RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TAGLN2P37802 199 aaKnown RBP13.63□□□□□ -0.23
RFFL-211ENST00000584541 SUMO1P63165 101 aaKnown RBP13.63□□□□□ -0.23
RFFL-211ENST00000584541 PMS2P11Q13670 270 aa13.63□□□□□ -0.23
RFFL-211ENST00000584541 EBLN2Q6P2I7 272 aa13.63□□□□□ -0.23
RFFL-211ENST00000584541 RPUSD4Q96CM3 377 aaKnown RBP13.63□□□□□ -0.23
RFFL-211ENST00000584541 YTHDF2Q9Y5A9 579 aaKnown RBP13.63□□□□□ -0.23
RFFL-211ENST00000584541 RGS13O14921 159 aa13.62□□□□□ -0.23
RFFL-211ENST00000584541 CLLU1Q5K131 121 aa13.62□□□□□ -0.23
RFFL-211ENST00000584541 C5orf17Q8NAS9 161 aa13.62□□□□□ -0.23
RFFL-211ENST00000584541 PKD1L1Q8TDX9 2849 aa13.61□□□□□ -0.23
RFFL-211ENST00000584541 ZNF705FA8MVS1 300 aaPredicted RBP13.61□□□□□ -0.23
RFFL-211ENST00000584541 GGTLC3B5MD39 225 aa13.61□□□□□ -0.23
RFFL-211ENST00000584541 M0R3E3 92 aa13.61□□□□□ -0.23
RFFL-211ENST00000584541 HAGHQ16775 308 aa13.61□□□□□ -0.23
RFFL-211ENST00000584541 FOXI2Q6ZQN5 318 aa13.61□□□□□ -0.23
RFFL-211ENST00000584541 APRG1Q8IVJ8 170 aa13.61□□□□□ -0.23
RFFL-211ENST00000584541 ARL6IP6Q8N6S5 226 aa13.61□□□□□ -0.23
RFFL-211ENST00000584541 TXNDC17Q9BRA2 123 aa13.61□□□□□ -0.23
RFFL-211ENST00000584541 C19orf73Q9NVV2 129 aa13.61□□□□□ -0.23
RFFL-211ENST00000584541 C11orf94C9JXX5 98 aa13.6□□□□□ -0.23
RFFL-211ENST00000584541 BCL2P10415 239 aa13.6□□□□□ -0.23
RFFL-211ENST00000584541 Q8N1Y9 231 aa13.6□□□□□ -0.23
RFFL-211ENST00000584541 OR10J6PQ8NGY7 276 aa13.6□□□□□ -0.23
RFFL-211ENST00000584541 TCEAL7Q9BRU2 100 aa13.6□□□□□ -0.23
RFFL-211ENST00000584541 VAX2Q9UIW0 290 aa13.6□□□□□ -0.23
RFFL-211ENST00000584541 RPH3ALQ9UNE2 315 aa13.6□□□□□ -0.23
RFFL-211ENST00000584541 F6UZH7 168 aa13.59□□□□□ -0.23
RFFL-211ENST00000584541 K7EQM0 130 aa13.59□□□□□ -0.23
RFFL-211ENST00000584541 ATP5G3P48201 142 aa13.59□□□□□ -0.23
RFFL-211ENST00000584541 ACTL10Q5JWF8 245 aa13.59□□□□□ -0.23
RFFL-211ENST00000584541 STHQ8IWL8 128 aa13.59□□□□□ -0.23
RFFL-211ENST00000584541 DEFB125Q8N687 156 aa13.59□□□□□ -0.23
RFFL-211ENST00000584541 WFDC10AQ9H1F0 79 aa13.59□□□□□ -0.23
RFFL-211ENST00000584541 SAV1Q9H4B6 383 aaPredicted RBP13.59□□□□□ -0.23
RFFL-211ENST00000584541 SERTM2A0A1B0GWG4 89 aa13.58□□□□□ -0.24
RFFL-211ENST00000584541 RBFOX3A6NFN3 312 aa13.58□□□□□ -0.24
RFFL-211ENST00000584541 KNCNA6PVL3 124 aa13.58□□□□□ -0.24
RFFL-211ENST00000584541 DIRC3C9JPN6 131 aa13.58□□□□□ -0.24
RFFL-211ENST00000584541 DUSP14O95147 198 aaKnown RBP13.58□□□□□ -0.24
RFFL-211ENST00000584541 MEF2BQ02080 365 aaPredicted RBP13.58□□□□□ -0.24
RFFL-211ENST00000584541 ZNF124Q15973 351 aa13.58□□□□□ -0.24
RFFL-211ENST00000584541 OR8A1Q8NGG7 326 aa13.58□□□□□ -0.24
RFFL-211ENST00000584541 EIF5A2Q9GZV4 153 aaKnown RBP13.58□□□□□ -0.24
RFFL-211ENST00000584541 TUBA4BQ9H853 241 aa13.58□□□□□ -0.24
RFFL-211ENST00000584541 EPDR1Q9UM22 224 aa13.58□□□□□ -0.24
RFFL-211ENST00000584541 A0A0J9YX75 114 aa13.57□□□□□ -0.24
RFFL-211ENST00000584541 LOC102723971A0A1B0GUV8 181 aa13.57□□□□□ -0.24
RFFL-211ENST00000584541 F6UB75 175 aa13.57□□□□□ -0.24
RFFL-211ENST00000584541 HLA-DRB4P13762 266 aa13.57□□□□□ -0.24
RFFL-211ENST00000584541 DEFB1P60022 68 aa13.57□□□□□ -0.24
RFFL-211ENST00000584541 HIST1H1AQ02539 215 aaPredicted RBP13.57□□□□□ -0.24
RFFL-211ENST00000584541 CCDC28AQ8IWP9 274 aa13.57□□□□□ -0.24
RFFL-211ENST00000584541 HIST1H2BAQ96A08 127 aa13.57□□□□□ -0.24
RFFL-211ENST00000584541 FAM210AQ96ND0 272 aa13.57□□□□□ -0.24
RFFL-211ENST00000584541 ATG101Q9BSB4 218 aa13.57□□□□□ -0.24
RFFL-211ENST00000584541 SRD5A3Q9H8P0 318 aa13.57□□□□□ -0.24
RFFL-211ENST00000584541 AURKAIP1Q9NWT8 199 aaPredicted RBP13.57□□□□□ -0.24
RFFL-211ENST00000584541 HLA-DRB4X5D2U9 266 aa13.57□□□□□ -0.24
RFFL-211ENST00000584541 RBAKDNA6NC62 111 aa13.56□□□□□ -0.24
RFFL-211ENST00000584541 PRAC2D3DTV9 90 aa13.56□□□□□ -0.24
RFFL-211ENST00000584541 TCRAP04437 139 aa13.56□□□□□ -0.24
RFFL-211ENST00000584541 GNG5P63218 68 aa13.56□□□□□ -0.24
RFFL-211ENST00000584541 TOR2AQ5JU69 321 aa13.56□□□□□ -0.24
RFFL-211ENST00000584541 GOLT1AQ6ZVE7 132 aa13.56□□□□□ -0.24
RFFL-211ENST00000584541 IGKV2-40A0A087WW87 121 aaPredicted RBP13.55□□□□□ -0.24
RFFL-211ENST00000584541 H3BMM0 161 aa13.55□□□□□ -0.24
RFFL-211ENST00000584541 PEX7O00628 323 aa13.55□□□□□ -0.24
RFFL-211ENST00000584541 PDE6DO43924 150 aa13.55□□□□□ -0.24
RFFL-211ENST00000584541 IGKV2D-40P01614 121 aaPredicted RBP13.55□□□□□ -0.24
RFFL-211ENST00000584541 ZNF705DP0CH99 300 aaPredicted RBP13.55□□□□□ -0.24
RFFL-211ENST00000584541 ZNF705BP0CI00 300 aaPredicted RBP13.55□□□□□ -0.24
RFFL-211ENST00000584541 PRB4P10163 310 aaPredicted RBP13.55□□□□□ -0.24
RFFL-211ENST00000584541 ZNF506Q5JVG8 444 aa13.55□□□□□ -0.24
RFFL-211ENST00000584541 GDF5OSQ5U4N7 250 aa13.55□□□□□ -0.24
RFFL-211ENST00000584541 CYB561D1Q8N8Q1 229 aa13.55□□□□□ -0.24
RFFL-211ENST00000584541 OR4B1Q8NGF8 309 aa13.55□□□□□ -0.24
RFFL-211ENST00000584541 PPP1R14DQ9NXH3 145 aa13.55□□□□□ -0.24
RFFL-211ENST00000584541 CNN1P51911 297 aaKnown RBP13.54□□□□□ -0.24
RFFL-211ENST00000584541 TMEM78Q5T7P6 136 aa13.54□□□□□ -0.24
RFFL-211ENST00000584541 LINC00477Q96M19 166 aa13.54□□□□□ -0.24
RFFL-211ENST00000584541 CITED4Q96RK1 184 aa13.54□□□□□ -0.24
RFFL-211ENST00000584541 RARRES2Q99969 163 aa13.54□□□□□ -0.24
RFFL-211ENST00000584541 AGRNO00468 2067 aa13.54□□□□□ -0.24
RFFL-211ENST00000584541 FBLL1A6NHQ2 334 aaKnown RBP13.53□□□□□ -0.24
RFFL-211ENST00000584541 NPIPB6E9PJ23 425 aa13.53□□□□□ -0.24
RFFL-211ENST00000584541 IGKV3-20P01619 116 aa13.53□□□□□ -0.24
RFFL-211ENST00000584541 PRB2P02812 416 aaPredicted RBP13.53□□□□□ -0.24
RFFL-211ENST00000584541 IGHV4-30-4P0DP06 118 aa13.53□□□□□ -0.24
RFFL-211ENST00000584541 AKR1C3P42330 323 aa13.53□□□□□ -0.24
RFFL-211ENST00000584541 PEA15Q15121 130 aa13.53□□□□□ -0.24
RFFL-211ENST00000584541 C9orf47Q6ZRZ4 202 aa13.53□□□□□ -0.24
RFFL-211ENST00000584541 TRPT1Q86TN4 253 aaKnown RBP13.53□□□□□ -0.24
RFFL-211ENST00000584541 CLUHP3Q96NS8 147 aa13.53□□□□□ -0.24
RFFL-211ENST00000584541 LOC102724200A0A096LPH7 203 aaPredicted RBP13.52□□□□□ -0.25
RFFL-211ENST00000584541 SCO2A0A1W2PP80 73 aa13.52□□□□□ -0.25
RFFL-211ENST00000584541 NUTF2P61970 127 aaKnown RBP13.52□□□□□ -0.25
RFFL-211ENST00000584541 ERCC8Q13216 396 aa13.52□□□□□ -0.25
RFFL-211ENST00000584541 TMEM75Q8N9X5 138 aa13.52□□□□□ -0.25
RFFL-211ENST00000584541 VGLL1Q99990 258 aa13.52□□□□□ -0.25
RFFL-211ENST00000584541 A8MZ25 164 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms