBP4-202ENST00000584755 TRAV2A0A0B4J234 112 aa10.51□□□□□ -0.73
UBBP4-202ENST00000584755 H7BYZ3 331 aa10.51□□□□□ -0.73
UBBP4-202ENST00000584755 MGST1P10620 155 aaKnown RBP10.51□□□□□ -0.73
UBBP4-202ENST00000584755 ID1P41134 155 aa10.51□□□□□ -0.73
UBBP4-202ENST00000584755 NSUN5P1Q3KNT7 163 aa10.51□□□□□ -0.73
UBBP4-202ENST00000584755 C9orf47Q6ZRZ4 202 aa10.51□□□□□ -0.73
UBBP4-202ENST00000584755 OR10G8Q8NGN5 311 aa10.51□□□□□ -0.73
UBBP4-202ENST00000584755 BIN3Q9NQY0 253 aa10.51□□□□□ -0.73
UBBP4-202ENST00000584755 ZNF492Q9P255 531 aa10.51□□□□□ -0.73
UBBP4-202ENST00000584755 SELENOKQ9Y6D0 94 aa10.51□□□□□ -0.73
UBBP4-202ENST00000584755 IGKV3-7A0A075B6H7 116 aa10.5□□□□□ -0.73
UBBP4-202ENST00000584755 PRB4P10163 310 aaPredicted RBP10.5□□□□□ -0.73
UBBP4-202ENST00000584755 DEFB114Q30KQ6 69 aa10.5□□□□□ -0.73
UBBP4-202ENST00000584755 SAPCD1Q5SSQ6 148 aa10.5□□□□□ -0.73
UBBP4-202ENST00000584755 C15orf54Q8N8G6 183 aa10.5□□□□□ -0.73
UBBP4-202ENST00000584755 PRR25Q96S07 402 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms