RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ERBINQ96RT1 1412 aa0.78□□□□□ -2.28
SMARCE1-219ENST00000583294 CST7O76096 145 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 MT-ND6P03923 174 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 RPL35P42766 123 aaKnown RBP0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 TCTAP57738 103 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 MIR22HGQ0VDD5 57 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 VMA21Q3ZAQ7 101 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 FOXI2Q6ZQN5 318 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 STX19Q8N4C7 294 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 NEK7Q8TDX7 302 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 PLEKHB2Q96CS7 222 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 LIMD2Q9BT23 127 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 MED11Q9P086 117 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 HSPB8Q9UJY1 196 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 NISCHQ9Y2I1 1504 aa0.77□□□□□ -2.29
SMARCE1-219ENST00000583294 PTPRDP23468 1912 aa0.76□□□□□ -2.29
SMARCE1-219ENST00000583294 SPINK9Q5DT21 86 aa0.76□□□□□ -2.29
SMARCE1-219ENST00000583294 PHF5AQ7RTV0 110 aaKnown RBP0.76□□□□□ -2.29
SMARCE1-219ENST00000583294 BORCS8Q96FH0 119 aa0.76□□□□□ -2.29
SMARCE1-219ENST00000583294 PIK3C2AO00443 1686 aa0.75□□□□□ -2.29
SMARCE1-219ENST00000583294 TMEM238C9JI98 176 aa0.75□□□□□ -2.29
SMARCE1-219ENST00000583294 FXYD4P59646 89 aa0.75□□□□□ -2.29
SMARCE1-219ENST00000583294 DIAPH2-AS1Q14236 149 aa0.75□□□□□ -2.29
SMARCE1-219ENST00000583294 OCIAD2Q56VL3 154 aa0.75□□□□□ -2.29
SMARCE1-219ENST00000583294 FAM24BQ8N5W8 94 aa0.75□□□□□ -2.29
SMARCE1-219ENST00000583294 DYDC1Q8WWB3 177 aa0.75□□□□□ -2.29
SMARCE1-219ENST00000583294 CARD19Q96LW7 228 aa0.75□□□□□ -2.29
SMARCE1-219ENST00000583294 OTORQ9NRC9 128 aa0.75□□□□□ -2.29
SMARCE1-219ENST00000583294 FRAS1Q86XX4 4008 aa0.74□□□□□ -2.29
SMARCE1-219ENST00000583294 USP24Q9UPU5 2620 aa0.74□□□□□ -2.29
SMARCE1-219ENST00000583294 A0A0D9SG42 100 aa0.74□□□□□ -2.29
SMARCE1-219ENST00000583294 TRBV30A0A0K0K1B3 111 aa0.74□□□□□ -2.29
SMARCE1-219ENST00000583294 CST11Q9H112 138 aa0.74□□□□□ -2.29
SMARCE1-219ENST00000583294 NIT2Q9NQR4 276 aa0.74□□□□□ -2.29
SMARCE1-219ENST00000583294 TPRKBQ9Y3C4 175 aa0.74□□□□□ -2.29
SMARCE1-219ENST00000583294 NAV3Q8IVL0 2385 aa0.74□□□□□ -2.29
SMARCE1-219ENST00000583294 BCL9O00512 1426 aa0.73□□□□□ -2.29
SMARCE1-219ENST00000583294 ZNF727A8MUV8 499 aa0.73□□□□□ -2.29
SMARCE1-219ENST00000583294 H3BQV1 296 aa0.73□□□□□ -2.29
SMARCE1-219ENST00000583294 K7EIL1 84 aa0.73□□□□□ -2.29
SMARCE1-219ENST00000583294 G0S2P27469 103 aa0.73□□□□□ -2.29
SMARCE1-219ENST00000583294 ZCCHC23Q6ZST2 131 aa0.73□□□□□ -2.29
SMARCE1-219ENST00000583294 Q86TA4 180 aa0.73□□□□□ -2.29
SMARCE1-219ENST00000583294 RTL9Q8NET4 1388 aa0.72□□□□□ -2.29
SMARCE1-219ENST00000583294 APCP25054 2843 aa0.72□□□□□ -2.29
SMARCE1-219ENST00000583294 KPNA4O00629 521 aaPredicted RBP0.72□□□□□ -2.29
SMARCE1-219ENST00000583294 SERPINB1P30740 379 aa0.72□□□□□ -2.29
SMARCE1-219ENST00000583294 PPP1R2P3Q6NXS1 205 aa0.72□□□□□ -2.29
SMARCE1-219ENST00000583294 C3orf33Q6P1S2 294 aa0.72□□□□□ -2.29
SMARCE1-219ENST00000583294 OR4C12Q96R67 309 aa0.72□□□□□ -2.29
SMARCE1-219ENST00000583294 BIN3Q9NQY0 253 aa0.72□□□□□ -2.29
SMARCE1-219ENST00000583294 BOKQ9UMX3 212 aaPredicted RBP0.72□□□□□ -2.29
SMARCE1-219ENST00000583294 KNTC1P50748 2209 aa0.71□□□□□ -2.3
SMARCE1-219ENST00000583294 IGHV3-33P01772 117 aa0.71□□□□□ -2.3
SMARCE1-219ENST00000583294 CRYBA4P53673 196 aa0.71□□□□□ -2.3
SMARCE1-219ENST00000583294 FOXA3P55318 350 aaPredicted RBP0.71□□□□□ -2.3
SMARCE1-219ENST00000583294 ANGPTL5Q86XS5 388 aa0.71□□□□□ -2.3
SMARCE1-219ENST00000583294 TAF9BQ9HBM6 251 aa0.71□□□□□ -2.3
SMARCE1-219ENST00000583294 NAT8BQ9UHF3 227 aa0.71□□□□□ -2.3
SMARCE1-219ENST00000583294 ADGBQ8N7X0 1667 aa0.71□□□□□ -2.3
SMARCE1-219ENST00000583294 TECPR2O15040 1411 aa0.71□□□□□ -2.3
SMARCE1-219ENST00000583294 ASH1LQ9NR48 2969 aaKnown RBP0.7□□□□□ -2.3
SMARCE1-219ENST00000583294 FABP2P12104 132 aa0.7□□□□□ -2.3
SMARCE1-219ENST00000583294 FABP4P15090 132 aa0.7□□□□□ -2.3
SMARCE1-219ENST00000583294 SPINT3P49223 89 aa0.7□□□□□ -2.3
SMARCE1-219ENST00000583294 Q6ZQY7 126 aa0.7□□□□□ -2.3
SMARCE1-219ENST00000583294 LINC00299Q6ZSB3 139 aa0.7□□□□□ -2.3
SMARCE1-219ENST00000583294 PRR15Q8IV56 129 aa0.7□□□□□ -2.3
SMARCE1-219ENST00000583294 LINC00269Q8N2A0 174 aa0.7□□□□□ -2.3
SMARCE1-219ENST00000583294 EFCAB11Q9BUY7 163 aa0.7□□□□□ -2.3
SMARCE1-219ENST00000583294 LAMTOR3Q9UHA4 124 aa0.7□□□□□ -2.3
SMARCE1-219ENST00000583294 RPL37AP61513 92 aaKnown RBP0.69□□□□□ -2.3
SMARCE1-219ENST00000583294 NEDD8Q15843 81 aa0.69□□□□□ -2.3
SMARCE1-219ENST00000583294 TRIQKQ629K1 86 aa0.69□□□□□ -2.3
SMARCE1-219ENST00000583294 LRTM1Q9HBL6 345 aa0.69□□□□□ -2.3
SMARCE1-219ENST00000583294 NUBP2Q9Y5Y2 271 aa0.69□□□□□ -2.3
SMARCE1-219ENST00000583294 TRDV1A0A1B0GX56 115 aa0.68□□□□□ -2.3
SMARCE1-219ENST00000583294 SYNMO15061 1565 aa0.68□□□□□ -2.3
SMARCE1-219ENST00000583294 GNG10P50151 68 aa0.68□□□□□ -2.3
SMARCE1-219ENST00000583294 MRPS36P82909 103 aaKnown RBP0.68□□□□□ -2.3
SMARCE1-219ENST00000583294 OR4B1Q8NGF8 309 aa0.68□□□□□ -2.3
SMARCE1-219ENST00000583294 BOLA2Q9H3K6 86 aa0.68□□□□□ -2.3
SMARCE1-219ENST00000583294 YTHDC2Q9H6S0 1430 aaKnown RBP0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 MAP1LC3B2A6NCE7 125 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 C5orf58C9J3I9 102 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 E5RI56 91 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 PPP5D1E7EU14 171 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 GABARAPH6UMI1 98 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 ZNF137PP52743 207 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 C6orf52Q5T4I8 152 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 DCUN1D2Q6PH85 259 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 MCEEQ96PE7 176 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 CCL19Q99731 98 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 IL20Q9NYY1 176 aa0.67□□□□□ -2.3
SMARCE1-219ENST00000583294 KIAA1107Q9UPP5 1409 aa0.66□□□□□ -2.3
SMARCE1-219ENST00000583294 H7BYZ3 331 aa0.66□□□□□ -2.3
SMARCE1-219ENST00000583294 KDELR1P24390 212 aa0.66□□□□□ -2.3
SMARCE1-219ENST00000583294 CASC2Q6XLA1 102 aa0.66□□□□□ -2.3
SMARCE1-219ENST00000583294 ATOH7Q8N100 152 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms